These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8815#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 767 fasta sequence [TGTATTGAATTGGCATAAATTTATGTCATGAATATATAAATGTAGTTGTCCAGCTTCAGTGGCGAAAACGACACAATTCCCATTTTGTGATAGATCTGTGGCAA-CTAGTCGGTCGTAACCTAACCACAATTGACCTAAATCATTGGGGGAAAACGCAATTTTACCCCATTGTATAGTTTGAAAAGCACCAGTTTGTGAAGTAGCCAATAAACTATCACTGCAACCAGGTATAAATCGAACAAAACATGGATCTAGTGATGAAGAGAGTGGGACTTGAGCACGACCCGACCGAAGATCATATACTCTCAACAAGCGGTCCACACGTAATCCAGAATCACCGACACGTGACCATCCACAAGTGACCAATGTATGACTATTCGCATCAACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATACCATGACTGGTTCGTGAATCGATTATCATAACTTTTCCATTTGTATTTCCAGCGCATAAGCCACCACTGAATGGTCGAAGCACTACAGACCTACTATTTGC-ACATNCGTTGTATTGATTACTTCACCCCAACGTTCTACGGCATCTACTTATAGTAGGGTTGGTTGAAGACCACCCAAGAAAAATCGTGCAAAATTCCCCAGACCATTACCAGCTCCTGTAATACCGGACCCACTCATCAAGGTACCAGTAGGACCAGTTACAGCTAAACATTCTAACTCCAGCATGGATTTATGTATAAAAACAGTTGACTAGTCTCCCACTCGCCTTAA] [+] EMBL CD128168 [TGTATTGAATTGGCATAAATTTATGTCATGAATATATAAATGTAGTTGTCCAGCTTCAGTGGCGAAAACGACACAATTCCCATTTTGTGATAGATCTGTGGCAA CTAGTCGGTCGTAACCTAACCACAATTGACCTAAATCATTGGGGGAAAACGCAATTTTACCCCATTGTATAGTTTGAAAAGCACCAGTTTGTGAAGTAGCCAATAAACTATCACTGCAACCAGGTATAAATCGAACAAAACATGGATCTAGTGATGAAGAGAGTGGGACTTGAGCACGACCCGACCGAAGATCATATACTCTCAACAAGCGGTCCACACGTAATCCAGAATCACCGACACGTGACCATCCACAAGTGACCAATGTATGACTATTCGCATCAACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATACCATGACTGGTTCGTGAATCGATTATCATAACTTTTCCATTTGTATTTCCAGCGCATAAGCCACCACTGAATGGTCGA ] [-] EMBL CD128146 [ TATTGAATTGGCATAAATTTATGTCATGAATATATAAATGTAGTTGTCCAGCTTCAGTGGCGAAAACGACACAATTCCCATTTTGTGATAGATCTGTGGCAA CTAGTCGGTCGTAACCTAACCACAATTGACCTAAATCATTGGGGGAAAACGCAATTTTACCCCATTGTATAGTTTGAAAAGCACCAGTTTGTGAAGTAGCCAATAAACTATCACTGCAACCAGGTATAAATCGAACAAAACATGGATCTAGTGATGAAGAGAGTGGGACTTGAGCACGACCCGACCGAAGATCATATACTCTCAACAAGCGGTCCACACGTAATCCAGAATCACCGACACGTGACCATCCACAAGTGACCAATGTATGACTATTCGCATCAACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATACCATGACTGGTTCGTGAATCGATTATCATAACTTTTCCATTTGTATTTCCAGCGCATAAGCCACCACTGAATGGTCGAA ] [-] EMBL CD127651 [ TATTGAATTGGCATAAATTTATGTCATGAATATATAAATGTAGTTGTCCAGCTTCAGTGGCGAAAACGACACAATTCCCATTTTGTGATAGATCTGTGGCAA CTAGTCGGTCGTAACCTAACCACAATTGACCTAAATCATTGGGGGAAAACGCAATTTTACCCCATTGTATAGTTTGAAAAGCACCAGTTTGTAAAGTAGCCAATAAACTATTACTGCAACCAGGTATAAATCGAACAAAACATGGATCTAGTGATGAAGAGAGTGGGACTTGAGCACGACCCGACCGAAGATCATATACTCTCAACAAGCGGTCCACACGTAATCCAGAATCACCGACACGTGACCATCCACAAGTGACCAATGTATGACTATTCGCATCAACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATACCATGACTGGTTCGTGAATCGATTATCATAACTTTTCCATTTGTATTTCCAGCGCATAAGCCACCACTGAAgataaaa ] [+] EMBL CD161574 [ ACGACACAATTCCCATTTTGTGATACATCTGTGGCAACCTAGTCGGTCGTAACCTAACCACAATTGACCTAAATCATTGGGGGAAAACGCAATTTTACCCCATTGTATAGTTTGAAAAGCACCAGTTTGTGAAGTAGCCAATAAACTATCACTGCAACCAGGTATAAATCGAACAAAACATGGATCTAGTGATGAAGAGAGTGGGACCTGAGCACGACCCGACCGAAGATCATATACTCTCAACAAGCGGTCCACACGTAATCCAGAATCACCGACACGTGACCATCCACAAGTGACCAATGTATGACTATTCGCATCAACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATGCCATGACTGGTTCGTGAATCGATTATCACAACTTTTCCATTTGTAT ] [-] EMBL CD127572 [ AAGCACCAGTTTGTGTAGAAGACAATAAACTATCACTGCAACCAGGTATAAATCGAACAAAACATGGATCTAGTGATGAAGAGAGTGGGACTTGAGCACGACCCGACCGAAGATCATATACTCTCAACAAGCGGTCCACACGTAATCCAGAATCACCGACACGTGACCATCCACAAGTGACCAACGTGTTACTATTCGCATCCACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATACCATGACTGGTTCGTGAATCGATTATCATAACTTTTCCATTTGTATTTCCAGCGCATAAGCCACCACTGAATGGTCGAAGCACTACAGACCTACTATTTGC ACATNCGT ] [-] EMBL CD155121 [ TCAACTGTCATATCAGAGATTTCACCAGTATGTGCATCTAATTCACGTACAATACCATGACTGGTTCGTGAATCGATTATCATAACTTTTCCATTTGTATTTCCAGCGCATAAGCCACCACTGAATGGTAGAAGCACTACAGACCCACCAATTCCAACATCTATTGTATTGATTACTTCACCCCAACGTTCTACGGCATCTACTTATAGTAGGGTTGGTTGAAGACCACCCAAGAAAAATCGTGCAAAATTCCCCAGACCATTACCAGCTCCTGTAATACCGGACCCACTCATCAAGGTACCAGTAGGACCAGTTACAG ] [-] EMBL CD152511 [ tnTACTTCTAGTAGGGTTGGTTGAAGACCACCCAAGAAAAATCGTGCAAAATTCCCCAGACCATTACCAGCTCCTCTAATACCGGACCCACTCATCAAGGTACCAGTAGGACCAGTTACAGCTAAACATTCTAACTCCAGCATGGATTTATGTATAAAAACAGTTGACTAGTCTCCCACTCGCCTTAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||