Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8265 cluster # 8265       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8265#0 length = 594 sequences # 6  

consensusID : consensus_8265#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 594
fasta sequence
                              [CCAAATGGATCCCAGGAAAGACGAAACTGTTGGAAACAAATTAAAGAAGCTATTCAGTACCAGAGACCATCCTAAAGAAAAGCATAAAGATAAATATAGTAAAGATTCTAGAAGTAGCGAGTCACCACCGTCATCGGCAAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATTTTTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAG-AAAAACCTATAAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAAAAACGCTCCTGATTATTGTGCGAGGCTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCAGCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGTTCGGGAATTTAACAATCCATCTAACAACGGCCTGAACAATTTGCTACACTTTCTTGCTCTTACTCTAACAAACTACTACCCTAGTTGTGCTCTACACTGTTTGCGTTGTATCCGTGCTCTTGGGAATTGCGGTTATGGCTTATATGCTTTGGTAGACCATGANAGTGCAACTAC]

[+] EMBL CD118414             [CCAAATGGATCCCAGGAAAGACGAAACTGTTGGAAACAAATTAAAGAAGCTATTCAGTACCAGAGACCATCCTAAAGAAAAGCATAAAGATAAATATAGTAAAGATTCTAGAAGTAGCGAGTCACCACCGTCATCGGCAAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATTTTTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAG AAAAACCTATAAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAAAAACGCTCCTGATTATTGTGCGAGGCTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCAGCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGTTCGGGAATTTAACAATCCATCTAACAACGGCCTGAACAATTTGCTACACTTTCTTGCTCTTACTCTAACAAACTACTACCCTAGTTGTGCTCTACACTGTTTGCGTTGTATCCGTGCTCTTGGGAATTGCGGTTATGGCTTATATGCTTTGGTAGACCATGANAGTGCAACTAC]
[+] EMBL CD066539             [                  AGACGAAACTGTTGGAAACAAATTAAAGAAGCTATTCAGTACCAGAGACCATCCTAAAGAAAAGCATAAAGATAAATATAGTAAAGATTCTAGAAGTAGCGAGTCACCACCGTCATCGGCAAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATTTTTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAGAAAAAACCTAT AAAACCAAACTCGAGATGCTTGGAACGTATGGGAAGAAGCTTGGATCTTCAAAAAATGCTC                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD067064             [                          CTGTTGGAAACAAATTAAAGAAGCTATTCACTACCAGAGACCATGCTACAGAAAAGCATAGAGATAAATATAGTCAAGATTCTATAAGTAGCGAGTCACCACCGTCATCGGCAAATATGGGTAGCGTGAGTGATGACGAAATAAAACGGAAATTTCTGCAGATGTCGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAG AAAAACCTATGAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAAAAACGCTCCTGATTATTGTGCGAGGTTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCAGCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGTTCGGGAATTTAACAATCCATCTAACAACGGCCTGAACAATTTGCTACACTTTCTGGCTCTTACTCTAACAAACTACTACCCTAGTTGTGCTCTACACTGTT                                                                         ]
[+] EMBL CD067047             [                          CTGTTGGAAACAAATTAAAGAAGCTATTCAGTACCAGAGACCATCCTAAAGAAAAGCATAAAGATAAATATAGTAAAGATTCTAGAAGTAGCGAGTCACCACCGTCATCGGCAAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATTTCTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAG AAAAACCTATAAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAAAAACGCTCCTGATTATTGTGCGAGGTTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCAGCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGTTCGGGAATTTAACAATCCATCTAACAACGGCCTGAACAATTTGCTACACTTTCTGGCTCTTACTCTAACAAACTACTACCCTAGTTGTGC                                                                                    ]
[+] EMBL CD114816             [                                                                                                                                   CATCGGCGAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATTTTTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAG AAAAACCTATAAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAAAAACGCTCCTGATTATTGTGCGAGGCTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCAGCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGTTCGGGAATTTAACAATCCATCTAACAACGGCCTGAACAATTTGCTACACTTTCTTGCTCTTACTCTAACAAACTACTACCCTAGTTGTGCTCTACACTGTTTG                                                                       ]
[-] EMBL CD114664             [                                                                                                                                    ATCGGCAAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATTTTTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAG AAAAACCTATAAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAAAAACGCTCCTGATTATTGTGCGAGGCTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCAGCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGTTCGGGAATTTAACAATCCATCTAACAACGACCTGAACAATTTGCTACACTTTCTTGCTCTTACTCTAACAAACTACTACCCTAGTTGTGCTCTACACTGTTTGC                                                                      ]


>consensus_8265#0 CCAAATGGATCCCAGGAAAGACGAAACTGTTGGAAACAAATTAAAGAAGCTATTCAGTAC CAGAGACCATCCTAAAGAAAAGCATAAAGATAAATATAGTAAAGATTCTAGAAGTAGCGA GTCACCACCGTCATCGGCAAATATGGGTAGTGTGAGTGATGACGAAGTAGAACGGAAATT TTTGCAAATGTTGGAAGATATGAATTTATCGACAGAACAAACTATATCTTTGAGAGAAAA ACCTATAAAAACCAAACTCGAGATGCTTGAAACGTATGGGAAGAAGCTTGGATCTTCAAA AAACGCTCCTGATTATTGTGCGAGGCTCTTGTTGGTTCCACAAAACTATTCTCCAAAGCA GCTGCTAAACTCATTGGAAAACCTACGTGTAAACTTGTTAAATAATGGTGTAAGTTGGGT TCGGGAATTTAACAATCCATCTAACAACGGCCTGAACAATTTGCTACACTTTCTTGCTCT TACTCTAACAAACTACTACCCTAGTTGTGCTCTACACTGTTTGCGTTGTATCCGTGCTCT TGGGAATTGCGGTTATGGCTTATATGCTTTGGTAGACCATGANAGTGCAACTAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)