cluster # 8677

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Schistosoma mansoni
cluster # 8677 cluster # 8677 Sequences # 7 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8677#0 length = 961 sequences # 3
consensus_8677#1 length = 565 sequences # 1

consensus_8677#2 length = 565 sequences # 1
consensus_8677#3 length = 484 sequences # 1
consensus_8677#4 length = 201 sequences # 1

consensusID : consensus_8677#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 961
fasta sequence

                              [CCTTTTGTTGTTGACCTATGTTGGGACGTTTTCTGGCCTTCTTTGTTAGCTCTTACCCCTTTATTGATTATTAAGATATAATTTTTTTAAAAACCGTTTATACTTTTTTCGTTTCCTATTTTTATTTAATATAAAGCCTTTCTTGTTATTATCATTTTTTTCTGACTTCACTGGTCTCTAGTGCTTAGTATACAATTTTTCATGAAATACATACTTTGTTTCTTTTA-AAAAGAAGACAAGTAAATATTTTCTATCCAATAAAAAGCTATTATCGTATTTATTCTTGCCTGGTCAACCTTTCATGCTCATTTCTTATACTTGGACTCTTTCTCATTTTTTTTTTACTAGAATAACTGATATCAATGTGGTACATGTTGACACTAAAATACAAATTGTTGGTTTTGTATATCTTATGTCTAGTCCTAGTGATTTTTGTTTGTTTATTCATTTTTCTTCAATCTGTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTGGTTGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATGAAGCGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAAACANTAGAAAGTAAATAAATGAGAATACTTATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAANTTACTTTTCTTCCTTCATAACTTGNGAAGGTATTCTCTTTTTTGTATTTGTATGCATTGCGCAATTAGAAACTTTA-ACATATGAATATTGGNTGCTAGNNTATACTTTCTAT-ATATATAG]

[+] EMBL CD081186             [CCTTTTGTTGTTGACCTATGTTGGGACGTTTTCTGGCCTTCTTTGTTAGCTCTTACCCCTTTATTGATTATTAAGATATAATTTTTTTAAAAACCGTTTATACTTTTTTCGTTTCCTATTTTTATTTAATATAAAGCCTTTCTTGTTATTATCATTTTTTTCTGACTTCACTGGTCTCTAGTGCTTAGTATACAATTTTTCATGAAATACATACTTTGTTTCTTTTA AAAAGAAGACAAGTAAATATTTTCTATCCAATAAAAAGCTATTATCGTATTTATTCTTGCCTGGTCAACCTTTCATGCTCATTTCTTATACTTGGACTCTTTCTCATTTTTTTTTTACTAGAATAACTGATATCAATGTGGTACATGTTGACACTAAAATACAAATTGTTGGTTTTGTATATCTTATGTCTAGTCCTAGTGATTTTTGTTTGTTTATTCATTTTTCTTCAATCTGTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTGGTTGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATGAAGCGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAAACANTAGAAAGTAAATAAATGAGAATACTTATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAANTTACTTTTCTTCCTTCATAACTTGNGAAGGTATTCTCTTTTTTGTATTTGTATGCATTGCGCAATTAGAAACTTTA ACATATGAATATTGGNTGCTAGNNTATACTTTCTAT ATATATAG]
[-] EMBL CD075012             [                                                                                                                                                                                 CTAGTGCTTAGTATACAATTTTTCATGAAATACATACTTTGTTTCTTTTATAAAAGAAGACAAGTAAATATTTTCTATCCAATAAAAAGCTATTATCGTATTTATTCTTGCCTGGTCAACCTTTCATGCTCATTTCTTATACTTGGACTCTTTCTCATTTTTTTTTTACTAGAATAACTGATATCAATGTGGTACATGTTGACACTAAAATACAAATTGTTGGTTTTGTATATCTTATGTCTAGTCCTAGTGATTTTTGTTTGTTTATTCATTTTTCTTCAATCTGTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTGGTTGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATGAAGCGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAAACAATAGAAAGTAAATAAATGAGAATACTTATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAATTAACTTTTCTTCCTTCATAACTTGTGAAGGTATTCTCTTTTTTGTATTTGTATGCATTGCGCAATTAGAAACTTTATACATATGATTATTGTTTGCTAGTTTATACTTTCTATAATATATA ]
[-] EMBL CD146466             [                                                                                                                                                                                                                                                                                                                         TTATACTTGGACTCTTTCTCATTTTTTTTTTACTAGAACAACTGATATCAATGTGGTACATGTTGACACTAAAATACAAATTGTTGGTTTTGTATATCTTATGTCTAGTCCTAGTGATTTTTGTTTGTTTATTCATTTTTCTTCAATCTGTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTGGTCGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGT                                                                                                                                                                                                                                                                                                                                    ]




>consensus_8677#0
CCTTTTGTTGTTGACCTATGTTGGGACGTTTTCTGGCCTTCTTTGTTAGCTCTTACCCCT
TTATTGATTATTAAGATATAATTTTTTTAAAAACCGTTTATACTTTTTTCGTTTCCTATT
TTTATTTAATATAAAGCCTTTCTTGTTATTATCATTTTTTTCTGACTTCACTGGTCTCTA
GTGCTTAGTATACAATTTTTCATGAAATACATACTTTGTTTCTTTTAAAAAGAAGACAAG
TAAATATTTTCTATCCAATAAAAAGCTATTATCGTATTTATTCTTGCCTGGTCAACCTTT
CATGCTCATTTCTTATACTTGGACTCTTTCTCATTTTTTTTTTACTAGAATAACTGATAT
CAATGTGGTACATGTTGACACTAAAATACAAATTGTTGGTTTTGTATATCTTATGTCTAG
TCCTAGTGATTTTTGTTTGTTTATTCATTTTTCTTCAATCTGTAATCATCTCTGGGTATT
TTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTG
GTTGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATC
AGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATG
AAGCGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAA
ACANTAGAAAGTAAATAAATGAGAATACTTATTTTTAGTTAAGATTTTTGTTTAATTCAG
TTTATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAA
NTTACTTTTCTTCCTTCATAACTTGNGAAGGTATTCTCTTTTTTGTATTTGTATGCATTG
CGCAATTAGAAACTTTAACATATGAATATTGGNTGCTAGNNTATACTTTCTATATATATA
G

consensusID : consensus_8677#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence

                              [TATTTTCACTCTCTTTTCAACTTTAATCATTTCCTTGCTATTTTTCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTTGTTTTTTTATGTGTGTGACTAAACACAATTTGATCATAATTCTACATTTTCGTTGGGTAGTGACTATATAAAGTAGAGGAAATATGGTGACATAATTGATGTAAATGAAAATATATGTATTACTGATAAAATGTAAAACCGAATTATACAAAGGAAAAGTAATGTGAAGATATGATTCTTTAGTTTGTAGGATTATCAGTAGTATTTTGGTTACTGAAAAATAACTTAAGTATGAATAATGATGACCCTTTACAGTCTCATATCAGTTGAAAAGTTTGAAAAAAATTTATATATCGTATTACCTTTTTAAAACACTTAAAATGGTTCACAGAATCACCAGTGGTAATTTACAGTTGTGTATGACTTTTCTTTCCGTTTTTTTTCCAGTCAACAAATACACATAGAATAAACGTATGTTTTAACTAGTCAATTGAATAATATGGAAAAGGAAATATAAATTG]

[+] EMBL CD131530             [TATTTTCACTCTCTTTTCAACTTTAATCATTTCCTTGCTATTTTTCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTTGTTTTTTTATGTGTGTGACTAAACACAATTTGATCATAATTCTACATTTTCGTTGGGTAGTGACTATATAAAGTAGAGGAAATATGGTGACATAATTGATGTAAATGAAAATATATGTATTACTGATAAAATGTAAAACCGAATTATACAAAGGAAAAGTAATGTGAAGATATGATTCTTTAGTTTGTAGGATTATCAGTAGTATTTTGGTTACTGAAAAATAACTTAAGTATGAATAATGATGACCCTTTACAGTCTCATATCAGTTGAAAAGTTTGAAAAAAATTTATATATCGTATTACCTTTTTAAAACACTTAAAATGGTTCACAGAATCACCAGTGGTAATTTACAGTTGTGTATGACTTTTCTTTCCGTTTTTTTTCCAGTCAACAAATACACATAGAATAAACGTATGTTTTAACTAGTCAATTGAATAATATGGAAAAGGAAATATAAATTG]




>consensus_8677#1
TATTTTCACTCTCTTTTCAACTTTAATCATTTCCTTGCTATTTTTCAGGTTTTACATTGA
CTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTTGTTTTTTTATGTGTGT
GACTAAACACAATTTGATCATAATTCTACATTTTCGTTGGGTAGTGACTATATAAAGTAG
AGGAAATATGGTGACATAATTGATGTAAATGAAAATATATGTATTACTGATAAAATGTAA
AACCGAATTATACAAAGGAAAAGTAATGTGAAGATATGATTCTTTAGTTTGTAGGATTAT
CAGTAGTATTTTGGTTACTGAAAAATAACTTAAGTATGAATAATGATGACCCTTTACAGT
CTCATATCAGTTGAAAAGTTTGAAAAAAATTTATATATCGTATTACCTTTTTAAAACACT
TAAAATGGTTCACAGAATCACCAGTGGTAATTTACAGTTGTGTATGACTTTTCTTTCCGT
TTTTTTTCCAGTCAACAAATACACATAGAATAAACGTATGTTTTAACTAGTCAATTGAAT
AATATGGAAAAGGAAATATAAATTG

consensusID : consensus_8677#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence

                              [TCAACTATAAAATACAAAGTGAAGATTATAAATTCATGGGTTTGTTCAAATACATTATTTTTATTATTAGTAGTATTCCTTCTTCTCTACTAGTTTGTTTTATTAATAAAAAATAAAATTGTGAAGGAATGATAGATTAGTGTGTGAAATAAAGTTTTGTTTATCATTTCAAACAAAAATAATGACAATATACAAATTTCATATTGTTACTATTATTATTATTATTATTATTATTTGGTTGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATGAAGCGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAAACAATAGAAAGTAAATAAATGAGAAATCTTATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAATTAACTNTTCTTCCTTCATAACTTGTGA]

[+] EMBL CD133809             [TCAACTATAAAATACAAAGTGAAGATTATAAATTCATGGGTTTGTTCAAATACATTATTTTTATTATTAGTAGTATTCCTTCTTCTCTACTAGTTTGTTTTATTAATAAAAAATAAAATTGTGAAGGAATGATAGATTAGTGTGTGAAATAAAGTTTTGTTTATCATTTCAAACAAAAATAATGACAATATACAAATTTCATATTGTTACTATTATTATTATTATTATTATTATTTGGTTGTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGTGTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATGAAGCGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAAACAATAGAAAGTAAATAAATGAGAAATCTTATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAATTAACTNTTCTTCCTTCATAACTTGTGA]




>consensus_8677#2
TCAACTATAAAATACAAAGTGAAGATTATAAATTCATGGGTTTGTTCAAATACATTATTT
TTATTATTAGTAGTATTCCTTCTTCTCTACTAGTTTGTTTTATTAATAAAAAATAAAATT
GTGAAGGAATGATAGATTAGTGTGTGAAATAAAGTTTTGTTTATCATTTCAAACAAAAAT
AATGACAATATACAAATTTCATATTGTTACTATTATTATTATTATTATTATTATTTGGTT
GTGTATCAGACAATCTAAGCTAAGTAGACATAATATCATTTTGTTTTGTAATGTATCAGT
GTAGCATACATACATGAAAGAATGTTTACTTTTTGTGTATAAATGTGAAGGTTCATGAAG
CGTCAGTAATGGGTATTTACTTTGAAAAAAAAACGAAAAACAGGACAGTTTAAATAAACA
ATAGAAAGTAAATAAATGAGAAATCTTATTTTTAGTTAAGATTTTTGTTTAATTCAGTTT
ATTTATATGACTTTTTCACCTGATTTATTCACAATCTATATGACTAAGATTGATCAATTA
ACTNTTCTTCCTTCATAACTTGTGA

consensusID : consensus_8677#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 484
fasta sequence

                              [TACTTAACCCTTTTTTTACATCTCCTTATTTTCACTCTCTTTTCAACTTTAATCATTTCCTTGCTATTTTTCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTTGTGTGAAGGAATGATAGATTAGTGTGTGAAATAAAGTTTTGTTTATCATTTCAAACAAAAATAATGACAATATACAAATTTCATATTGTTACTATTATTATTATTATTATTATTAGTAATAGCAGTAGTAGCAGTATTAGTAGTATTGTCAACGTATGGTAAAAAATATATATAAAATGAGTTTCATATTGAAAGTTTCAATATCATAAATGGTTTTATTTATTCTGACTTGTTAGATGTTTCTTATTGAAGTATTTCTGAATTTTGATTTATTTATTGATTGATTGACACTTTTTTGTTCTTTCTTTNTGCATCGTTGTCATCAACCTTTTTTTAAAAAAAATAATATACACT]

[+] EMBL CD131691             [TACTTAACCCTTTTTTTACATCTCCTTATTTTCACTCTCTTTTCAACTTTAATCATTTCCTTGCTATTTTTCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTTGTGTGAAGGAATGATAGATTAGTGTGTGAAATAAAGTTTTGTTTATCATTTCAAACAAAAATAATGACAATATACAAATTTCATATTGTTACTATTATTATTATTATTATTATTAGTAATAGCAGTAGTAGCAGTATTAGTAGTATTGTCAACGTATGGTAAAAAATATATATAAAATGAGTTTCATATTGAAAGTTTCAATATCATAAATGGTTTTATTTATTCTGACTTGTTAGATGTTTCTTATTGAAGTATTTCTGAATTTTGATTTATTTATTGATTGATTGACACTTTTTTGTTCTTTCTTTNTGCATCGTTGTCATCAACCTTTTTTTAAAAAAAATAATATACACT]




>consensus_8677#3
TACTTAACCCTTTTTTTACATCTCCTTATTTTCACTCTCTTTTCAACTTTAATCATTTCC
TTGCTATTTTTCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAA
ATTGTGTTTTGTGTGAAGGAATGATAGATTAGTGTGTGAAATAAAGTTTTGTTTATCATT
TCAAACAAAAATAATGACAATATACAAATTTCATATTGTTACTATTATTATTATTATTAT
TATTAGTAATAGCAGTAGTAGCAGTATTAGTAGTATTGTCAACGTATGGTAAAAAATATA
TATAAAATGAGTTTCATATTGAAAGTTTCAATATCATAAATGGTTTTATTTATTCTGACT
TGTTAGATGTTTCTTATTGAAGTATTTCTGAATTTTGATTTATTTATTGATTGATTGACA
CTTTTTTGTTCTTTCTTTNTGCATCGTTGTCATCAACCTTTTTTTAAAAAAAATAATATA
CACT

consensusID : consensus_8677#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 201
fasta sequence

                              [GTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTGGTTGTGTATCAGACAAATCTAAGCTAAGTAGACCTAATATCATTTTGTTTTGAAATGTAACAGTGTAGGCTTACATACACTTGAAGGATTGTTTACCTTTTTGTGTCATAAAATTGTGAATG]

[+] EMBL AW186600             [GTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATTTTATTATTATTATTATTTGGTTGTGTATCAGACAAATCTAAGCTAAGTAGACCTAATATCATTTTGTTTTGAAATGTAACAGTGTAGGCTTACATACACTTGAAGGATTGTTTACCTTTTTGTGTCATAAAATTGTGAATG]




>consensus_8677#4
GTAATCATCTCTGGGTATTTTGATTAAATTAACTCTTGTTTTGTTTCAGTAAAATCGATT
TTATTATTATTATTATTTGGTTGTGTATCAGACAAATCTAAGCTAAGTAGACCTAATATC
ATTTTGTTTTGAAATGTAACAGTGTAGGCTTACATACACTTGAAGGATTGTTTACCTTTT
TGTGTCATAAAATTGTGAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8677#0      CCTTTTGTTGTTGACCTATGTTGGGACGTTTTCTGGCCTTCTTTGTTAGCTCTTACCCCT 60
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
consensus_8677#3      ------------------------------------------------------------
consensus_8677#1      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TTATTGATTATTAAGATATAATTTTTTTAAAAACCGTTTATACTTTTTTCGTTTCCTATT 120
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
consensus_8677#3      ------------------------------------------------------------
consensus_8677#1      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TTTATTTAATATAAAGCCTTTCTTGTTATTATCATTTTTTTCTGACTTCACTGGTCTCTA 180
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
consensus_8677#3      ------------------------------------------------------------
consensus_8677#1      ------------------------------------------------------------
                                                                                  

consensus_8677#0      GTGCTTAGTATACAATTTTTCATGAAATACATACTTTGTTTCTTTTAAAAAGAAGACAAG 240
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
consensus_8677#3      ------------------------------------------------------------
consensus_8677#1      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TAAATATTTTCTATCCAATAAAAAGCTATTATCGTATTTATTCTTGCCTGGTCAACCTTT 300
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      ------------------------------------------------------------
consensus_8677#3      ------------------------------------------------TACTTAACCCTT 12
consensus_8677#1      ------------------------------------------------------------
                                                                                  

consensus_8677#0      CATGCTCATTTCTTATACTTGGACTCTTTCTCATTTTTTTTTTACTAGAATAACTGATAT 360
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      -TCAACTATAAAATACAAAGTGAAGATTATAAATTCATGGGTTTGTTCAAATAC-ATTAT 58
consensus_8677#3      TTTTTACATCTCCT-TATTTTCACTCTCTTTTCAACTTTAATCATTTCC-TTGCTATTTT 70
consensus_8677#1      ---------------TATTTTCACTCTCTTTTCAACTTTAATCATTTCC-TTGCTATTTT 44
                                                                                  

consensus_8677#0      CAATGTGGTACATGTTGACACTAAAATACAAATT-GTTGGTTTTGTATATCTTATGTCTA 419
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      TTTTATTATTAGTAGTATTCCTTCTTCTCTACTA-GTTTGTTTTATTAATAAAAAATAAA 117
consensus_8677#3      TCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTT 130
consensus_8677#1      TCAGGTTTTACATTGACTGACTCACTTTCTACAATGTGTATCTTCTTCAAATTGTGTTTT 104
                                                                                  

consensus_8677#0      GTC-------CTAGTGATTTTTGTT-TGTTTATTCATTTTTCTTCAATCT-GTA--ATCA 468
consensus_8677#4      ---------------------------------------------------GTA--ATCA 7
consensus_8677#2      ATT-------GTGAAGGAATG-ATA-GATTAGTGTGTGAAATAAAGTTTT-GTTT-ATCA 166
consensus_8677#3      GT--------GTGAAGGAATG-ATA-GATTAGTGTGTGAAATAAAGTTTT-GTTT-ATCA 178
consensus_8677#1      GTTTTTTTATGTGTGTGACTAAACACAATTTGATCATAATTCTACATTTTCGTTGGGTAG 164
                                                                         **    *  

consensus_8677#0      TCTCTGGGTATTTTGATTAAATTAA---CTCTTGTTTTGTTTCAGTAAAATCGATTTTAT 525
consensus_8677#4      TCTCTGGGTATTTTGATTAAATTAA---CTCTTGTTTTGTTTCAGTAAAATCGATTTTAT 64
consensus_8677#2      TTTCAAACAAAAATAATGACAATA----TACAAATTTCATATTGTTACTATTATTATTAT 222
consensus_8677#3      TTTCAAACAAAAATAATGACAATA----TACAAATTTCATATTGTTACTATTATTATTAT 234
consensus_8677#1      TGACTATATAAAGTAGAGGAAATATGGTGACATAATTGATGTAAATGAAAATATATGTAT 224
                      *  *     *   *      * **      *    **  * *   *   *       ***

consensus_8677#0      TATTATTATTATTTGGTTGTGTATCAGACAA-TCTAAGCTAA-GTAGACATAATATCATT 583
consensus_8677#4      TATTATTATTATTTGGTTGTGTATCAGACAAATCTAAGCTAA-GTAGACCTAATATCATT 123
consensus_8677#2      TATTATTATTATTTGGTTGTGTATCAGACAA-TCTAAGCTAA-GTAGACATAATATCATT 280
consensus_8677#3      TATTATTATTAGTAATAGCAGTAGTAG-------CAGTATTA-GTAG---TATTGTCAAC 283
consensus_8677#1      TACTGATAAAATGTAAAACCGAATTATACAAAGGAAAAGTAATGTGAAGATATGATTCTT 284
                      ** *  **  *         * *  *         *   * * **     **   *    

consensus_8677#0      TTGTTTTGTAATGTATCAGTGTAG-CATACATACA--TGAAAGAATGTTTAC-TTTTTGT 639
consensus_8677#4      TTGTTTTGAAATGTAACAGTGTAGGCTTACATACACTTGAAGGATTGTTTACCTTTTTGT 183
consensus_8677#2      TTGTTTTGTAATGTATCAGTGTAG-CATACATACA--TGAAAGAATGTTTAC-TTTTTGT 336
consensus_8677#3      GTATGGTAAAAAATATATATAAAATGAGTTTCATA-TTGAAAG----------TTTCAAT 332
consensus_8677#1      TAGTTTGTAGGATTATCAGTAGTATTTTGGTTAC---TGAAAAATAACTTAAGTATGAAT 341
                         *         **    *            *    ****            * *   *

consensus_8677#0      G-T-ATAAA--TGTGAAGGTTCATGAAGCGTCAG-----TAATGGGTATTTAC-TTTGAA 689
consensus_8677#4      G-TCATAAAATTGTGAATG----------------------------------------- 201
consensus_8677#2      G-T-ATAAA--TGTGAAGGTTCATGAAGCGTCAG-----TAATGGGTATTTAC-TTTGAA 386
consensus_8677#3      A-TCATAAA--TGGTTTTATTTATTCTGACT--------TGTTAGATGTTTCT-TATTGA 380
consensus_8677#1      AATGATGACCCTTTACAGTCTCATATCAGTTGAAAAGTTTGAAAAAAATTTATATATCGT 401
                        * ** *   *                                                

consensus_8677#0      AAAAA-AACGAAAAACAGGACAGTTTAAATAAACANTAGAAAGTAAATAAATGAGAATAC 748
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      AAAAA-AACGAAAAACAGGACAGTTTAAATAAACAATAGAAAGTAAATAAATGAGAAATC 445
consensus_8677#3      AGTAT-TTCTGAATTTTGATTTATTTAT-TGATTGATTGACACTTTTTTGTTCTTTCTTT 438
consensus_8677#1      ATTACCTTTTTAAAACACTTAAAATGGTTCACAGAATCACCAGTGGTAATTTACAGTTGT 461
                                                                                  

consensus_8677#0      TT--ATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGA 806
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      TT--ATTTTTAGTTAAGATTTTTGTTTAATTCAGTTTATTTATATGACTTTTTCACCTGA 503
consensus_8677#3      NTGCATCGTTGTCATCAACCTTTTTTTAAAAAAAATAATATACACT-------------- 484
consensus_8677#1      GTATGACTTTTCTTTCCGTTTTTTTTCCAGTCAACAAATACACATAGAATAAACGTATGT 521
                                                                                  

consensus_8677#0      TTTATTCACAATCTATATGACTAAGATTGATCAANTTACTTTTCTTCCTTCATAACTTGN 866
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      TTTATTCACAATCTATATGACTAAGATTGATCAATTAACTNTTCTTCCTTCATAACTTGT 563
consensus_8677#3      ------------------------------------------------------------
consensus_8677#1      TTTAACTAGTCAATTGAATAATATGGAAAAGGAAATATAAATTG---------------- 565
                                                                                  

consensus_8677#0      GAAGGTATTCTCTTTTTTGTATTTGTATGCATTGCGCAATTAGAAACTTTAACATATGAA 926
consensus_8677#4      ------------------------------------------------------------
consensus_8677#2      GA---------------------------------------------------------- 565
consensus_8677#3      ------------------------------------------------------------
consensus_8677#1      ------------------------------------------------------------
                                                                                  

consensus_8677#0      TATTGGNTGCTAGNNTATACTTTCTATATATATAG 961
consensus_8677#4      -----------------------------------
consensus_8677#2      -----------------------------------
consensus_8677#3      -----------------------------------
consensus_8677#1      -----------------------------------