These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8915#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 345 fasta sequence [TGCCGGGTATGTCATAGGGGTCAAAGTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTTATATAAAACATAAATAACAGGTGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAGCTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAACGGATGGTTGACAGATCCAAAGCCAGAATATTGGTACTCCGCGCCA] [+] EMBL CD141603 [TGCCGGGTATGTCATAGGGGTCAAAGTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTTATATAAAACATAAATAACAGGTGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAGCTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAGCGGATGGTTGACAGATCC AAGCCAGAATATTGGTACTCCGCGCCA] [+] EMBL CD141533 [TGCCGGGTATGTCATAGGGGTCAAAGTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTTATATAAAACATAAATAACAGGTGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAGCTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAACGGATGGTTGACAG ] [+] EMBL CD141254 [TGCCGGGTATGTCATAGGGGTCAAAGTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTTATATAAAACATAAATAACAGGCGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAGCTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAACGGATGGTTGACAGATCCAAAGCCAG ] [+] EMBL CD188928 [ GGGGTCAAAGTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTTATATAAAACATAAATAACAGGTGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAGCTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAACGGATGGTTGACAGATCCAAAGCCAGAATATTGGTACTCCGCGCC ] [+] EMBL BG931229 [ GTCAAACTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTCATATAAAACATAAATAACAGGTGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTGTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAACTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAACGGATGGTTGACAGATCCAGACCC ] [+] EMBL BG931313 [ GTCAAAGTAGTTAACATGCTTCTTGGTTTTCTTCATTTCGTGCCCTTTATATAAAACATAAATAACAGGTGGGGTGCAAATAAAAAGGCCGACAATGTAAAACTTCAAAAAAGGCCTGTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGTAGCTGTCCATGGGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACAACGGATGGTTGACAGA ] [+] EMBL CD142540 [ GTTTTTATAAACATCAACAAATGGAAACTGGCGAATCTTGGCAGGAGCTGTCCATGGTGAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTGTCTGCATTACGGATTCCATGA ] [+] EMBL CD141608 [ cGTAAACCATTTGACGAGAACTACTCTTCATATAATCCTCAATTTTCTGCATTACGGATTCCATGAAGCTTTTATAGTAACTCATCATCCTGAAGTAACATTAACGACGGATGGTTGACAGATCCAAAGCCAG ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||