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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8117 cluster # 8117       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8117#0 length = 1067 sequences # 6  

consensusID : consensus_8117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1067
fasta sequence
                              [TCATCCACGAATTCGTTCATGGAAGAAAAGTTTGGAAAAATGTATTCGATCTCGTGCTGATCGTCATAGGATTGACTATAGAGATTGTTACACTATCCTAACTTTATTTGGACTCCCCAGTCACGTTATTGATATGAAAAGAGAACATGCTTTAGAAACTGCCAAAGCTAAATTGTTAGAAGATTCTACAAAAGAAGAGTCTGCAACGGATGCTCGTAAAGATGATGAAGAAGAAGATGAGGAGGAAAATGACGATGAAGAAGAGGAAGAGGAAGAAGAACGAAAGTCATTCAAAGAAGGTAAACATCCTACAGACTCTACATCAAATACAGAGTGTGTTGGGGATACACATGCGGAATCGTCGTAGGGTATCTTCTCGTTAAATGTTATACATTAGTTGTAAAATACATTAAAATGGTTATTTGGAGAACAAATTTCGTTCTCGCTTTTGTCAGTGCTATGTAAGACAATGACCGGTCTTATCTTTGCTCGTTTCGTCTATTAAATGTTATCATTTCACTTACTCTTTCGTCAAACTTTATCATCTTGTCTCATTTTTTTCGATGCATAAATAATATCCTTTTTAATGCATCATCAAATCCACATTTCTAAATTACTCCCGTTTTCGTTTTTATGCATTTGTTATACGTTTAAGAGTAGGTTGTCTTTTTTTTTCTTACTTAATTGGGATTGTTTGAATTTATCCGATCGCATTTGATATGTACCAATTTTCCAATGCTTTCAAAAACTTCGTAGTGTGACCATGCCCACAAGTTCCTGCAGCATCCATTTTCTGTTGTTATTATTAATATCACTATGCACGCTACTCTTGCTATTTCAGTTTTACTAGGGTTAGTCAAGTTATATCTTCGGATCTCCTATGCTTCTTGGTGGTCATCATACCTATAAGTAGGTCATATCTTCAAGATTTAAGAAATTCCTACACTGCGAATCAGAACAAGATTGTCCTTAAGTAGTACACTTGTCATTGCACTATCAATTTGTACTTTCTACTCATTCTTATTTAGTCCATTCCACTGACGCCTAAACTACTGTGATTGGTTTAT]

[+] EMBL CD145913             [TCATCCACGAATTCGTTCATGGAAGAAAAGTTTGGAAAAATGTATTCGATCTCGTGCTGATCGTCATAGGATTGACTATAGAGATTGTTACACTATCCTAACTTTATTTGCACTCCCCAGTCACGTTATTGATATGAAAAGAGAACATGCTTTAGAAACTGCCAAAGCTAAATTGTTAGAAGATTCTACAAAAGAAGAGTCTGCCACGGATGCTCGTAAAGATGATGAAGAAGAAGATGAGGAGGAAAATGACGATGAAGAAGAGGAAGAGGAAGAAGAACGAAAGTCATTCAAAGAAGGTAAACATCCTACAGACTCTACATCAAATACAGAGTGTGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD138262             [                                                                                      GTTACACTATCCTACTTTTGTTTGGACTCCCTAGNCACGTTATTGATATGAAAAGAGAACATGCTTTAGAAACTGCCAAAGCTAAATTGTTAGAAGATTCTACAAAAGAAGAGTCTGCAACGGATGCTCGTAAAGATGATGAAGAAGAAGATGAGGAGGAAAATGACGATGAAGAAGAGGAAGAAGAAGAAGAACGAAAGTCATTCAAAGAAGGTAAACATCCTACAGACTCTACATCAAATACAGAGTGTGTTGGGGATACACATGCGGAATCGTCGTAGGGTATCTTCTCGTTAAATGTTATACATTAGTTGTAAAATACATTAAAATGGTTATTTGGAGAACAAATTTCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD163735             [                                                                                                      TTTATTTGGACTCCCCAGTCACGTTATTGATATGAAAAGAGAACATGCTTTAGAAACTGCCAAAGCTAAATTGTTAGAAGATTCTACAAAAGAAGAGTCTGCAACGGATGCTCGTAAAGATGATGAAGAAGAAGATGAGGAGGAAAATGACGATGAAGAAGAGGAAGAGGAAGAAGAACGAAAGTCATTCAAAGAAGGTAAACATCCTACAGACTCTACATCAAATACAGAGTGTGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AI975724             [                                                                                                                                             AGAACATGCTTTAGAAACTGCCAAAGCTAAATTGTTAGAAGATTCTACAAAAAAAGAGTCTGCAACGGATGCTCGTAAAGATGATGAAGAAGAAGATGAGGAGGAAAATGNCGATGAAGAAGAGGAAGAGGAAGAAGATCGAAAGTCATTCAAAGAAGGTAAACATCCTACAGACTCTACATCAAATACAGAGTGTGTTGGGGATACACATGCGGAATCGTCGTAGGGTATCTTCTCGTTAAGTGTTATACATTAGTTGTAAAATACATTAAAATGGTTATTTGGAGAACAAATTTCGTTCTCGCTTTTGTCAGTGCTATGTAAGACAATGACCGGTCTTATCTTTGCTCGTTTCGTCTATTAAATGTTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI975335             [                                                                                                                                                                                                                                                                                                                                                                  GGAATCGTCGTAGGGTATCTTCTCGTTAAATGTTATACATTAGTTGTAAAATACATTAAAATGGTTATTTGGAGAACAAATTTCGTTCTCGCTTTTGTCAGTGCTATGTAAGACAATGACCGGTCTTATCTTTGCTCGTTTCGTCTATTAAATGTTATCATTTCACTTACTCTTTCGTCAAACTTTATCATCTTGTCTCATTTTTTTCGATGCATAAATAATATCCTTTTTAATGCATCATCAAATCCACATTTCTAAATTACTCCCGTTTTCGTTTTTATGCATTTGTTATACGTTTAAGAGTAGGTTGTCTTTTTTTTTCTTACTTAATTGGGATTGTTTGAATTTATCCGATCGCATTTGATATGTACCAATTTTCCAATGCTTTCAAAAACTTCGTAGTGTGACCATGCCCACAAGTTCCTGCAGCATCCATTTTCTGTTGTTATTATTAATATCACTATGCACGCTACTCTTGCTATTTCAGTTTTACTAGGGTTAGTCAAGTTATATCTTCGGATCTCCTATGCTTCTTGGTGGTCATCATACCTATAAGTAGGTCATATCTTCAAGATTTAAGAAA                                                                                                                                  ]
[-] EMBL CD136581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCAAAAACTTCGTAGTGTGACCATGCCCACAAGTTCCTGCAGCATCCATTTTCTGTTGTTATTATTAATATCACTATGCACGCTACTCTTGCTATTTCAGTTTTACTAGGGTTAGTCAAGTTATATCTTCGGATCTCCTATGCTTCTTGGTGGTCATCATACCTATAAGTAGGTCATATCTTCAAGATTTAAGAAATTCCTACACTGCGAATCAGAACAAGATTGTCCTTAAGTAGTACACTTGTCATTGCACTATCAATTTGTACTTTCTACTCATTCTTATTTAGTCCATTCCACTGACGCCTAAACTACTGTGATTGGTTTAT]


>consensus_8117#0 TCATCCACGAATTCGTTCATGGAAGAAAAGTTTGGAAAAATGTATTCGATCTCGTGCTGA TCGTCATAGGATTGACTATAGAGATTGTTACACTATCCTAACTTTATTTGGACTCCCCAG TCACGTTATTGATATGAAAAGAGAACATGCTTTAGAAACTGCCAAAGCTAAATTGTTAGA AGATTCTACAAAAGAAGAGTCTGCAACGGATGCTCGTAAAGATGATGAAGAAGAAGATGA GGAGGAAAATGACGATGAAGAAGAGGAAGAGGAAGAAGAACGAAAGTCATTCAAAGAAGG TAAACATCCTACAGACTCTACATCAAATACAGAGTGTGTTGGGGATACACATGCGGAATC GTCGTAGGGTATCTTCTCGTTAAATGTTATACATTAGTTGTAAAATACATTAAAATGGTT ATTTGGAGAACAAATTTCGTTCTCGCTTTTGTCAGTGCTATGTAAGACAATGACCGGTCT TATCTTTGCTCGTTTCGTCTATTAAATGTTATCATTTCACTTACTCTTTCGTCAAACTTT ATCATCTTGTCTCATTTTTTTCGATGCATAAATAATATCCTTTTTAATGCATCATCAAAT CCACATTTCTAAATTACTCCCGTTTTCGTTTTTATGCATTTGTTATACGTTTAAGAGTAG GTTGTCTTTTTTTTTCTTACTTAATTGGGATTGTTTGAATTTATCCGATCGCATTTGATA TGTACCAATTTTCCAATGCTTTCAAAAACTTCGTAGTGTGACCATGCCCACAAGTTCCTG CAGCATCCATTTTCTGTTGTTATTATTAATATCACTATGCACGCTACTCTTGCTATTTCA GTTTTACTAGGGTTAGTCAAGTTATATCTTCGGATCTCCTATGCTTCTTGGTGGTCATCA TACCTATAAGTAGGTCATATCTTCAAGATTTAAGAAATTCCTACACTGCGAATCAGAACA AGATTGTCCTTAAGTAGTACACTTGTCATTGCACTATCAATTTGTACTTTCTACTCATTC TTATTTAGTCCATTCCACTGACGCCTAAACTACTGTGATTGGTTTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)