Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7708 cluster # 7708       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7708#0 length = 1113 sequences # 5  

consensusID : consensus_7708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1113
fasta sequence
                              [CTCGAGGCCAAAAATTCGGCACGAGGACGTCTTTCGAGGTCATTATGTCCAATGTAAAACCGAAGAGTGCGTCAGATATTTTTTGTGATGCACATGCTTTGCATGTAGTTGACACAAGCAGAGCCAAAGATGGAGTCTGGTTAGTCAAAGTTCCCAAATATTTAGCTGAACTTTGGCATAATGCTGGCTCTGATGGTGTAGTTGGGAAAGTTGTGATCGCAAGTTCAACTAGTGCATCTCAGAATGGCAACAAAGGCCCAGGGTCACAGGTCACTCTTGTTACTGACTCAGAACTATTAAATCAAGTTGGAGAGTCTGGAAATCTGATACCAAAGGAACATCAGTTTCTGATTCAAACTTCTGCATCATCAAATAGTACACCTGGGACTGTTCGCCCAGGTCAGACTACTCCAAGTTCGACAGTTCAAAGGCGTACTGGGGCTATATCTGGACAAGAACTCATAATCTTATGTGAAGACGACCTTGGATGTGCTCAAACCAACTCGTTTCCATCTTCGACGAGCAACACAACTTTAACTTCCTCTGCAGCCCCACCTTCTCCATTCTCAAATAAACCGTACGCTCGTTACTCTCGGCGACTATCTTTGTTTGGCCGTGTTAATAGTCGAGCTGAATGCAGACCACCGCCTAATACAAGATATATGATGCTCAAAGCTCAACAGCTCAAAGCAAAGAATCGACCGCGACATGAAGTCTGTCTCCTTTATGAACCAGTAAGAAACTACAAACCAGTTTCCAATCATGTCAACAATATCGAGTATGAAAATCGGAAAAAGGTTGAGGGTAAAAATCTTAGACGTGAAAAAGAAGACGTTTTGCAGGATTTGTTCAAAGCTTTCGAAAGACATCAATATTACTCTATTAAAGATTTGGTTGTACTTACTAAGCAACCATTGGCCTATCTTACAGAGATACTGAAGGAAATTGCTATCTTTAACACTCACATTCCACACAAAAATATGTGGGAGTTGAAACCTGAATACAGACATTATACACAGCCTGAGAATAAAACTGAATCCAACACGGAATAAACCACGTAAACGTACACCAATTTGTAAATTAATAAAAGCGTTCTTCCCTGTAAAAAAAAAA]

[+] EMBL CD080562             [CTCGAGGCCAAAAATTCGGCACGAGGACGTCTTTCGAGGTCATTATGTCCAATGTAAAACCGAAGAGTGCGTCAGATATTTTTTGTGATGCACATGCTTTGCATGTAGTTGACACAAGCAGAGCCAAAGATGGAGTCTGGTTAGTCAAAGTTCCCAAATATTTAGCTGAACTTTGGCATAATGCTGGCTCTGATGGTGTAGTTGGGAAAGTTGTGATCGCAAGTTCAACTAGTGCATCTCAGAATGGCAACAAAGGCCCAGGGTCACAGGTCACTCTTGTTACTGACTCAGAACTATTAAATCAAGTTGGAGAGTCTGGAAATCTGATACCAAAGGAACATCAGTTTCTGATTCAAACTTCTGCATCATCAAATAGTACACCTGGGACTGTTCGCCCAGGTCAGACTACTCCAAGTTCGACAGTTCAAAGGCGTACTGGGGCTATATCTGGACAAGAACTCATAATCTTATGTGAAGACGACCTTGGATGTGCTCAAACCAACTCGTTTCCATCTTCGACGAGCAACACAACTTTAACTTCCTCTGCAGCCCCACCTTCTCCATTCTCAAATAAACCGTACGCTCGTTACTCTCGGCGACTATCTTTGTTTGGCCGTGTTAATAGTCGAGCTGAATGCAGACCACCGCCTAATACAAGATATATGATGCTCAAAGCTCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD198552             [                                                                                                                                                                                                            GGAAAGTTGTGATCGCAAGTTCAACTAGTGCATCTCAGAATGGCAACAAAGGCCCAGGTTCACAGGTCACTCTTGTTACTGACTCAGAACTATTAAATCAAGTTGGAGAGTCTGGAAATCTGATACCAAAGGAACATCAGTTTCTGATTCAAACTTCTGCATCATCAAATAGTACACCTGGGACTGTTCGCCCAGGTCAGACTACTCTAAGTTCGACAGTTCAAAGGCGTACTGGGGCTATATCTGGACAAGAACTCATAATCTTATGTGAAGACGACCTTGGATGTGCTCAAACCAACTCGTTTCCATCTTCGACGAGCAACACAACTTTTACTTCCTCTGCAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD077831             [                                                                                                                                                                                                                                                                                                                                                                                                          CCCAGGCCTGACTACTCCAAGCTCGACAGTTCAAAGGCGCACTGGGGCTATATCTGGACAAGAACTCATAATCTTATGTGAAGACGACCTTGGATGTGCTCAAACCAACTCGTTTCCATCTTCGACGAGCAACACAACTGTAACTTCCTCTGCAGCCCCACCTTCTCCATTCTCAAATAAACCGTACGCTCGTTACTCTCGGCGACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD059590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCTGAATGCAGACCACCGCCTAATACAAGATATATGATGCTCAAAGCTCAACAGCTCAAAGCAAAGAATCGACCGCGACATGAAGTCTGTCTCCTTTATGAACCAGTAAGAAACTACAAACCAGTTTCCAATCATGTCAACAATATCGAGTATGAAAATCGGAAAAAGGTTGAGGGTAAAAATCTTAGACGTGAAAAAGAAGACGTTTTGCAGGATTTGTTCAAAGCTTTCGAAAGACATCAATATTACTCTATTAAAGATTTGGTTGTACTTACTAAGCAACCATTGGCCTATCTTACAGAGATACTGAAGGAAAT                                                                                                                                                                       ]
[-] EMBL AI395561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGAGGGT AAAATCTTAGACGTGAAAAAGAAG CGTTTTGCAGGATTTGTTCAAAGCTTTCGAAAGACATCAATATTACTCTATTAAAGATTTGGTTGTACTTACTAAGCAACCATTGGCCTATCTTACAGAGATACTGAAGGAAATTGCTATCTTTAACACTCACATTCCACACAAAAATATGTGGGAGTTGAAACCTGAATACAGACATTATACACAGCCTGAGAATAAAACTGAATCCAACACGGAATAAACCACGTAAACGTACACCAATTTGTAAATTAATAAAAGCGTTCTTCCCTGTAAAAAAAAAA]


>consensus_7708#0 CTCGAGGCCAAAAATTCGGCACGAGGACGTCTTTCGAGGTCATTATGTCCAATGTAAAAC CGAAGAGTGCGTCAGATATTTTTTGTGATGCACATGCTTTGCATGTAGTTGACACAAGCA GAGCCAAAGATGGAGTCTGGTTAGTCAAAGTTCCCAAATATTTAGCTGAACTTTGGCATA ATGCTGGCTCTGATGGTGTAGTTGGGAAAGTTGTGATCGCAAGTTCAACTAGTGCATCTC AGAATGGCAACAAAGGCCCAGGGTCACAGGTCACTCTTGTTACTGACTCAGAACTATTAA ATCAAGTTGGAGAGTCTGGAAATCTGATACCAAAGGAACATCAGTTTCTGATTCAAACTT CTGCATCATCAAATAGTACACCTGGGACTGTTCGCCCAGGTCAGACTACTCCAAGTTCGA CAGTTCAAAGGCGTACTGGGGCTATATCTGGACAAGAACTCATAATCTTATGTGAAGACG ACCTTGGATGTGCTCAAACCAACTCGTTTCCATCTTCGACGAGCAACACAACTTTAACTT CCTCTGCAGCCCCACCTTCTCCATTCTCAAATAAACCGTACGCTCGTTACTCTCGGCGAC TATCTTTGTTTGGCCGTGTTAATAGTCGAGCTGAATGCAGACCACCGCCTAATACAAGAT ATATGATGCTCAAAGCTCAACAGCTCAAAGCAAAGAATCGACCGCGACATGAAGTCTGTC TCCTTTATGAACCAGTAAGAAACTACAAACCAGTTTCCAATCATGTCAACAATATCGAGT ATGAAAATCGGAAAAAGGTTGAGGGTAAAAATCTTAGACGTGAAAAAGAAGACGTTTTGC AGGATTTGTTCAAAGCTTTCGAAAGACATCAATATTACTCTATTAAAGATTTGGTTGTAC TTACTAAGCAACCATTGGCCTATCTTACAGAGATACTGAAGGAAATTGCTATCTTTAACA CTCACATTCCACACAAAAATATGTGGGAGTTGAAACCTGAATACAGACATTATACACAGC CTGAGAATAAAACTGAATCCAACACGGAATAAACCACGTAAACGTACACCAATTTGTAAA TTAATAAAAGCGTTCTTCCCTGTAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)