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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7510 cluster # 7510       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7510#0 length = 686 sequences # 5  

consensusID : consensus_7510#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 686
fasta sequence
                              [TTTTATGTGTGTTTCAGTAATAGATTACGTAAAAAAACAAAATGAACAACAACATTTACAATTTATTCACTATCACACAGAATGAAATTATTTCGAACTTTTCCAACACTTGATTGATAAAAGAANCATAAACTACCAGTTTGTTTTTGCTTTATAGCCATTTCTATTCGTGGTCAAATGATTCGATTAATTTATACGTGATAAGAAGTAAGCCTTATTTGAAAACACCTTGAAGAGTGAACTCTTTTTTTGTAAATCTAAGCTGCTTAAGGAAACTTAGACAACAAGTATAAAAGACTATCACCTTCTTCATCCTCCTTCAAGTAATCGATTATATCAAAACAACTAAAAAAGATTAAATTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATTATATTGTTCTTCCAGTTTCTTTTTTTCCTTGTTTATTATTCTAAAAACAGAACCACGAAAATAGAGGGAAAGAATACGAAACAAAGAAGAAAACAAAAACAACCGTAAAGTAGTAAAATAAAACAGGAGAGAAACCGGCAAAAAACAAAAACGCCAAAATAAAAACAAGTAAATAAAAGATAAAACCAAATGCGCAGCACACAGCAGCTATGAATGAGATGCAAAATGTAAACTACTCTTGTTTTTTCTATTATTTTAACAAATAA]

[+] EMBL CD121141             [TTTTATGTGTGTTTCAGTAATAGATTACGTAAAAAAACAAAATGAACAACAACATTTACAATTTATTCACTATCACACAGAATGAAATTATTTCGAACTTTTCCAACACTTGATTGATAAAAGAAACATAAACTAACAGCTTGTTTTTGCTTTATAGCCATTTCTATTCGTGGTCAAATGATTCGATTAATTTATACGTGATAAGAAGTAAGCCTTATTTGAAAACACCTTGAAGAGTGAACTCTTTTTTTGTAAATCTAAGCTGCTTAAGGAAACTTAGACAACAAGTATAAAAGACTATCACCTTCTTCATCCTCCTTCAAGTAATCGATTATATCAAAACAACTAAAAAAGATTAAATTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATTTTATTGTTCTTCCAGTTTCTTTTTTTCCTTGNTTATTATTCTAAAAACAGAACCACGAANATAGAGGGAAAGAATACGAAACAAAGAAGAAAACANAAACAACCGTANAGTAGTAAAATAAAACAGGAGAGAAACCGGC AAAAACAAAAACGCC AAATAAA                                                                                                       ]
[-] EMBL CD121264             [                                                                                                                  TGATAAAAGAANCATAAACTACCAGTTTGTTTTTGCTTTATAGCCATTTCTATTCGTGGTCAAATGATTCGATTAATTTATACGTGATAAGAAGTAAGCCTTATTTGAAAACACCTTGAAGAGTGAACTCTTTTTTTGTAAATCTAAGCTGCTTAAGGAAACTTAGACAACAAGTATAAAAGACTATCACCTTCTTCATCCTCCTTCAAGTAATCGATTATACCAAAACAACTAAAAAAGATTAAATTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATTATATTGTTCTTCCAGTTTCTTTTTTTCCTTGTTTATTATTCTAAAAACAGAACCACGAAAATAGAGGGAAAGAATACGAAACAAAGAAGAAAACAAAAACAACCGTAAAGTAGTAAAATAAAACAGGAGAGAAACCGGCAAAAAACAAAAACGCCAAAATAAAAACAAGTAAATAAAAGATAAAACCAAATGCGCAGCACACAGCAGCTATGAATGAGATGCAAAATGTAAACTACTCTTGTTTTTTCTATTATTTTAACAAATAA]
[-] EMBL CD121200             [                                                                                                                             NCATAANCTACCAGTTTGTTTNTGCTTTATAGCCATTTCTATTCGTGGTCAAATGATTCGATTAATTTATACGTGATAAGAAGTAAGCCTTATTTGAAAACACCTTGAAGAGTGAACTCTTTTTTTGTAAATCTAAGCTGCTTAAGGAAACTTAGACAACAAGTATAAAAGACTATCACCTTCTTCATCCTCCTTCAAGTAATCGATTATATCAAAACAACTAAAAAAGATTAAATTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATTATATTGTTCTTCCAGCTTCTTTTTTTCCTTGTTTATTATTCTAAAAACAGAACCACGAAAATAGAGGGAAAGAATACGAAACAAAGAAGAAAACAAAAACAACCGTAAAGTAGTAAAATAAAACAGGAGAGAAACCGGCAAAAAACAAAAACGCCAAAATAAAAACAAGTAAATAAAAGATAAAACCAAATGCGCAGCACACAGCAGCTATGAATGAGATGCAAAATGTAAACTACTCTTGTTTTTTCTATTATTTTAACAAATAA]
[-] EMBL CD121184             [                                                                                                                                                         ATAGCCATTTCTATTCGTGGTCAAATGATTCGATTAATTTATACGTGATAAGAAGTAAGCCTTATTTGAAAACACCTTGAAGAGTGAACTCTTTTTTTGTAAATCTAAGCTGCTTAAGGAAACTTAGACAACAAGTATAAAAGACTATCACCTTCTTCATCCTCCTTCAAGTAATCGATTATATCAAAACAACTAAAAAAGATTAAATTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATTATATTGTTCTTCCAGTTTCTTTTTTTCCTTGTTTATTATTCTAAAAACAGAACCACGAAAATAGAGGGAAAGAATACGAAACAAAGAAGAAAACAAAAACAACCGTAAAGTAGTAAAATAAAACAGGAGAGAAACCGGCAAAAAACAAAAACGCCAAAATAAAAACAAGTAAATAAAAGATAAAACCAAATGCGCAGCACACAGCAGCTATGAATGAGATGCAAAATGTAAACTACTCTTGTTTTTTCTATTATTTTAACAAATAA]
[+] EMBL CD190813             [                                                                                                                                                                                                                                                                                                                               TCAAGTAATCGATTATATCAAAACAACTAAAAAAGATTAAATTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATTATATTGTTCTTCCAGTTTCTTTTTCTCCTTGTTTATTATTCTAAAAACAGAACCACGAAAATAGAGGGAAAGAATACGAAACAAAGAAGAAAACAAAAACAACCGTAAAGTAGTAAAATAAAACAGGAGAGAAACCGGCAAAAAATAAAAACGCCAAAATAAAAACAAGTAAATAAAAGATAAAACCAAATGCGCAGCACACAGCAGCTATGAATGAGACGCAAAATGTAAACTACTCTTGTTTTTTCTA                ]


>consensus_7510#0 TTTTATGTGTGTTTCAGTAATAGATTACGTAAAAAAACAAAATGAACAACAACATTTACA ATTTATTCACTATCACACAGAATGAAATTATTTCGAACTTTTCCAACACTTGATTGATAA AAGAANCATAAACTACCAGTTTGTTTTTGCTTTATAGCCATTTCTATTCGTGGTCAAATG ATTCGATTAATTTATACGTGATAAGAAGTAAGCCTTATTTGAAAACACCTTGAAGAGTGA ACTCTTTTTTTGTAAATCTAAGCTGCTTAAGGAAACTTAGACAACAAGTATAAAAGACTA TCACCTTCTTCATCCTCCTTCAAGTAATCGATTATATCAAAACAACTAAAAAAGATTAAA TTGAAAGACAAATTTCAATATCAATGATAAATCTAATGTTTTTGTTTTGTTTCTCACATT ATATTGTTCTTCCAGTTTCTTTTTTTCCTTGTTTATTATTCTAAAAACAGAACCACGAAA ATAGAGGGAAAGAATACGAAACAAAGAAGAAAACAAAAACAACCGTAAAGTAGTAAAATA AAACAGGAGAGAAACCGGCAAAAAACAAAAACGCCAAAATAAAAACAAGTAAATAAAAGA TAAAACCAAATGCGCAGCACACAGCAGCTATGAATGAGATGCAAAATGTAAACTACTCTT GTTTTTTCTATTATTTTAACAAATAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)