These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8198#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 596 fasta sequence [AAGTAAAATAACGA-GGATTAGAGCCGACGAGCGGAAATACGCAGATGACTTGC-TT-CCAGCTAAAGAGAAAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACTTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCTGAGAAACAGGCCTTTACATAAGTATTGGTAAG-CAAGGATAATATGATGCACAGCTCAAGATACAGATTGACAAAGCANAGCCAAAATTCTTGCAAGTGAAAAATATCTGACTCAAGAGAACTACCACACAAGACTAGTTAGAAC-TTTCAACACTAACATCA-AAACAATTTTATTGTTAGGA] [+] EMBL CD145208 [AAGTAAAATAACGA GGATTAGAGCCGACGAGCGGAAATACGCAGATGACTTGC TT CCAGCTAAAGAGAAAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACTTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCTGAGAAACAGGCCTTTACATAAGTATTGGTGAGNCAGGGAT ATATGATGCACAGCTCAAGATACAGATTGACAAAGCANAGCCAAAATTCTTGCAAGTGAAAAATATCTGACTCAAGAGAGCTACCACACAAGACTAGTTAGAACTTTTTCACACT ACATCANAAAC ATTNTATTG ] [+] EMBL CD145210 [AAGTAAAATAACGA GGATTAGAGCCGACGAGCGGAAATACGCAGATGACTTGC TT CCAGCTAAAGAGAAAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACTTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCTGAGAAACAGGCCTTTACATAAGTATTGGTAAG CAAGGATAATATGATGCACAGCTCAAGATACAGATTGACAAAGCAAAGCCAAAATTCTTGCAAGTGAAAAATATCTGACTCAAGAGAACTACCACACAAGACTAGTTAGAAC TTTCAACACTAACATCA AAACAATTTTATTG ] [+] EMBL CD145266 [AAGTAAAATAACGA GGATTAGAGCCGACGAGCGGAAATACGCAGATGACTTGC TT CCAGCTAAAGAGAAAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACTTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCTGAGAAACAGGCCTTTACATAAGTATTGGTAAG CAAGGATAATATGATGCACAGCTCAAGATACAGATTGACAAAGCANAGCCAAAATTCTTGGCAGTGANAAATATCTG ] [-] EMBL CD145336 [ AGTAAAAT ACGAGGGATTAGAGCCGACGAGCGGAAATACGCAGATGAC TGC TTNCCAGCTAAAGAGAAAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACCTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCTGAGAAACAGGCCTTTACATAAGTATTGGTAAG CAAGGATAATATGATGCACAGCTCAAGATACAGATTGACAAAGCAAAGCCAAAATTCTTGCAAGTGAAAAATATCTGACTCAAGAGAACTACCACACAAGACTAGTTAGAAC TTTCAACACTAACATCA AAGCAATTTTATTGT ] [-] EMBL CD145261 [ AGTAAAATACNGA GGATTAGAGCCGACGAGCGGAAATACGCAGATGAC TGCTTT CCAGCTAAAGAGANAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACTTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCTGAGAAACAGGCCTTTACATAAGTATTGGTAAG CAAGGATAATATGATGCACAGCTCAAGATACAGATTGACAAAGCAAAGCCAAAATTCTTGCAAGTGAAAAATATCTGACTCAAGAGAACTACCACACAAGACTAGTTAGAAC TTTCAACACTAACATCA AAACAATTTTATTGT ] [+] EMBL CD088580 [ ACGAGCGGAAATACGCAGATGACTTGC TT CCAGCTAAAGAGAAAATTAGGAAAAGACGTTGGAAATGGATACGACATACATTACAGAAATCATCAGACTGCATCACGAGGCAAACGCTAACTTGGGATTTTGAAGGAAAAGGAAAAGAGGAAGACCAAGGAACATATTGTGTCGGGAATTCGAAGCAGACATTAAAAGAATCAATAGCAACTGGAAAGAAACGTAAAGGATTGTCCAGGACAGAGTTCGATGGAGAATGTTGGTGGATACCCTATGTCCCTCCACGAGGGTTAACAGGAGTAGATAAGTAAGTGCAGACGACTTAGCCCTTTTGTCATATATACAGGAACAAATGCAGATGAAGACAGTCAATTTAGTGGCGGCTTTCCGAGAAACAGGCCTTTACATAAGTATTGGTAAG CAAGGATAATATGATGCACAGCTCAAGATACAGATTGACAAAGCANAGCCAAAATTCTTGCAAGTGAAAAATATCTGACTCAAGAGAACTACCACACAAGACTAGTTAGAAC TTTC ACACTAACATC ANACAATTTTATTGGTAGGA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||