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Schistosoma mansoni
cluster # 9040 cluster # 9040       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9040#0 length = 976 sequences # 4  
consensus_9040#1 length = 508 sequences # 1  
consensus_9040#2 length = 419 sequences # 1  
consensus_9040#3 length = 312 sequences # 1  
consensus_9040#4 length = 141 sequences # 1  

consensusID : consensus_9040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 976
fasta sequence
                              [CCAATCGAATCTCCCTGATCATCCCAACTTGCTTCCCTGTATCGCGAGTGGCCTACAACATGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAAGCGAGGTACATTGCAACGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTTGTACCTCATAAAGACCATGATGATTGGTATTTGCGATGGCCTTATTGCTCTTCTTTCTCTTGATATTCCAATGTCTCATCGAGATATAAAGCCTGGGAATGTTCTTTTGTTTGAAGAAATGAGACCAGTTTTAATGGATTTTGG--CTGTTACTCCATCCATTCTTCCTATTGAGAACATTAGAGACGCAGAAAAATGGAAGGAGTTTGCTGAGGAAAACTGTTCACTAACTTATCGGGCTCCAGAGTTGTTTAATCCAATAACTCACGAAAACATAACCGAGAAAGCTGATGTTTGGTCCCTAGGATGTTTGTTGTATGCTTTGATTTTCTTCAAATCCCCAATGGATTTC-GTTCATGCTCGGGGTGACAGCGTTGCTCTTGC-TGCTTGTTCAGCTAATATACATTTCCCAATAGACTCGTGTTCAAATGTTCCACCAGAA-TGGATAAAGTTAAT-GGAAGCAATGCTGTCCGCTAATCCTCAAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATCATGTATTGTAATAATCAAAGTGCAATAACTTATT-CGTTGTAATTTCGACTCAGCTTGACTAAATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTTTTATACTATTTACAAAATACTGAGAAGTCTTTCTAAACTTTTTACCTTCACTTTTATTCTCTGTACTTTTTAATATTCCACATAATATTGCATAGAATTGCAGGACGGTTTTGGTTTTTCGTTCGAAAATGAAATATAACTAAATAT]

[+] EMBL CD078815             [CCAATCGAATCTCCCTGATCATCCCAACTTGCTTCCCTGTATCGCGAGTGGCCTACAACATGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAAGCGAGGTACATTGCAACGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTTGTACCTCATAAAGACCATGATGATTGGTATTTGCGATGGCCTTATTGCTCTTCTTTCTCTTGATATTCCAATGTCTCATCGAGATATAAAGCCTGGGAATGTTCTTTTGTTTGAAGAAATGAGACCAGTTTTAATGGATTTTGG  CTGTTACTCCATCCATTCTTCCTATTGAGAACATTAGAGACGCAGAAAAATGGAAGGAGTTTGCTGAGGAAAACTGTTCACTAACTTATCGGGCTCCAGAGTTGTTTAATCCAATAACTCACGAAAACATAACCGAGAAAGCTGATGTTTGGTCCCTAGGATGTTTGTTGTATGCTTTGATTTTCTTCANATCCCCAATGGATTTC GTTCATGCTCGGNGTGACAGCGTTGCTCTTGC TGCTTGTTCAGCTAATATACATTTCCCAATAGACTCGTGTTCANATG                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL SMAA25637            [                                                                                                                                                                                                                                                                                                                  aggaagAATGGATTTTGGCTCTGTTACTCCATCCATTCTTCCTATTGAGAACATTAGAGACGCAGAAAAATGGAAGGAGTTTGCTGAGGAAAACTGTTCACTAACTTATCGGGCTCCAGAGTTGTTTAATCCAATAACTCACGAAAACATAACCGAGAAAGCTGATGTTTGGTCCCTAGGATGTTTGTTGTATGCTTTGATTTTCTTCAAAT CCCGATGGATTTCGGTTCATGCTCGGGGTGACAGCGTTGCTCTTGCTTGCTTGTTCAGCTAATATACATTTCCCAATAGACTCGTGTTCAAATGTTCCACCAGAAGTGGATAAAGTTAATCGGAAGCAATGCTGTCCGCTAATCCTCAAGATCGTCCTTCACTTACTCAAATTGTGGAGT CTTC AAAACGT GCTAGAGAAATCATGGAATGGTATAATCAAAGTGCAATAAC TATTCCGTTGTAA TTCGAATCAGCTg                                                                                                                                                                                                         ]
[-] EMBL CD073276             [                                                                                                                                                                                                                                                                                                                                                                                          GAAGGAGTTTGCTGAGGAAAACTGTTCACTAACTTATCGGGCTCCAGAGTTGTTTAATCCAATAACTCACGAAAACATAACCGAGAAAGCTGATGTTTGGTCCCTAGGATGTTTGTTGTATGCTTTGATTTTCTTCAAATCCCCAATGGATTTC GTTCATGCTCGGGGTGACAGCGTTGCTCTTGC TGCTTGTTCAGCTAATATACATTTCCCAATAGACTCGTGTTCAAATGTTCCACCAGAA TTGATAAAGTTAAT GGAAGCAATGCTGTCCGCTAATCCTCAAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATCATGTATTGTAATAATCAAAGTGCAATAACTTATT CGTTGTAATTTCGACTCAGCTTGACTAAATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTTTTATACTATTTACAAAATACTGAGAAGTCTTTCTAAACTTTTTACCTTCACTTTTATTCTCTGTACTTTTTAATATTCCACATAATATTGCATAGAATTGCAGGACGGTTTTGGTTTTTCGTTCGAAAATGAAATATAACTAA    ]
[-] EMBL AA999345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTCCTTCAAAAACGTTCCTGAAGAAATCATGTATTGTAATAATCAAAGTGCAATAACTTATT CGTTGTAATTTCGACTCAGCTTGACTTAATCCCATTTGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTTTTATACTATTTACAAAATACTGAGAAGTCTTTCTAAACTTTTTACCTTCACTTTTATTCTCTGTACTTTTTAATATTCCACATAATATTGCATAGAATTGCAGGACGGTTTTGGTTTTTCGTTCGAAAATGAAATATAACTAAATAT]


>consensus_9040#0 CCAATCGAATCTCCCTGATCATCCCAACTTGCTTCCCTGTATCGCGAGTGGCCTACAACA TGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAA GCGAGGTACATTGCAACGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTT GTACCTCATAAAGACCATGATGATTGGTATTTGCGATGGCCTTATTGCTCTTCTTTCTCT TGATATTCCAATGTCTCATCGAGATATAAAGCCTGGGAATGTTCTTTTGTTTGAAGAAAT GAGACCAGTTTTAATGGATTTTGGCTGTTACTCCATCCATTCTTCCTATTGAGAACATTA GAGACGCAGAAAAATGGAAGGAGTTTGCTGAGGAAAACTGTTCACTAACTTATCGGGCTC CAGAGTTGTTTAATCCAATAACTCACGAAAACATAACCGAGAAAGCTGATGTTTGGTCCC TAGGATGTTTGTTGTATGCTTTGATTTTCTTCAAATCCCCAATGGATTTCGTTCATGCTC GGGGTGACAGCGTTGCTCTTGCTGCTTGTTCAGCTAATATACATTTCCCAATAGACTCGT GTTCAAATGTTCCACCAGAATGGATAAAGTTAATGGAAGCAATGCTGTCCGCTAATCCTC AAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATCA TGTATTGTAATAATCAAAGTGCAATAACTTATTCGTTGTAATTTCGACTCAGCTTGACTA AATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTTTTATACTATTT ACAAAATACTGAGAAGTCTTTCTAAACTTTTTACCTTCACTTTTATTCTCTGTACTTTTT AATATTCCACATAATATTGCATAGAATTGCAGGACGGTTTTGGTTTTTCGTTCGAAAATG AAATATAACTAAATAT



consensusID : consensus_9040#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 508
fasta sequence
                              [AAATTGAATGTATGGTTCTGAGAAGATTTTGTCTTGTGGNTTGTACAGACCCATGTAGTGAAGCTGTTCGAGTAAAGGATGCATCAGGACATTGGAAAACGTTTTACGTGCGCTATAAGTTAGATACCGGGTATGTTTATAAGGTTTTCTAATAATGGAAGTTTTTAGGGGATTTAGCCGAATAGATCTTATTTTTGACAAAGGGTCTAAAAGATCATTCGCTTTAATACGTATCCTATGTCATTCAAAGGATGATGAAAGTAAGGCTTTAAAGGAAGCTAATTTCCAATCGAATCTCCCTGATCATCCCGACTTGCTTCCCTGTATCGCGAGTGGCCTACAACATGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAAGGTATGTCTTAATATATGTCAGATGAAATATTACAGCGAGGTACACTGCACGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTTGTACCTCAT]

[-] EMBL CD064448             [AAATTGAATGTATGGTTCTGAGAAGATTTTGTCTTGTGGNTTGTACAGACCCATGTAGTGAAGCTGTTCGAGTAAAGGATGCATCAGGACATTGGAAAACGTTTTACGTGCGCTATAAGTTAGATACCGGGTATGTTTATAAGGTTTTCTAATAATGGAAGTTTTTAGGGGATTTAGCCGAATAGATCTTATTTTTGACAAAGGGTCTAAAAGATCATTCGCTTTAATACGTATCCTATGTCATTCAAAGGATGATGAAAGTAAGGCTTTAAAGGAAGCTAATTTCCAATCGAATCTCCCTGATCATCCCGACTTGCTTCCCTGTATCGCGAGTGGCCTACAACATGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAAGGTATGTCTTAATATATGTCAGATGAAATATTACAGCGAGGTACACTGCACGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTTGTACCTCAT]


>consensus_9040#1 AAATTGAATGTATGGTTCTGAGAAGATTTTGTCTTGTGGNTTGTACAGACCCATGTAGTG AAGCTGTTCGAGTAAAGGATGCATCAGGACATTGGAAAACGTTTTACGTGCGCTATAAGT TAGATACCGGGTATGTTTATAAGGTTTTCTAATAATGGAAGTTTTTAGGGGATTTAGCCG AATAGATCTTATTTTTGACAAAGGGTCTAAAAGATCATTCGCTTTAATACGTATCCTATG TCATTCAAAGGATGATGAAAGTAAGGCTTTAAAGGAAGCTAATTTCCAATCGAATCTCCC TGATCATCCCGACTTGCTTCCCTGTATCGCGAGTGGCCTACAACATGTCTCTAGACGTGA ACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAAGGTATGTCTTAATAT ATGTCAGATGAAATATTACAGCGAGGTACACTGCACGTGAAATTGACCATAGATCTGCAC GTAATGATATGTTCCCCTTGTACCTCAT



consensusID : consensus_9040#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 419
fasta sequence
                              [GTGTAGCATTCCATAAAACANNTTTTTCCTCTCCTTCATTTAATTTTTCAGTGTTCCACCAGAATTGATAAAGTTAATGGAAGCAATGCTGTCCGCTAATCCTCAAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATCATGTATTGTAATAATCAAAGTGCAATAACTTATTCGTNGTAATTTCGACTCAGCTTGACTAAATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTCTTATACTATTTACAAAATACTGAGAAGTCTTTCTAAACNNTTTACCTTCACTNTTATTCTCTGTACNTNATAATATTCCACATAATATTGCATAGAATTGCAGGACGGTTTTGGTTTNTCGTTCGAAAATGAAATATAACTAAATA]

[-] EMBL SMAA18466            [GTGTAGCATTCCATAAAACANNTTTTTCCTCTCCTTCATTTAATTTTTCAGTGTTCCACCAGAATTGATAAAGTTAATGGAAGCAATGCTGTCCGCTAATCCTCAAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATCATGTATTGTAATAATCAAAGTGCAATAACTTATTCGTNGTAATTTCGACTCAGCTTGACTAAATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTCTTATACTATTTACAAAATACTGAGAAGTCTTTCTAAACNNTTTACCTTCACTNTTATTCTCTGTACNTNATAATATTCCACATAATATTGCATAGAATTGCAGGACGGTTTTGGTTTNTCGTTCGAAAATGAAATATAACTAAATA]


>consensus_9040#2 GTGTAGCATTCCATAAAACANNTTTTTCCTCTCCTTCATTTAATTTTTCAGTGTTCCACC AGAATTGATAAAGTTAATGGAAGCAATGCTGTCCGCTAATCCTCAAGATCGTCCTTCACT TACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATCATGTATTGTAATAATCA AAGTGCAATAACTTATTCGTNGTAATTTCGACTCAGCTTGACTAAATCCCACATGAAATC TATCCGTAAAACATTTACTCTTTTACTCTTCTCTTATACTATTTACAAAATACTGAGAAG TCTTTCTAAACNNTTTACCTTCACTNTTATTCTCTGTACNTNATAATATTCCACATAATA TTGCATAGAATTGCAGGACGGTTTTGGTTTNTCGTTCGAAAATGAAATATAACTAAATA



consensusID : consensus_9040#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 312
fasta sequence
                              [GAAGCAAGTTGGGATGATCAGGGAGATTCGATTGGAAATTAGCTTCCTTTAAAGCCTTACTTTCATCATCCTTTGAATGACATAGGATACGTTTTAAAGCGAATGATCTTTTATACCCTTTGTCAAAAATAAGATCTATTCGGCTAAATCCACTAAAAACCGGTATCTAACTTATAGCGCACGTAAAACGTTTTCCAATGTCCTGATGCATCCTTTACTCGAACAGCTTCACTACATGGGTCTGTACAACCCACAAGACAAAATCTTCTCAGAACCATACATTCAATTTGAATTCGTCAACGTTAAAGATTC]

[+] EMBL CD157897             [GAAGCAAGTTGGGATGATCAGGGAGATTCGATTGGAAATTAGCTTCCTTTAAAGCCTTACTTTCATCATCCTTTGAATGACATAGGATACGTTTTAAAGCGAATGATCTTTTATACCCTTTGTCAAAAATAAGATCTATTCGGCTAAATCCACTAAAAACCGGTATCTAACTTATAGCGCACGTAAAACGTTTTCCAATGTCCTGATGCATCCTTTACTCGAACAGCTTCACTACATGGGTCTGTACAACCCACAAGACAAAATCTTCTCAGAACCATACATTCAATTTGAATTCGTCAACGTTAAAGATTC]


>consensus_9040#3 GAAGCAAGTTGGGATGATCAGGGAGATTCGATTGGAAATTAGCTTCCTTTAAAGCCTTAC TTTCATCATCCTTTGAATGACATAGGATACGTTTTAAAGCGAATGATCTTTTATACCCTT TGTCAAAAATAAGATCTATTCGGCTAAATCCACTAAAAACCGGTATCTAACTTATAGCGC ACGTAAAACGTTTTCCAATGTCCTGATGCATCCTTTACTCGAACAGCTTCACTACATGGG TCTGTACAACCCACAAGACAAAATCTTCTCAGAACCATACATTCAATTTGAATTCGTCAA CGTTAAAGATTC



consensusID : consensus_9040#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 141
fasta sequence
                              [AGAGTATTTACAAAACAATGACAAGTCTTTATAAACTTTTTACCTTCACTTTTATTCTCTGTACTTTTTAATATCCCACATAATATTGCATAGAATTGCAGGACGGTATTGGCTCTTCGTTCGAAAATGGAATATACCTTG]

[-] EMBL CD073275             [AGAGTATTTACAAAACAATGACAAGTCTTTATAAACTTTTTACCTTCACTTTTATTCTCTGTACTTTTTAATATCCCACATAATATTGCATAGAATTGCAGGACGGTATTGGCTCTTCGTTCGAAAATGGAATATACCTTG]


>consensus_9040#4 AGAGTATTTACAAAACAATGACAAGTCTTTATAAACTTTTTACCTTCACTTTTATTCTCT GTACTTTTTAATATCCCACATAATATTGCATAGAATTGCAGGACGGTATTGGCTCTTCGT TCGAAAATGGAATATACCTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      CCAATCGAATCTCCCTGATCATCCCAACTTGCTTCCCTGTATCGCGAGTGGCCTACAACA 60
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      TGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTATCTTATAGCAA 120
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      GCGAGGTACATTGCAACGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTT 180
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      GTACCTCATAAAGACCATGATGATTGGTATTTGCGATGGCCTTATTGCTCTTCTTTCTCT 240
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      TGATATTCCAATGTCTCATCGAGATATAAAGCCTGGGAATGTTCTTTTGTTTGAAGAAAT 300
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      GAGACCAGTTTTAATGGATTTTGGCTGTTACTCCATCCATTCTTCCTATTGAGAACATTA 360
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      GAGACGCAGAAAAATGGAAGGAGTTTGCTGAGGAAAACTGTTCACTAACTTATCGGGCTC 420
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      CAGAGTTGTTTAATCCAATAACTCACGAAAACATAACCGAGAAAGCTGATGTTTGGTCCC 480
consensus_9040#1      ------------------------------------------------------------
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ------------------------------------------------------------
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      TAGGATGTTTGTTGTATGCTTTGATTTTCTTCAAATCCCCAATGGATTTCGTTCATGCTC 540
consensus_9040#1      ---------------------AAATTGAATGTATGGTTCTGAGAAGATTTTGTCTTGTGG 39
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      ----------------GTGTAGCATTCCATAAAACANN-TTTTTCCTCTCCTTCATTTAA 43
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      GGGGTGACAGCGTTGCTCTTGCTGCTTGTTCAGCTAAT-ATACATTTCCCAATAGACTCG 599
consensus_9040#1      NTTGTACAGACCCATGTAGTGAAGCTGTTCGAGTAAAGGATGCATCAGGACATTGGAAAA 99
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      TTTTTCAGTGTTCCACCAGAATTGATAAAGTTAATGGAAGCAATGCTGTCCGCTAATCCT 103
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      TGTTCAAATGTTCCACCAGAATGGATAAAGTTAATGGAAGCAATGCTGTCCGCTAATCCT 659
consensus_9040#1      CGTTTTACGTGCGCTATAAGTTAGATACCGGGTATGTTTATAAGGTTTTCTAATAATG-- 157
consensus_9040#3      ------------------------------------------------------------
                                                                                  

consensus_9040#2      CAAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATC 163
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      CAAGATCGTCCTTCACTTACTCAAATTGTGGAGTCCTTCAAAAACGTACCTGAAGAAATC 719
consensus_9040#1      GAAGTTTTTAGGGGATTTAGCCGAATAGATCTTATTTTTGACAAAGGGTCT-AAAAGATC 216
consensus_9040#3      -----------------GAAGCAAGTTGGGATGATCAGGGAGATTCGATT--GGAAATTA 41
                                                                                  

consensus_9040#2      ATGTATTGTAATA---ATCAAAGTGCAATAACTTATTCGTNGTAATTTCGACTCAGCTTG 220
consensus_9040#4      ------------------------------------------------------------
consensus_9040#0      ATGTATTGTAATA---ATCAAAGTGCAATAACTTATTCGTTGTAATTTCGACTCAGCTTG 776
consensus_9040#1      ATTCGCTTTAATACGTATCCTATGTCATTCAAAGGATGATGAAAGTAAGGCTTTAAAGGA 276
consensus_9040#3      GCTTCCTTTAAAGCCTTACTTTCATCATCCTTTGAATGACATAGGATACGTTTTAAAGCG 101
                                                                                  

consensus_9040#2      ACTAAATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTCTTATACT 280
consensus_9040#4      -------------------------------------------------------AGAGT 5
consensus_9040#0      ACTAAATCCCACATGAAATCTATCCGTAAAACATTTACTCTTTTACTCTTCTTTTATACT 836
consensus_9040#1      AGCTAATTTCCAATCGAATCTCCCTG-ATCATCCCGACTTGCTTCCCTGTATCGCGAGTG 335
consensus_9040#3      AATGATCTTTTATACCCTTTGTCAAAAATAAGATCTATTCGGCTAAATCCACTAAAAACC 161
                                                                                  

consensus_9040#2      ATTTACAAAAT-------------ACTGAGAAGTCTTTCTAAA---CNNTTTACCTTCAC 324
consensus_9040#4      ATTTACAAAAC-------------AATGACAAGTCTTTATAAA---CTTTTTACCTTCAC 49
consensus_9040#0      ATTTACAAAAT-------------ACTGAGAAGTCTTTCTAAA---CTTTTTACCTTCAC 880
consensus_9040#1      GCCTACAACATGTCTCTAGACGTGAACAAGGAGCTATTTCAGAAGTTCTTTTGGTGTTAT 395
consensus_9040#3      GGTATCTAACTTATA------GCGCACGTAAAACGTTTTCCAA---TGTCCTGATGCATC 212
                           * *                       *    **    *        *        

consensus_9040#2      TNTTATTCTCTGTACNTNATAATATTC--CACAT--AATATTGCATAGAATTGCAGGAC- 379
consensus_9040#4      TTTTATTCTCTGTACTTTTTAATATCC--CACAT--AATATTGCATAGAATTGCAGGAC- 104
consensus_9040#0      TTTTATTCTCTGTACTTTTTAATATTC--CACAT--AATATTGCATAGAATTGCAGGAC- 935
consensus_9040#1      CTTATAGCAAGGTATGTCTTAATATATGTCAGATGAAATATTACAGCGAGGTACACTGCA 455
consensus_9040#3      CTTTACTCGAACAGCTTCACTACATGGG-TCTGT---ACAACCCACAAGACAAAATCTTC 268
                        *    *        *    * **        *   * *   **         *     

consensus_9040#2      ---GGTTTTGGTTTNTCGTTCGAAAATGA-AATATAACTAAATA--------- 419
consensus_9040#4      ---GGTATTGGCTCTTCGTTCGAAAATGG-AATATACCTTG------------ 141
consensus_9040#0      ---GGTTTTGGTTTTTCGTTCGAAAATGA-AATATAACTAAATAT-------- 976
consensus_9040#1      CGTGAAATTGACCATAGATCTGCACGTAATGATATGTTCCCCTTGTACCTCAT 508
consensus_9040#3      TCAGAACCATACATTCAATTTGAATTCGTCAACGTTAAAGATTC--------- 312
                         *              *  * *       *  *                  




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)