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Schistosoma mansoni
cluster # 8939 cluster # 8939       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8939#0 length = 945 sequences # 2  
consensus_8939#1 length = 748 sequences # 4  
consensus_8939#2 length = 696 sequences # 2  

consensusID : consensus_8939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 945
fasta sequence
                              [TTTAGTCTTTTCAACTTTTCAACTACAGTGAATTGAATCGTTCGAATAACCCTCAGAATCAGTGCACCAAAGTGTGTAGTGGTTGATAAACCCTCCGTATCTGTCTCATCAATAAAGCTCGAACTGTTGGATATCCAACATTTATATATCAAGTCTACTCCTTACNAGCAGTCAACCTCTGAAGTTTGTTACCGGCTGAGTTCGTCCAAACAACTTCGCTGGAGTCCTTTGGGAGAAAACTTGACGTTTTTGAGGACTCGGCGATATTTCATTTTTTTGCCGTAATGCGTAGTCACTTCACTGAACAAGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTGAATCCGTAACGGTTGAGAAGGATTTGAAGCCTAATGGTGTTTATCAACCACCACACTTGACTCCAGTCTTCTTTGAGGAAGGCAAGAAAAAACCGTCAATAGAAAGGGCCAAGCTGAGAGCGGCTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAATGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTNGAAATACANNAACAGAGAAGCGAATTGAACGCTCTNTACTCCNACGTGGGTTATCCGATACTTNCTCANNNGACTGAACAATGCAANTACTNNTTACAAGNNTCGATGAAGAATTGGNAATATAACCNGCCNNCACAANNGNGANGNNTNGNNTGTATACTAATGGATGAATTTANAAAAAGAGAACAGCTGAAGCGTTAAGACGCAAAAAGGGCGTCAAAAGAACTANTNNGGNTTTGGGNTACAATGTTTCAATCCAG]

[+] EMBL AA559830             [TTTAGTCTTTTCAACTTTTCAACTACAGTGAATTGAATCGTTCGAATAACCCTCAGAATCAGTGCACCAAAGTGTGTAGTGGTTGATAAACCCTCCGTATCTGTCTCATCAATAAAGCTCGAACTGTTGGATATCCAACATTTATATATCAAGTCTACTCCTTACNAGCAGTCAACCTCTGAAGTTTGTTACCGGCTGAGTTCGTCCAAACAACTTCGCTGGAGTCCTTTGGGAGAAAACTTGACGTTTTTGAGGACTCGGCGATATTTCATTTTTTTGCCGTAATGCGTAGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD080547             [                                                              TGCACCAAAGTGTGTAGTGGTTGATAAACCCTCCGTATCTGTCTCATCAATAAAGCTCGAACTGTTGGATATCCAACATTTATATATCAAGTCTACTCCTTACGAGCAGTCAACCTCTGAAGTTTGTTACCGGCTGAGTTCGTCCAAACAACTTCGCTGGAGTCCTTTGGGAGAAAACTTGACGTTTTTGAGGACTCGGCGATATTTCATTTTTTTGCCGTAATGCGTAGTCACTTCACTGAACAAGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTGAATCCGTAACGGTTGAGAAGGATTTGAAGCCTAATGGTGTTTATCAACCACCACACTTGACTCCAGTCTTCTTTGAGGAAGGCAAGAAAAAACCGTCAATAGAAAGGGCCAAGCTGAGAGCGGCTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAATGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTNGAAATACANNAACAGAGAAGCGAATTGAACGCTCTNTACTCCNACGTGGGTTATCCGATACTTNCTCANNNGACTGAACAATGCAANTACTNNTTACAAGNNTCGATGAAGAATTGGNAATATAACCNGCCNNCACAANNGNGANGNNTNGNNTGTATACTAATGGATGAATTTANAAAAAGAGAACAGCTGAAGCGTTAAGACGCAAAAAGGGCGTCAAAAGAACTANTNNGGNTTTGGGNTACAATGTTTCAATCCAG]


>consensus_8939#0 TTTAGTCTTTTCAACTTTTCAACTACAGTGAATTGAATCGTTCGAATAACCCTCAGAATC AGTGCACCAAAGTGTGTAGTGGTTGATAAACCCTCCGTATCTGTCTCATCAATAAAGCTC GAACTGTTGGATATCCAACATTTATATATCAAGTCTACTCCTTACNAGCAGTCAACCTCT GAAGTTTGTTACCGGCTGAGTTCGTCCAAACAACTTCGCTGGAGTCCTTTGGGAGAAAAC TTGACGTTTTTGAGGACTCGGCGATATTTCATTTTTTTGCCGTAATGCGTAGTCACTTCA CTGAACAAGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAA CCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTGAAT CCGTAACGGTTGAGAAGGATTTGAAGCCTAATGGTGTTTATCAACCACCACACTTGACTC CAGTCTTCTTTGAGGAAGGCAAGAAAAAACCGTCAATAGAAAGGGCCAAGCTGAGAGCGG CTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTTT ATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAATGAAAGAAAAACAGAATTA TGAGGAAGAAAACTTCACCCGTCTNGAAATACANNAACAGAGAAGCGAATTGAACGCTCT NTACTCCNACGTGGGTTATCCGATACTTNCTCANNNGACTGAACAATGCAANTACTNNTT ACAAGNNTCGATGAAGAATTGGNAATATAACCNGCCNNCACAANNGNGANGNNTNGNNTG TATACTAATGGATGAATTTANAAAAAGAGAACAGCTGAAGCGTTAAGACGCAAAAAGGGC GTCAAAAGAACTANTNNGGNTTTGGGNTACAATGTTTCAATCCAG



consensusID : consensus_8939#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 748
fasta sequence
                              [TGTGGTGTAGTAGGTTTCTTCACGTTCGATAATAGAACGTCATGCGTTGTGATTGCGTTTATAGAACCATTATTAATATCTTCATACGTGAAACAGAAATATTTACCATTTGGCAAAATCATTTATATCACCAATCGGTCTGCTGAAAAGTTGAATATTAAGTTGTTTTCCCCCAAATTCCATTTAAAACCCCGGGTCTTAGGCTGTAGACTAAAATATCTTGTCTGATTTGTA-GCGCAAAGTACTTTACCATACTGTGCTCTTTTACGTTTTCCGAATGATCTGCTAATAATCTTTATAGTTTTTCAAATGGAAGTAGGATTACTTTTCCAGGCTACACAAGATTCTTTACGAAACAATAGGCATATCTACCCATGACAGTTACGAAATTAGCGGGGATTCTATTTTCCTTGACATTATGTGACAGACACCAAATCTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAACTGTAGTTTACCTTTAGATTTTTCTGTCCTTCAGTTTTTGCCGTAATGCGTAGTCACTTCACTGAACAGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAACCGAGTTAAGCCAAACCTTGTAGATTTGTGTACGTTTTTCCAGTTGCCTTTCGTATTGTTAAATTAGACCATATCAGGAGGCCAGTATG]

[+] EMBL CD088966             [TGTGGTGTAGTAGGTTTCTTCACGTTCGATAATAGAACGTCATGCGTTGTGATTGCGTTTATAGAACCATTATTAATATCTTCATACGTGAAACAGAAATATTTACCATTTGGCAAAATCATTTATATCACCAATCGGTCTGCTGAAAAGTTGAATATTAAGTTGTTTTCCCCCAAATTCCATTTAAAACCCCGGGTCTTAGGCTGTAGACTAAAATATCTTGTCTGATTTGTA GCGCAAAGTACTTTACCATACTGTGCTCTTTTACGTTTTCCGAATGATCTGCTAATAATCTTTATAGTTTTTCAAATGGAAGTAGGATTACTTTTCCAGGCTACACAAGATTCTTTACGAAACAATAGGCATATCTACCCATGACAGTTACGAAATTAGCGGGGATTCTATTTTCCTTGACATTATGTGACAGACACCAAATCTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAACTGTAGTTTACCTTTAGATTTTTCTGTCCTTCAGTTTTTGCCGTAATGCGTAGTCACTTCACTGAACAGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAACCGAGTTAAGCCAAACCTTGTAGATTTGTGTACGTTTTTCCAGTTGCCTTTCGTATTGTTAAATTAGACCATATCAGGAGGCCAGTATG]
[+] EMBL CD088896             [TGTGGTGTAGTAGGTTTCTTCACGTTCGATAATAGAACGTCATGCGTTGTGATTGCGTTTATAGAACCATTATTAATATCTTCATACGTGAAACAGAAATATTTACCATTTGGCAAAATCATTTATATCACCAATCGGTCTGCTGAAAAGTTGAATATTAAGTTGTTTTCCCCCAAATTCCATTTAAAACCCCGGGTCTTAGGCTGTAGACTAAAATATCTTGTCTGATTTGTA GCGCAAAGTACTTTACCATACTGTGCTCTTTTACGTTTTCCGAATGATCTGCTAATAATCTTTATAGTTTTTCAAATGGAAGTAGGATTACTTTTCCAGGCTACACAAGATTCTTTACGAAACAATAGGCATATCTACCCATGACAGTTACGAAATTAGCGGGGATTCTATTTTCCTTGACATTATGTGACAGACACCAAATCTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAACTGTAGTTTACCTTTAGATTTTTCTGTCCTTCAGTTTTTGCCGTA                                                                                                                                                                    ]
[+] EMBL CD088905             [TGTGGTGTAGTAGGTTTCTTCACGTTCGATAATAGAACGTCATGCGTTGTGATTGCGTTTATAGAACCATTATTAATATCTTCATACGTGAAACAGAAATATTTACCATTTGGCAAAATCATTTATATCACCAATCGGTCTGCTGAAAAGTTGAATATTAAGTTGTTTTCCCCCAAATTCCATTTAAAACCCCGGGTCTTAGACTGTAGACTAAAATATCTTGTCTGATTTGTA GCGCAAAGTACTTTACCATACTGTGCTCTTTTACGTTTTCCGAATGATCTGCTAATAATCTTTATAGTTTTTCAAATGGAAGTAGGATTACTTTTCCAGGCTACACAAGATTCTTTACGAAACAATAGGCATATCTACCCATGACAGTTACGAAATTAGCGGGGATTCTATTTTCCTTGACATTATGTGACAGACACCAAATCTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATTATTATTCCTAATT                                                                                                                                                                                                                      ]
[+] EMBL CD088887             [                                                                                                                GCAAAATCATTTATATCACCAATCGGTCTGCTGAAAAGTTGAATATTAAGTTGTTTTCCCCCAAATTCCATTTAAAACCCCGGGTCTTAGGCTGTAGACTAAAATATCTTGTCTGATTTGTACCCGCAAAGTACTTTACCATACTGTGCTCTTTTACGTTTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_8939#1 TGTGGTGTAGTAGGTTTCTTCACGTTCGATAATAGAACGTCATGCGTTGTGATTGCGTTT ATAGAACCATTATTAATATCTTCATACGTGAAACAGAAATATTTACCATTTGGCAAAATC ATTTATATCACCAATCGGTCTGCTGAAAAGTTGAATATTAAGTTGTTTTCCCCCAAATTC CATTTAAAACCCCGGGTCTTAGGCTGTAGACTAAAATATCTTGTCTGATTTGTAGCGCAA AGTACTTTACCATACTGTGCTCTTTTACGTTTTCCGAATGATCTGCTAATAATCTTTATA GTTTTTCAAATGGAAGTAGGATTACTTTTCCAGGCTACACAAGATTCTTTACGAAACAAT AGGCATATCTACCCATGACAGTTACGAAATTAGCGGGGATTCTATTTTCCTTGACATTAT GTGACAGACACCAAATCTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTA AAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAAC TGTAGTTTACCTTTAGATTTTTCTGTCCTTCAGTTTTTGCCGTAATGCGTAGTCACTTCA CTGAACAGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAAC CGAGTTAAGCCAAACCTTGTAGATTTGTGTACGTTTTTCCAGTTGCCTTTCGTATTGTTA AATTAGACCATATCAGGAGGCCAGTATG



consensusID : consensus_8939#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 696
fasta sequence
                              [GTGACAGACACCAAATCTTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAACTGTAGTTTACCTTTAGATTNTTCTGTCCTTCAGTTTTTGCCGTAATGCGTAGTCACTTCACTGAACAAGAAGCACTTCTGTAGTGACGAGCACAACGATTATTATTAATTATGGATGAAACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTGAATCCGTAACGGTTGAGAAGGATTTGAAGCCTAATGGTGTTTATCAACCACCACACTTGACTCCAGTCTTCTTTGAGGAAGGCAAGAAAAAACCGTCAATGGAAAGGGCCAAGCTGAGAGCGGCTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAAATGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTGAAAATAACAAAACAAGAGAAGCGAATTGAACGCTCTTTACTCCCACGTGGTTTATCCGATACTTCCTCAAGACTGAAACAAATGCAAATACTTTTACAAAGTTCGGATGAAGAATTGGAATATAAACTG]

[-] EMBL CD149084             [GTGACAGACACCAAATCTTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAACTGTAGTTTACCTTTAGATTNTTCTGTCCTTCAGTTTTTGCCGTAATGCGTAGTCACTTCACTGAACAAGAAGCACTTCTGTAGTGACGAGCACAACGATTATTATTAATTATGGATGAAACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTGAATCCGTAACGGTTGAGAAGGATTTGAAGCCTAATGGTGTTTATCAACCACCACACTTGACTCCAGTCTTCTTTGAGGAAGGCAAGAAAAAACCGTCAATGGAAAGGGCCAAGCTGAGAGCGGCTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAAATGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTGAAAATAACA                                                                                                                        ]
[-] EMBL BG932603             [                                                                                                                                                                                                                                                                                                                                                                                         AGGCAAGAAAAAACCGTCAATAGAAAGGGCCAAGCTGAGAGCGGCTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAAATGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTGAAAATAACAAAACAAGAGAAGCGAATTGAACGCTCTTTACTCCCACGTGGTTTATCCGATACTTCCTCAAGACTGAAACAAATGCAAATACTTTTACAAAGTTCGGATGAAGAATTGGAATATAAACTG]


>consensus_8939#2 GTGACAGACACCAAATCTTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATT AAAATCTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAA CTGTAGTTTACCTTTAGATTNTTCTGTCCTTCAGTTTTTGCCGTAATGCGTAGTCACTTC ACTGAACAAGAAGCACTTCTGTAGTGACGAGCACAACGATTATTATTAATTATGGATGAA ACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTGAA TCCGTAACGGTTGAGAAGGATTTGAAGCCTAATGGTGTTTATCAACCACCACACTTGACT CCAGTCTTCTTTGAGGAAGGCAAGAAAAAACCGTCAATGGAAAGGGCCAAGCTGAGAGCG GCTCGGTTTATTTTAGAAGATACTGATTTAAATGAATCAGAAGATTTGCCTAAAGAAGTT TATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAAATGAAAGAAAAACAGAAT TATGAGGAAGAAAACTTCACCCGTCTGAAAATAACAAAACAAGAGAAGCGAATTGAACGC TCTTTACTCCCACGTGGTTTATCCGATACTTCCTCAAGACTGAAACAAATGCAAATACTT TTACAAAGTTCGGATGAAGAATTGGAATATAAACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8939#0      TTTAGTCTTTTCAACTTTTCAACTACAGTGAATTGAATCGTTCGAATAACCCTCAGAATC 60
consensus_8939#2      ------------------------------------------------------------
consensus_8939#1      -----------------------TGTGGTGTAGTAGGTTTCT----TCACGTTCGATAAT 33
                                                                                  

consensus_8939#0      AGTGCACCAAAGTGTGTAGTGG--TTGATAAACCCTCCGTATCTGTCTCATCAATAAAGC 118
consensus_8939#2      ------------------------GTGACAGACA--CCAAATCT-TCCCCGCAGTAACGC 33
consensus_8939#1      AGAACGTCATGCGTTGTGATTGCGTTTATAGAACCATTATTAATATCTTCATACGTGAAA 93
                                               * * * *           * **     *       

consensus_8939#0      TCGAACTGTTGGATATCCAACATTTATATATCAAGTCTACTCCTTACNAGCAGTCAACCT 178
consensus_8939#2      GTTGATAATAAACTTTCCAAGATTATTA----AAATCTA-TGATTACG-GTAG-CGCCAG 86
consensus_8939#1      CAGAAATATTTACCATTTGGCAAAATCAT-TTATATCACCAATCGGTCTGCTG--AAAAG 150
                          *   *      *     *     *    *  **            *  *       

consensus_8939#0      CTGAAGTTTGTTACCGGCTGAGTTCGTCCAAACAACTTCGCTGGAGTCCTTTGGGAGAAA 238
consensus_8939#2      TTGGAGTTT-----TGAAATAATTATTCCTAATT-CATAACTGTAGTTT----------A 130
consensus_8939#1      TTGAATATTA-----AGTTGTTTTCCCCCAAATTCCAT--TTAAAACCCC--------GG 195
                       ** *  **             **   ** **   * *   *  *               

consensus_8939#0      ACTTGACGTTTTTGAGGACTCGGCGATATTTCATTTTTTTGCCGTAATGCGTAGTCACTT 298
consensus_8939#2      CCTTTAGATTNTT----------CTGTCCTTCAGTTTTT-GCCGTAATGCGTAGTCACTT 179
consensus_8939#1      GTCTTAGGCTGTAGA-----CTAAAATATCTTGTCTGAT--TTGTAGCGCAAAGT-ACTT 247
                         * *   * *              *   *    *  *    ***  **  *** ****

consensus_8939#0      CACTGAACAAGAAGCACTTCTGTAGTGACAAGCA-CAACGATTATTATTAATTATGGATG 357
consensus_8939#2      CACTGAACAAGAAGCACTTCTGTAGTGACGAGCA-CAACGATTATTATTAATTATGGATG 238
consensus_8939#1      TACCATACTGTGCTCTTTTACGTTTTCCGAATGATCTGCTAATAATCTTTATAGTTTTTC 307
                       **   **      *  **  **  *    *  * *  * * ** * ** **  *   * 

consensus_8939#0      AAACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTG 417
consensus_8939#2      AAACCGAGTTAAAGCCAAACCTTGGTAGATTTGTGAACATAATCAGTAGGCCAGTATGTG 298
consensus_8939#1      AAATGGAAGTAGGATT--ACTTTTCCAGGCTACACAAGATTCTTTACGAAACAATAGGCA 365
                      ***  **  **       ** **   **  *    ** **  *        ** ** *  

consensus_8939#0      AATC----CGTAACGGTTGAGAAGG-ATTTGAAGCCTAATGGTGTTTATCAACCACCACA 472
consensus_8939#2      AATC----CGTAACGGTTGAGAAGG-ATTTGAAGCCTAATGGTGTTTATCAACCACCACA 353
consensus_8939#1      TATCTACCCATGACAGTTACGAAATTAGCGGGGATTCTATTTTCCTTGACA-TTATGTGA 424
                       ***    * * ** ***  ***   *   *       **  *  **  **   *    *

consensus_8939#0      CTTGACTCCAGTCTTCTTTGAGGAAGGCA---AGAAAAAACCGTCAA----TAGAAAGGG 525
consensus_8939#2      CTTGACTCCAGTCTTCTTTGAGGAAGGCA---AGAAAAAACCGTCAA----TGGAAAGGG 406
consensus_8939#1      CAGACACCAAATCTCCCCGCAGTAACGCGTTGATAATAAACTTTCCAAGATTATTAAAAT 484
                      *      * * *** *    ** ** **    * ** ****  ** *    *   **   

consensus_8939#0      CCAAGCTGAGAGCGGCTCGGTTT--ATTTTAGAAGATACTGATTTAAATGAATCAGAAGA 583
consensus_8939#2      CCAAGCTGAGAGCGGCTCGGTTT--ATTTTAGAAGATACTGATTTAAATGAATCAGAAGA 464
consensus_8939#1      CTATGATTACGGTAGCGCCAGTTGGAGTTTTGAAATAATTATTCCTAATTCATAACTGTA 544
                      * * * * *  *  ** *   **  * *** ***   * *  *   ***  ** *    *

consensus_8939#0      -TTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAA- 641
consensus_8939#2      -TTTGCCTAAAGAAGTTTATTTTGGATGTGGTTCCGAAGAAAGTTTTGCACGAAGAAAAA 523
consensus_8939#1      GTTTACCTTTAGATTTTTCTGTCCT-TCAGTTTTTGCCGTAA--TGCGTAGTCACTTCAC 601
                       *** ***  ***  *** * *    *  * **  *  * **  *  * *   *    * 

consensus_8939#0      TGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTNGAAATACANNAACA-G 700
consensus_8939#2      TGAAAGAAAAACAGAATTATGAGGAAGAAAACTTCACCCGTCTGAAAATAACAAAACAAG 583
consensus_8939#1      TGAAC-AGAAGCACTTCTGTAGTGACAAGCACAACGATTATTATTAATTATGGATGAAAC 660
                      ****  * ** **    * *   **  *  **  *     *    ** **       *  

consensus_8939#0      AGAAGCGAATTGAACGCTCTNTACTCCNACGTGGGTTATCCGATACTTNCTCANNNGACT 760
consensus_8939#2      AGAAGCGAATTGAACGCTCTTTACTCCCACGTGGTTTATCCGATACTTCCTCAAGACTGA 643
consensus_8939#1      CGAGTTAAGCCAAACCTTGTAGATTTGTGTACGTTTT-TCCAGTTGCCTTTCGTATTGTT 719
                       **    *    ***  * *  * *       *  ** ***  *      **        

consensus_8939#0      GAACAATGCAANTACTNNTTACAAGNNTCGATGAAGAATTGGNAATATAACCNGCCNNCA 820
consensus_8939#2      AACAAATGCAAATACTTTTACAAAGTTCGGATGAAGAATTGGAA-TATAAACTG------ 696
consensus_8939#1      AAATTAGACCATATCAGGAGGCCAGTATG------------------------------- 748
                       *   *  * *   *        **                                   

consensus_8939#0      CAANNGNGANGNNTNGNNTGTATACTAATGGATGAATTTANAAAAAGAGAACAGCTGAAG 880
consensus_8939#2      ------------------------------------------------------------
consensus_8939#1      ------------------------------------------------------------
                                                                                  

consensus_8939#0      CGTTAAGACGCAAAAAGGGCGTCAAAAGAACTANTNNGGNTTTGGGNTACAATGTTTCAA 940
consensus_8939#2      ------------------------------------------------------------
consensus_8939#1      ------------------------------------------------------------
                                                                                  

consensus_8939#0      TCCAG 945
consensus_8939#2      -----
consensus_8939#1      -----
                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)