Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 8319 cluster # 8319       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8319#0 length = 918 sequences # 6  

consensusID : consensus_8319#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 918
fasta sequence
                              [ATACGAAATATAAATCATGTCAAAATACAGAAATAATTAAATAAAGTAAACAAACACCATAGAAAATAACCTGGTAACTAGAATAACAGAAAAATAAAAGTAAGATTTACTTGTCATTCATGCATACAACTGTCTTCTACACTGAATCCCTACATCCAGTATATGTTTCAAATAGGCTTGTATATCGGATTCTTCGTCAAAAACATTTCCAGAACGCACTTTTTCCGAAATATAATTAGCCACTTTACTCAAATCATCTAGAACATTTGAAGCCTGTAATATTTTCAAAGCAGTTACGTGTGAATTCGATTTCGTATTACTGTTACTTTCCAATTCAGTTTTAGATTTTAATGCTTCAAACAACCAATCAATCAACTCAGGTACACACTTTCCAGGTGCTGTCACTGGCCAACCATTAATAATTTGGGCAAATAAACAGGTAGCTGCTAAAGTTGCAGTTGTCGCAACTTTTAGTAAATCATTATTAATTTTAGCATTACATACTGATTCCTTTAGTTGCATTTCAACTTGAATGGCTAATTCATTAGCTTTAAGTCGTTCTTCTCGTTCTCGTTTATTATTATGACCATTAGGTGGATGAAATACGGAAATAGTCAAGCCGAGAATGTCAACTGATAGATTTTTTATTGGAGTATAAAATGTATCAAGTGATGTTAGATTATTTTGTCCAACTTTAAAGCTGTCCAAAACTTGCTGTATAGCACTGCTTATTGAAACTGCATCTGGTAAATTAGTATGTTTTAACAATTCTATCAAACGATGATACGATTCAATGCTTAATGATTCTGTAATATTTGATTTGACATTGTTATTTTGTGTTGAATCTGAAGAGTTTGTTTTTAATGGACCATTTTTACTAGTTGTAGATTCAGGCCATGGAATTCCGAATTCATACGA]

[+] EMBL AI067866             [ATACGAAATATAAATCATGTCAAAATACAGAAATAATTAAATAAAGTAAACAAACACCATAGAAAATAACCTGGTAACTAGAATAACAGAAAAATAAAAGTAAGATTTACTTGTCATTCATGCATACAACTGTCTTCTACACTGAATCCCTACATCCAGTATATGTTTCAAATAGGCTTGTATATCGGATTCTTCGTCAAAAACATTTCCAGAACGCACTTTTTCCGAAATATAATTAGCCACTTTACTCAAATCATCTAGAACATTTGAAGCCTGTAATATTTTCAAAGCAGTTACGTGTGAATTCGATTTCGTATTACTGTTACTTTCCAATTCAGTTTTAGATTTTAATGCTTCAAACAACCAATCAATCAACTCAGGTACACACTTTCCAGGTGCTGTCACTGGCCAACCATTAATAATTTGGGCAAATAAACAGGTAGCTGCTAAAGTTGCAGTTGTCCCAACTTTTAGTAAATCATTATTAATTTTAGCATTACATACTGATTCCTTTAGTTGCATTTCAACTTGAATGGCTAATTCATTAGCTTT                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AI067261             [ATACGAAATATAAATCATGTCAAAATACAGAAATAATTAAATAAAGTAAACAAACACCATAGAAAATAACCTGGTAACTAGAATAACAGAAAAATAAAAGTAAGATTTACTTGTCATTCATGCATACAACTGTCTTCTACACTGAATCCCTACATCCAGTATATGTTTCAAATAGGCTTGTATATCGGATTCGTCGTCAAAAACATTTCCAGAACGCACTTTTTCCGAAATATAATTAGCCACTTTACTCAAATCATCTAGAACATTTGAAGCCTGTAATATTTTCAAAGCAGTTACGTGTGAATTCGATTTCGTATTACTGTTACTTTCCAATTCAGTTTTAGATTTTAATGCTTCAAACAACCAATCAATCAACTCAGGTACACACTTTCCAGGTGCTGTCACTGGCCAACCATTAATAATTTGGGCAAATAAACAGGTAGCTGCTAAAGTTGCAGTTGTCGCAACTTTTAGTAAATCATTATTAATTTTAGCATTACATACTGATTCCTTTAGTTGCATTTCAACTTGAATGGC                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AI067804             [ATACGAAATATAAATCATGTCAAAATACAGAAATAATTAAATAAAGTAAACAAACACCATAGAAAATAACCTGGTAACTAGAATAACAGAAAAATAAAAGTAAGATTTACTTGTCATTCATGCATACAACTGTCTTCTACACTGAATCCCTACATCCAGTATATGTTTCAAATAGGCTTGTATATCGGATTCTTCGTCAAAAACATTTCCAGAACGCACTTTTTCCGAAATATAATTAGCCACTTTACTCAAATCATCTAGAACATTTGAAGCCTGTAATATTTTCAAAGCAGTTACGTGTGAATTCGATTTCGTATTACTGTTACTTTCCAATTCAGTTTTAGATTTTAATGCTTCAAACAACCAATCAATCAACTCAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI068161             [ATACGAAATATAAATCATGTCAAAATACAGAAATAATTAAATAAAGTAAACAAACACCATAGAAAATAACCTGGTAACTAGAATAACAGAAAAATAAAAGTAAGATTTACTTGTCATTCATGCATACAACTGTCTTCTACACTGAATCCCTACATCCAGTATATGTTTCAAATAGGCTTGTATATCGGATTCTTCGTCAAAAACATTTCCAGAACGCACTTTTTCCGAAATATAATTAGCCACTTTACTCAAATCATCTAGAACATTTGAAGCCTGTAATATTTTCAAAGCAGTTACGTGTGAATTCGATTTCGTATTACTGTTACTTTCCAATTCAGTTTTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD121676             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCAGTTGTCGCAACTTTTAGTAAATCATTATTAATTTTAGCATTACATACTGATTCCTTTAGTTGCATTTCAACTTGAATGGCTAATTCATTAGCTTTAAGTCGTTCTTCTCGTTCTCGTTTATTATTATGACCATTAGGTGGATGAAATACGGAAATAGTCAAGCCGAGAATGTCAACTGATAGATTTTTTATTGGAGTATAAAATGTATCAAGTGATGTTAGATTATTTTGTCCAACTTTAAAGCTGTCCAAAACTTGCTGTATAGCACTGCTTATTGAAACTGCATCTGGTAAATTAGTATGTTTTAACAATTCTATCAAACGATGATACGATTCAATGCTTAATGATTCTGTAATATTTGATTTGACATTGTTATTTTGTGTTGAATCTGAAGAGTTTGTTTTTAATGGACCATTTTTACTAGTTGTAGATTCAGGCCATGGAATTCCGAATTCATACGA]
[-] EMBL CD121684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTTGTCGCAACTTTTAGTAAATCATTATTAATTTTAGCATTACATACTGATTCCTTTAGTTGCATTTCAACTTGAATGGCTAATTCATTAGCTTTAAGTCGTTCGTCTCGTTCTCGTTTATTATTATGACCATTAGGTGGATGAAATACGGAAATAGTCAAGCCGAGAATGTCAACTGATAGATTTTTTATTGGAGTATAAAATGTATCAAGTGATGTTAGATTATTTTGTCCAACTTTAAAGCTGTCCAAAACTTGCTGTATAGCACTGCTTATTGAAACTGCATCTGGTAAATTAGTATGTTTTAACAATTCTATCAAACGATGATACGATTCAATGCTTAATGATTCTGTAATATTTGATTTGACATTGTTATTTTGTGTTGAATCTGAAGAGTTTGTTTTTAATGGACCATTTTTACTAGTTGTAGATTCAGGCCATGGAATTCCGAATTCATACGA]


>consensus_8319#0 ATACGAAATATAAATCATGTCAAAATACAGAAATAATTAAATAAAGTAAACAAACACCAT AGAAAATAACCTGGTAACTAGAATAACAGAAAAATAAAAGTAAGATTTACTTGTCATTCA TGCATACAACTGTCTTCTACACTGAATCCCTACATCCAGTATATGTTTCAAATAGGCTTG TATATCGGATTCTTCGTCAAAAACATTTCCAGAACGCACTTTTTCCGAAATATAATTAGC CACTTTACTCAAATCATCTAGAACATTTGAAGCCTGTAATATTTTCAAAGCAGTTACGTG TGAATTCGATTTCGTATTACTGTTACTTTCCAATTCAGTTTTAGATTTTAATGCTTCAAA CAACCAATCAATCAACTCAGGTACACACTTTCCAGGTGCTGTCACTGGCCAACCATTAAT AATTTGGGCAAATAAACAGGTAGCTGCTAAAGTTGCAGTTGTCGCAACTTTTAGTAAATC ATTATTAATTTTAGCATTACATACTGATTCCTTTAGTTGCATTTCAACTTGAATGGCTAA TTCATTAGCTTTAAGTCGTTCTTCTCGTTCTCGTTTATTATTATGACCATTAGGTGGATG AAATACGGAAATAGTCAAGCCGAGAATGTCAACTGATAGATTTTTTATTGGAGTATAAAA TGTATCAAGTGATGTTAGATTATTTTGTCCAACTTTAAAGCTGTCCAAAACTTGCTGTAT AGCACTGCTTATTGAAACTGCATCTGGTAAATTAGTATGTTTTAACAATTCTATCAAACG ATGATACGATTCAATGCTTAATGATTCTGTAATATTTGATTTGACATTGTTATTTTGTGT TGAATCTGAAGAGTTTGTTTTTAATGGACCATTTTTACTAGTTGTAGATTCAGGCCATGG AATTCCGAATTCATACGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)