These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8845#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1147 fasta sequence [CTTTTCGAACTGTTAGCCGCTGAAGGTTTTAGTGATCTTGGGATTTATTTTATTGTCAGTCGCAATTATGGTTGCAGACTACTCTTTTCACTAATTCGACTTACAAACTCAACATTTGGCTTAATCTAGTGTTTGAGATGTGATGCTCCGTGTTGATTGTTGAGGAGACCACTGGCTTGGAGTTATAATTCAGTTTACCTAATAAATCCTACTGGCTTATCAGCTGAAAGCATTTACACATCTTATACGAGACTATTTTCCGAGCTTTTAACTGCCCTCGCACTACTTTATTTCAACAAAGAAACGGATATTCATTACAATGCTTCGCAAAATTCATAGTTGGTCAGCCAGAAAGCGTCTTAGTGGATCAAGCTACCCATTAAGAAGAAAAGATCCTAAAACAACCCCAACAAGGACTAAAAAGCACCAAAAATGTATAAATTTCCGAAAATCCAGTCGCAAACCGACGGGACTACCGTCAGTCGCAAAACCAAGAGCGCGGAAAGTCCACAAAGCACCTATCCCGGAATCTCAAAGTGTGACTAACCAAAATCTGCCAGATGATGTAGATATTCAGGTCCCTTCAGTTTGTAATCATCATAATTCTGCTCATACGAAAATTCA-CCGTAATAACTTCATAGACCCTCCAAATTTACCTTCACCGTAGTGTGTAACTGATTCTTGTGAAAATGCTAACGAACAGTTATATCATA-ACTGTCAAAAC-CTTCATGATAATTCAGAAAATGATCGTATATTATCAGAGCTACAAAGTACATCGAAAACAGAATCATTGGTGGAAATTAGTACAAACAATTACTTACCTGTAAAACCAAACCCAAGTGTTACGCTTATTGAATGCACTGAGCGATTTACTTTTCCGAATTCGATTACCAGTTCAAATCAACAAGTCGATTCATCTAATGACATTAAACCTCACTTATTCAAAGAGGTTGGATTTATTGGCGAGGATGAAACTATGCAGCCTTCCGACGAGGAAAGTGAACCAAGCGATTCTTCGTCTTCTATCGCTCCTCCGCAAGAACTTTCTACGGAAATCTCTGCAATTGAAGAGTGCGATGACGGAGATTTCGAAGAAGCTGATGCATATGCCTTCATCCGCAGCCTCCCACCACTGCCTCCTGATATT] [+] EMBL CD178453 [CTTTTCGAACTGTTAGCCGCTGAAGGTTTTAGTGATCTTGGGATTTATTTTATTGTCAGTCGCAATTATGGTTGCAGACTACTCTTTTCACTAATTCGACTTACAAACTCAACATTTGGCTTAATCTAGTGTTTGAGATGTGATGCTCCGTGTTGATTGTTGAGGAGACCACTGGCTTGGAGTTATAATTCAGTTTACCTAATAAATCCTACTGGCTTATCAGCTGAAAGCATTTACACATCTTATACGAGACTATTTTCCGAGCTTTTAACTGCCCTCGCACTACTTTATTTCAACAAAGAAACGGATATTCATTACAATGCTTCGCAAAATTCATAGTTGGTCAGCCAGAAAGCGTCTTAGTGGATCAAGCTACCCATTAAGAAGAAAAGATCCTAAAACAACCCCAACAAGGACTAAAAAGCACCAAAAATGTATAAATTTCCGAAAATCCAGTCGCAAACCGACGGGACTACCGTCAGTCGCAAAACCAAGAGCGCGGAAAGTCCACAAAGCACCTATCCCGGAATCTCAAAGTGTGACTAACCAAAATCTGCCAGATGATGTAGATATTCAGGTCCCTTCAGTTTGTAATCATCATAATTCTGCTCATACGANAATTCANCCGT ATAACTTCATAGACCC ] [-] EMBL CD159262 [ TTTCGAACTGTTAGCCGCTGAAGGTTTTAGTGATCTTGGGATTTATTTTATTGTCAGTCGCAATTATGGTTGCAGACTACTCTTTTCACTAATTCGACTTACAAACTCAACATTTGGCTTAATCTAGTGTTTGAGATGTGATGCTCCGTGTTGATTGTTGAGGAGACCACTGGCTTGGAGTTATAATTCAGTTTACCTAATAAATCCTACTGGCTTATCAGCTGAAAGCATTTACACATCTTATACGAGACCATTTTCCGAGCTTTTAACTGCCCTCGCACTACTTTATTTCAACAAAGAAACGGATATTCATTACAATGCTTCGCAAAATTCATAGTTGGTCAGCCAGAAAGCGTCTTAGTGGATCAAGCTACCCATTAAGAAGAAAAGATCCTAAAA ] [+] EMBL CD188253 [ GATCTTGGGATTTATTTTATTGTCAGTCGCAATTATGGCTGCAGACTACTCTTTTCACTAATTCGACTTACAAACTCAACATTTGGCTTAATCTAGTGTTTGAGATGTGATGCTCCGTGTTGATTGTTGAGGAGACCACTGGCTTGGAGTTATAATTCAGTTTACCTAATAAATCCTACTGGCTTATCAGCTGAAAGCATTTACACATCTTATACGAGACTATTTTCCGAGCTTTTAACTGCCCTCGCACTACTTTATTTCAACAAAGAAACGGATATTCATTACAATGCTTCGCAAAATTCATAGTTGGTCAGCCAGAAAGCGTCTTAGTGGATCAAGCTACCCATTAAGAAGAAAAGATCC ] [+] EMBL CD069353 [ TCCAGTCGCAAACCGACGGGACTACCGTCAGTCGCAAAACCAAGAGCGCGGAAAGTCCACAAAGCACCTATCCCGGAATCTCAAAGTGTGACTAAACAAAATCTGCCAGATGATGTAGATATTCAGGTCCCTTCAGTTAGTAATCATCATAATTCTGCTCATACGAAAATTCA CCGTAATAACTTCATAGACCCTCCAAATTTACCTTCACCGTAGTGTGTAACTGATTCTTGTGAAAATGCTAACGAACAGTTATATCATA ACTGTCAAAAC CTTCATGATAATTCAGAAAATGATCGTATATTATCAGAGCTACAAAGTACA ] [-] EMBL CD183296 [ CGTCAGTCGCAAAACCAAGAGCGCGGAAAGTCCACAAAGCACCTATCCCGGAATCTCAAAGTGTGACTAACCAGAATCTGCCAGATGATGTAGATATTCAGGTCCCTTCAGTTTGTAATCATCATAATTCTGCTCATACGAAAATTCA CCGTAATAACTTCATAGACCCTCCAAATTTACCTTCACCGTTGTGTGTTTCTGATTCTTGTGAAAATGCTAACGAACAGTTACATCATA ACTGTCAAAAC CTTCATGATAATTCAGAAAATGATCGTATATTATCAGAGCTACAAAGTACATCGAAAACAGAATCATTGGTGGAAATTAGTACAAACAATTACTTACCTGTAAAACCAAACCCAAGTGTTACGCTTATTGAATGCACTGAGCGATTTACTTTTCCGA ] [+] EMBL CD202465 [ GTTATATCATATGCTGTCAAACCTCTTGATGATAATTCAGAAAATGATCGTATATTATCAGAGCTACAAAGCACATCGAACACAGAATCATTGGTGGAAATTAGCACAAACAATTACTTACCTGTAAAACCAAACCCAAGTGTTACGCTTATTGAATGCACTGAGCGATTTACCTTTCCGAATTCGATTACCAGTTCAAATCAACAAGTCGATTCATCTAATGACATTAAACCTCACTTATTCAAAGAGGTTGGATTTATTGGCGAGGATGAAACTATGCAGCCTTCCGACGAGGAAAGTGAACCAAGCGATTCTTCGTCTTCTATCGCTCCTCCGCAAGAACTTTCTACGGAAATCTCTGCAATTGAAGAGTGCGATGACGGAGATTTCGAAGAAGCTGATGCATATGCCTTCATCCGCAGCCTCCCACCACTGCCTCCTGATATT] [-] EMBL CD198008 [ CGCTTATCGAATGCACTGAGCGATTTACTTTTCCGAATTCGATTACCAGTTCAGATCAACAAGTCGATTCATCTAATGACATTAAACCTCACTTATTCAGAGAGGTTGGATTCATTGGCGAGGATGAAACTATGCAGCCTTCCGACGAGGAAAGTGAACCAAGCGATTCTTCGTCTTCTATCGCTCCTCCGCAAGAACTTTCTACGGAAATCTCTGCAATTGAAGAGTGCGATGACGGAGATTTCGAAGAAGCTGATGCATATGCCTTCATCCGCAGCCTCCCACCACTGCCTCCTGAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||