These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1140 fasta sequence [CTGGAACAAATACAAAAGATTAGTGAAGAACGGCGACAAAAGAAGGCTTTGATGAAAATCCTGCAAACACCACAAGAGAAACGAGCCAGACGTTTAGCTAAAAAAGAAGCTAAAGAACGTTGGAGACGCGAACGAATGGGATGGGATAAAGAGTATTTAGGTTATACAAATGAAGATAATCCATTCGGTGATCATCGTCTTTCTGAATCATTTGTCTGGAAACGGAAATTAGAAAGACAAGGATTGTCACATTTATCCAAAGAGGATCTTCAAGTCTTACAAAAAAAGAAAATGCAAGAGAATAAAATGGAATTGGAAGCTGTTCGACGTAGACGTATTGAAAGAGAACGAGAA-CGTGAACAGCATGAG-AAAG-AAAT-GGAAATGAT-GCAACGAGAT-AAAG-AAGCAG-AATATTATCGATCAT-GGGAACAACAAG-AAGACAGTTTCCATTTACAACAAGCTAAATTACGTTCTCG-TATTCGTATTGCTGATGGACGTGCCAAACCAATTGATTTGTTAGCAAAATATATAGCTGATCAAGAGGAAGATCCAATGGAGTTTGAAATATCAGGTGTAGTGGAAATTTTGGAACCGACACAATTTCTTGTTGGCTTAGGTATAGAAGATT-TAGAAGATTTACTTGAAGATATTAAGGTAGTGTATATGGAATTAGAAAAAGGTTGTAATGCAGAATATTGGCGTGATATTACAACTGTTGTTGAAGATGAATTAAATAAATTGCGTCGATTAGAAGAAAATAGCGGAGTAGCTGGTGCATGCGGTGCCGATACCAGAGGTCGTAGTTCGGCTACTATTAGTCAGTCTGTTATGCAAAGTGTTGCGGAAACGTTAAAAGGCAAAACATACAATCAATTAAGTGCATTAGAGAAACAAATTGCTCCAAAGCTGCGTGGTGGTGAAGGTGTAGATGTGACTTATTGGGAAACATTAGCTCAATTTGTTCGTGCTCAAATGGCCCGTACTCGTCTACGTGATATGCATCAAAACAATCTTAAACGTAAATTAGAATGTTTACGTCAAGCTCAAGGTATTGTCTCAGAACCATTATTTCCTAGTGCTGCTGTTAAACAGTCAAATGATCGTGTCGAATCGGACATTGAACAACCTACCTATGCACAATNC] [+] EMBL CD153343 [CTGGAACAAATACAAAAGATTAGTGAAGAACGGCGACAAAAGAAGGCTTTGATGAAAATCCTGCAAACACCACAAGAGAAACGAGCCAGACGTTTAGCTAAAAAAGAAGCTAAAGAACGTTGGAGACGCGAACGAATGGGATGGGATAAAGAGTATTTAGGTTATACAAATGAAGATAATCCATTCGGTGATCATCGTCTTTCTGAATCATTTGTCTGGAAACGGAAATTA ] [+] EMBL CD201493 [ TTCGGTGATCATCGTCTTTCTGAATCATTTGTCTGGAAACGGAAATTAGAAAGACAAGGATTGTCACATTTATCCAAAGAGGATCTTCAAGTCTTACAAAAAAAGAAAATGCAAGAGAATAAAATGGAATTGGAAGCTGTTCGACGTAGACGTATTGAAAGAGAACGAGAA CGTGAACAGCATGAG AAAG AAAT GGAAATGAT GCAACGAGAT AAAG AAGCAG AATATTATCGATCAT GGGAACAACAAG AAGACAGTTTCCATTTACAACAAGCTAAATTACGTTCTCG TATTCGTATTGCTGATGGACGTGCCAAACCAATTGATTTGTTAGCAAAATATATAGCTGATCAAGAGGAAGATCCAATGGAGTTTGAAATATCAGGTGTAGTGGAAATTTTGGAACCGACACAATTTCTTGTTGGCTTAGGTATAGAAGATT TAGAAGATTTACTTGAAGATATTAAGGTAGTGTATATGGAATTAGAAAAAGGTTGTAATGCAGAATATTGGCGTGATATTACAACTGTTGTTGAAGATGAATTAAATAAATTGCGTCGATCAGAtggnn ] [-] EMBL CD126764 [ GAACCGTGAACAGCATGAGAAAAGAAAATGGGAAATGATGGCAACGAGATAAAAGAAAGCAGAAATATAATCGATCATGGGGAACAACAAGAAAGACAGTTTCCATTAACAACAAGCTAAATACCGTTCTCGTTATTCGTATTGCTGATGGACGTGCCAAACCAATTGATTTGTTAGCAANATATATAGCCGATCAAGAGGAAGATCCAATGGAGTTTGAAATATCAGGTGTAGTGGAAGTTTTGGAACCGACACAATTTCTTGTTGGCTTAGGTATAGAAGATT TAGAAGATTTACTTGAAGATATTAAGGTAGTGTATATGGAATTAGAAAAAGGTTGTAATGCAGAATAT GCGTGATA TAC ACTG TG TGAAG ] [+] EMBL CD111071 [ AAG AAGACAGTTTCCATTTACAACAAGCTAAATTACGTTCTCG TATTCGTATTGCTGATGGACGTGCCAAACCAATTGATTTGTTAGCAAAATATATAGCTGATCAAGAGGAAGATCCAATGGAGTTTGAAATATCAGGTGTAGTGGAAATTTTGGAACCGACACAATTTCTTGTTGGCTTAGGTATAGAAGATT TAGAAGATTTACTTGAAGATATTAAGGTAGTGTATATGGAATTAGAAAAAGGTTGTAATGCAGAATATTGGCGTGATATTACAACTGTTGTTGAAGATGAATTAAATAAATTGCGTCGATTAGAAGAAAATAGCGGAGTAGCTGGTGCATGCGGTGCCGATACCAGAGGTCGTAGTTCGGCTACTATTAGTCAGTCTGTTATGCAAAGTGTTGCGGAAACGTTAAAAGGCAAAACATACAATCAATTAAGTGCATTAGAGAAACAAATTGCTCCAAAGCTGCGTGGTGGTGAA ] [+] EMBL CD111383 [ AAG AAGACAGTTCCCATTTACAACAAGCTAAATTACGTTCTCG TATTCGTATTGCTGATGGACGTGCCAAACCAATTGATTTGTTAGCAAAATATATAGCTGATCAAGAGGAAGATCCAATGGAGTTTGAAATATCAGGTGTAGTGGAAATTTTGGAACCGACACAATTTCTTGTTGGCTTAGGTATAGAAGATTCTAGAAGATTTACTTGAAGATATTAAGGTAGTGTATATGGAATTAGAAAAAGGTTGTAATGCAGAATATTGGCGTGATATTACAACTGTTGTTGAAGATGAATTAAATAAATTGCGTCGATTAGAAGAAAATAGCGGAGTAGCTGGTGCATGCGGTGCCGATACCAGAGGTCGTAGTTCGGCTACTATTAGTCAGTCTGTTATGCAAAGTGTT ] [-] EMBL CD127987 [ TGCGGTGCCGATACCAGAGGTCGTAGTTCGGCTACTATTAGTCAGTCTGTTATGCAAAGTGTTGCGGAAACGTTAAAAGGCAAAACATACAATCAATTAAGTGCATTAGAGAAACAAATTGCTCCAAAGCTGCGTGGTGGTGAAGGTGTAGATGTGACTTATTGGGAAACATTAGCTCAATTTGTTCGTGCTCAAATGGCCCGTACTCGTCTACGTGATATGCATCAAAACAATCTTAAACGTAAATTAGAATGTTTACGTCAAGCTCAAGGTATTGTCTCAGAACCATTATTTCCTAGTGCTGCTGTTAAACAGTCAAATGATCGTGTCGAATCGGACATTGAACAACCTACCTATGCACAATNC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||