These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9055#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 757 fasta sequence [AGTTCTGACATAACA-GACAAATGCTGTACATTTGCAGGTAGTGTTGCACTTTTATTTACACAGGAATCATTAAATCGTTTGTTCGGTGTTAAACTATTGGATGCCGTGATGTCTACTGAGATCGAGGCTGAACCGTTATGGATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA-CCATTTTGTGGTGGTTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTTTTGGCGACTGGCACGAACATGATCAACAATTTTGGACACTTGTTCAGCAC-CC-GCT-GCTTCAGC--TGCAGCTAAATCTTCAACTCCACTGAACTCATTAGTGGAAAAGTCCGTTGTCAGTAAATCAG-CCCTGTTATTTGGTCACCATATGTACATGCCAGCCACGATGAACTAGGATGCGTGCGTCTCAGTAAATTAGGCTGACGATAGATATGACCAGTTCTGAAACCTGCGCTATCCAGAACACGCATTTCAGCCTCAAATTCTAATTCTGCTGGCGTCCACGAAATATCACCATTATCACTGCAATCTTTACCATTCAATGATGTATGATCATTTTTATCTTGATCTACGAC] [+] EMBL CD060200 [AGTTCTGACATAACA GACAAATGCTGTACATTTGCAGGTAGTGTTGCACTTTTATTTACACAGGAATCATTAAATCGTTTGTTCGGTGTTAAACTATTGGATGCCGTGATGTCTACTGAGATCGAGGCTGAACCGTTATGGATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA CCATTTNGTGGTGGTTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTTTCGGCGACTGGCACGAACATGATCAACAATTTTGGACACTTGTTCAGCAC CC GCT GCTTCAGC TGCAGCTAAATCTT ] [+] EMBL CD060251 [ TGACATAACATGACAAATGCTGTACATTTGCAGGTAGTGTTGCACTTTTATTTACACAGGAATCATTAAATCGTTTGTTCGGTGTAAAACTATTGGATGGCGTGATGTCTACTGAGATCGAGGCTGAACCGTTATGGATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAACTGGCTGAGAACGACAGTCACCTGAAACTTTATTTCCGGACAATTTCCGGGGTGCATCGATCATAGAGCTGGTTACCATACCCATTTTGTGGTGGTTCATTAGCTATTGCTAAACACTGATTTCGTTGTGCATATATTTGGCGACTGGAACGAACATGATCAACAATTTTGGACACTTGTTCAG AC CC GCT GCATCAGT TG AGCTAAATCT ] [-] EMBL CD060248 [ CAGGAATCATTAAATCGTTTGTTCGGTGTTAAACTATTGGATGCCGTGATGTCTACTGAGATCGAGGCTGAACCGTTATGGATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA CCATTTTGTGGTGGCTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTGTTGGCGACTGGCACGAACATGATCAACAATTTTGGACACTTGTTCAGCACTCCAGCTCGCTTCAGCCATGCAGGTAAATCTTC ] [-] EMBL CD113486 [ ATCGTTTGTTCGGTGTTAAACTATTGGATGCCGTGATGTCTACTGAGATCGAGGCTGAACCGTTATGGATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA CCATTTTGTGGTGGTTCATTAGCTTTTGCTAACCA ] [+] EMBL CD197698 [ TGTTCGGTGTTAAACTATTGGATGCCGTGATGTCTACTGAGATCGAGGCTGAACCGTTATGGATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA CCATTTTGTGGTGGTTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTTTTGGCGACTGGCACGAACATGATCCACAATTTTGGACACTTGTTCAGCAC CC CCT G ] [-] EMBL CD064611 [ ATTGAATAGTCAGAAACATCATGTGGACTTCGCATAACAGGAGAATGAAAATCCTTTCCTACACGAGATGATGCGCTTCCGGGTTCAGATCGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA CCATTTTGTGGTGGTTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTTTTGGCGACTGGCACGAACATGATCAACAATTTTGGACACTTGTTCAGCAC CC GCT GCTTCAGC TGCAGCTAAATCTTCAACTCCACTGAACTCATTAGTGGAAAAGTCCGTTGTCAGTAAATCAG CCCTGTTATTTGGTCACCATATGTACATGCCA ] [+] EMBL CD061771 [ gcaaCTT CGGGATCAGA CGTCTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCAATCATAGAGCTGGTTACCATA CCATTTTGTGGTGGTTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTTTTGGCGACTGGCACGAACATGATCAACAATTTTGGACACTTGTTCAGCAC CC GCT GCTTCAGC TGCAGCTAAATCTTCAACTCCACTGAACTCATTAGTGGAAAAGTCCGTTGTCAGTAAATCAGCCCCTGTTATTTGGTCACCATATGTATCTCCTGGCCACGATGAACTAGGATGCGTGCGTCTCAGTAAATTAGGCTGACGATAGATATGACCAGTTCTGAAACCTGCGCTATCCAGAACACGCATTTCAGCCTCAAATTCTAATTCTGCTGGCGTCCACGAAATATCACCATTATCACTGCAATCTTTACCATTCAATGATGTATGATCATTTTTATCTTGATCTACGAC] [+] EMBL CD061803 [ CTAACAGGTGAACAGACAGGAGAATCCAAAGTAAATGGATGAGAACGACAGTCACCTGAACCTTTAGTTCCGGACAATTTCCGGGGTGAATCGATCATAGAGCTGGTTACCATA CCATTTTGTGGTGGTTCATTAGCTTTTGCTAACCACTGATTTCGTTGTGCATTTTTTTGGCGACTGGCACGAACATGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||