Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 7821 cluster # 7821       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7821#0 length = 495 sequences # 5  

consensusID : consensus_7821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 495
fasta sequence
                              [TTGCAAATACTTTCTCCACCAA-TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCACCAAAACATCTGCTTA]

[+] EMBL CD065677             [TTGCAAATACTTTCT CA CAA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGGGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGT                                                                                                                                                                                                                                                                   ]
[+] EMBL CD065576             [          TTTCTCCACCAA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGACAAGCGCACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCACCAAAACATCTGCTTA]
[+] EMBL CD065584             [          TTTCTCCACCAA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAGAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCACCAAA           ]
[-] EMBL CD065625             [           TTCTCCACCGA TCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGACTTCATTGAGACCCATTACCTGAATGAGCGGGTGAAGTCCATCAAAGAACTGGGTGACCACGTGACCAACTTACGCAAGATGGGAGCCCCAGAAACTGGCATGGCAGAATATCTCTTTGACAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCTCACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTAT AGTCCACCAAA           ]
[+] EMBL CD065646             [                   CAACTCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAAGCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGATGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGGGTGTGAATCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGT                                                                                                                                                                                                                                                                   ]


>consensus_7821#0 TTGCAAATACTTTCTCCACCAATCCCATGAGGAGAGGGAGCATGCTGAGAAACTGATGAA GCTGCAGAACCAGCGAGGTGGCCGGATCTTCCTGCAGGATATCAAGAAACCAGACCGTGA TGACTGGGAGAGCGGGCTGAACGCTATGGAGTGTGCACTGCACTTGGAAAAGAGTGTGAA TCAGTCACTACTGGAGCTGCACAAACTGGCCACTAACAAAAATGACCCCCACTTGTGTGA CTTCATTGAGACCCATTACCTGAATGAGCAGGTGAAGTCCATCAAAGAACTGGGTGACCA CGTGACCAACTTACGCAAGATGGGAGCCCCTGAAACTGGCATGGCAGAATATCTCTTTGA CAAGCACACCCTGGGACACAGTGAGAGCTAAGCTGTCCTCCCCAAAGCCACCAGTGACCT CACTGGTCACTGAGGCAGTGCATGCATGTCAGGCTGCCCTTACCTTTTCTATAAGTCCAC CAAAACATCTGCTTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)