These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8863#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 805 fasta sequence [TGACGTTTAGTTGGTTAGAAGATAGTAACTGTGGATCAGAAGATTTGACTCGGATCGCTAACAACGCTCTATCCTTAATTAACGTCGAACCTTACATTCGAAATATTCATGAAATTACTCCTGCTTTCGTCTTTGACTTAGCAGTTGTCTTATTTGGTAGCGACATTTTGCCTCGTCGTGGTCGCGCTGAGACTGAATGTATAGAAAATTTCGAGGCTAT-TGTGTTAAAATTGTCTGAGGAAATAGGAGTGGACTTGGA-TCACATTGTACCAGAAGATCTTATGGTTGGAGAACCTAGAGCATTGTCAGATTTTCTTGTTCTTCTCGC-TGCATTCATCGCCTATTGTCGTGAATCGAACCTCTTGGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGAAGCGGACTCCAGCATCTTTCCAAACTCGAAACCCTTATCCACCCCTGGATAATGTCAATTCATTATTACAGAAATCAAATTTATTTGCAGTCCAATCGGATAATGTGAAACCGAGTTATCCTGTTGCTTCATGTCTTTCCAATTTCTTAGAGGTACATACAGACACTTCACCTCCGGCAACACCAAATGCAATGAATGGATATCTAGAGATCGTCCCTTCTAATTTTTCCGA] [+] EMBL AI975684 [TGACGTTTAGTTGGTTAGAAGATAGTAACTGTGGATCAGAAGATTTGACTCGGATCGCTAACAACGCTCTATCCTTAATTAACGTCGAACCTTACATTCGAAATATTCATGAAATTACTCCTGCTTTCGTCTTTGACTTAGCAGTTGTCTTATTTGGTAGCGACATTTTGCCTCGTCGTGGTCGCGCTGAGACTGAATGTATAGAAAATTTCGAGGCTAT TGTGTTAAAATTGTCTGAGGAAATAGGAGTGGACTTGGA TCACATTGTACCAGAAGATCTTATGGTTGGAGAACCTAGAGCATTGTCAGATTTTCTTGTTCTTCTCGC TGCATTCATCGCCTATTGTCGTGAATCGAACCTCTTGGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATG ] [+] EMBL CD098481 [ GAGACTGAATGTTTAGAACATTCCCAGGCCATATGTGTTAAAATTGTCTGAGGAAATAGGATTGGACTTGGAGTCACATTGTACCAGAAGATCTTATGGTTGGAGAACCTACAGCATTGTCAGATTTTCTTGTTCTTCTCGCGTGCATTCATCGCCTATTGTCGTGACTCGAACCTCGGTGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATATCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGAAGCGGACTCCAGCATCTTTCCAAACTCGAAACCCTTATCCACCCCTTGATAATGTCAATTCATTATTACAGGAATCAAATTTATTTGCAGTCCAATCGGATAATGTGA ] [+] EMBL CD124147 [ AGAAAATTTCGAGGCTAT TATGTTAAAATTGTCTGAGGAAATAGGAGTGGACTTGGA TCACATTGTACCAGAAGATCTTATGGTTGGAGAACCTAGAGCATTGTCAGATTTTCTTGTTCTTCTCGC TGCATTCATCGCCTATTGTCGTGAATCGAACCTCTTGGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGAAGCGGACTCCAGCATCTTTCCAAACTCGAAACCCTTATCCACCCCTGGATAATGTCAATTCATTATTACAGAAATCAAATTTATTTGCAGTCCAATCGGATAATGTGAAACCGAGTTATCCTGTTGCTTCATGTCTTTCCAATTTCTTAGAGGTACATACAGACACTTCACCTCCGGCAACACCAAATGCAATGAATGGATATCTAGAGATCGTCCCTTCTAATTTTTCCGA] [+] EMBL CD124121 [ AGAAAATTTCGAGGCTAT TGTGTTAAAATTGTCTGAGGAAATAGGAGTGGACTTGGA TCACATTGTACCAGAAGATCTTATGGTTGGAGAACCTAGAGCATTGTCAGATTTTCTTGTTCTTCTCGC TGCATTCATCGCCTATTGTCGTGAATCGAACCTCTTGGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGAAGCGGACTCCAGCATCTTTCCAAACTCGAAACCCTTATCCACCCCTGGATAATGTCAATTCATTATTACAGAAATCAAATTTATTTGCAGTCCAATCGGATAATGTGAAACCGAGTTATCCTGTTGCTTCATGTCTTTCCAATTTCTTAGAGGTACATACAGACACTTCACCTCCAGCAACACCAAATGCAATGAATGGATATCTAGAGATCGT ] [+] EMBL CD138219 [ AGAAAATTTCGAGGCTAT TGTGTTAAAATTGTCTGAGGAAATAGGAGTGGACTTGGA TCACATTGTACCAGAAGATCTTATGGTTGGAGAACCTAGAGCATTGTCAGATTTTCTTGTTCTTCTCGC TGCATTCATCGCCTATTGTCGTGAATCGAACCTCTTGGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGAAGCGGACTCCAGCATCTTTCCAAACTCGAAACCCTTATCCACCCCTGGATAATGTCAATTCATTATTACAGAg ] [+] EMBL CD138225 [ aaAAGATTACTAGGCTAT TGATTTAAAATTGCCTGAGGAAATACGAGTGGACTTGGA TCACATTGTACCAGAAGATCTTATGGTTAGAGAACCTAAAGCATTGTCAAATCTTCTTGTTCTTCTCAC TCCATTCATCGGCTATTGTCGTGAATCGAACCTCTTGGAGCTTCGAATATCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGGAGCCGACTCCATCATC ] [-] EMBL CD111091 [ TCAACCTGTGAGTCGTCTTTTGAGTGTTCTGGCGGCTTGATTTCCAACTCAAAATTAACTTCAAAGACGAAGGAATTTCTGGAATGCCAGTTGTCTACTTCTCCTGAATTACCACGTCATAGTGTGACTTGTGCACCCATGTTTTCTACATCTTTCCACCAATCTGGTCAATCTATAGATCAAAGTACACCAGTGAAGCGGACTCCAGCATCTTTCCAAACTCGAAACCCTTATCCACCCCTGGATAATGTCAATTCATTATTACAGAAATCAAATTTATTTGCAGTCCAATCGGATAATGTGAAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||