These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8114#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 705 fasta sequence [AATTTATTAACTGTTTATAAACTCTTCCATTCATTATCGCATATGGTAGATCGAACAATCTGACAAAAATAACATAATCAGAGGGTTATAGTAATCGCTTCAAGTTGACTTTAAGCCGAAATACATAGGAATTGAAGAGAAAATACAAAAGTGAACAACGACAAAAATTAAACAAATATACAAGGTCACCTAAATGAGATCTGAAAATAAAGAGAATATTGGTACGTGAAACTGATGGGCATAGGAAAGATCTCCCTACAACGGAAGTACAAAATAATAAATATTCCAGATAAGCTAAACAAGAAAAGTAATTTTACTATTCACAATCACATACAAATTGACATCATTATCATCACTGTCTTCGCTATCCATGTTGACTCGATCAATTGTAACATTGACATCACGTAAATCCTTCACCTCTATAACACAAACATTGTAGAAGAATAGCTAAATC-TAATCCAATCTGTAATAAACCACACATAAGAAATTGTAATGGAGCATTTTCTAATATGAAATAAATTGTTTTGAATACATCACCTGAAGTCCACATTAACACCATTGAAATACTCATTCCAACAATCGACTTATTATAAAAATTCTTTGTAAATTGTGGTAAACCCAACATCGATTCGATAAACAAGGCAGTAAAGCCCAATAATTGAACATAGATTTGACTCGATGACAATAAGTAAGTGCACAGACCAG] [+] EMBL CD072968 [AATTTATTAACTGTTTATAAACTCTTCCATTCATTATCGCATATGGTAGATCGAACAATCTGAAAAAAATAACATAATCAGAGGGTTATAGTAATCGCTTCAAGTTGACTTTAAGCCGAAATACATAGGAATTGAAGAGAAAATACAAAAGTGAACAACGACAAAAATTAAACAAATATACAAGGTCACCTAAATGAGATCTGAAAATAAAGAGAATATTGGTACGTGAAACTGATGGGCATAGGAAAGATCTCCCTACAACGGAAGTACAAAATAATAAATATTCCAGATAAGCTAAACAAGAAAAGTAATTTTACTATTCACAATCACATACAAATTGACATCATTATCATCACTGTCTTCGCTATCCATGTTGACTCGATCAATTGTAACATTGACATCACGTAAATCCTTCACCTCTATAACACAAACATTGTAGAAGAATAGCTAAATC TAATCCAATCTGTAATAAACCACACATAAGAAATTGTAATGGAGCATTTTCTAATATGAAATAAATT ] [+] EMBL CD136162 [ CAAAAATAACATAATCAGAGGGTTATAGTAATCGCTTCAAGTTGACTTTAAGCCGAAATACATAGGAATTGAAGAGAAAATACAAAAGTGAACAACGACAAAAATTAAACAAATATGCAAGGTCACCTAAATGAGATCTGAAAATAAAGAGAATATTGGTACGTGAAACTGATGGGCATAGGAAAGATCTCCCTACAACGGAAGTACAAAATAATAAATATTCCAGATAAGCTAAACAAGAAAAGTAATTTTACTATTCACAATCACATACAAATTGACATCATTATCATCACTGTCTTCGCTAT ] [+] EMBL CD136075 [ CAAAAATAACATAATCAGAGGGTTATAGTAATCGCTTCAAGTTGACTTTAAGCCGAAATACATAGGAATTGAAGAGAAAATACAAAAGTGAACAACGACAAAAATTAAACAAATATACAAGGTCACCTAAATGAGATCTGAAAATAAAGAGAATATTGGTACGTGAAACTGATGGGCATAGGAAAGATCTCCCTACAACGGAAGTACAAAATAATAAATATTCCAGATAAGCTAAACAAGAAAAGTAATTTTACTATTCACAATCACATACAAATTGACATCATTATCATCACTGTCTTCGCTAT ] [-] EMBL SM7281 [ ACCTAAANGAGATCTGAAAATAAAGAGAANATTGGTACGTGAAACTGATGGGCATAGGAAAGATCTCCCTACAACGGAAGTACAAAATAATAAATATTCCAGATAAGCTAAACAAGAAAAGTAATTTTACTATTCACAATCACATACAAATTGACATCATTATCATCACTGTCTTCGCTATCCATGTTGACTCGATCAATTGTAACATTGACATCACGTAAATCCTTCACCTCTATAACACAAACATTGTAGAAGAATAGCTAAATC TAATCCAATCTGTAATAAACCACACATAAGAAATTGTAATGGAGCATTTTCTAATATGAAATAAATTGTTTTGA ] [-] EMBL SM020 [ taTCAC ATC CATAC AATTGACATCATTATCATCACTGTCTTCGCTATCCATGTTGACTCGATCAATTGTAACATTGACATCACGTAAATCCTTCACCTCTATAACACAAACATTGTAGAAGAATAGCTAAATCTTAATCCAATCTGTAATAAACCACACATAAGAAATTGTAATGGAGCATTTTCT ] [-] EMBL CD191955 [ TTCACCTCTATAACACAAACATTGTAGAAGAATAGCTAAATC TAATCCAATCTGTAATAAACCACACATAAGAAATTGTAATGGAGCATTTTCTAATATGAAATAAATTGTTTTGAATACATCACCTGAAGTCCACATTAACACCATTGAAATACTCATTCCAACAATCGACTTATTATAAAAATTCTTTGTAAATTGTGGTAAACCCAACATCGATTCGATAAACAAGGCAGTAAAGCCCAATAATTGAACATAGATTTGACTCGATGACAATAAGTAAGTGCACAGACCAG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||