These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 945 fasta sequence [GAACCAAGTGAACCGACTAAACTTATTAAAGTACAAAAACCAATTACTGTTCCAAAGATAACTGTTGATGCACCAAAAGAAATAAATGCTCGCCTAGGTGAACCATTTAAAATTCGAATTCCATTTACCGGTGGACCACCAGAAGAAGTCGAGTTGATAAAAGATGGCAAACCTGTTCCACTAGATACAAATCGTTTCAAACTTGAAGTGACACCAAATGAAGTTATTATCACAGATACAAAAGCGGAAAAAGAAGATGCTGGACAGTATAAAGTTGCTTTGAAAAATGAAAAAGGTGAAGCCAGTCATCCACTCACCGTGAAAGTATTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACTGATATCAAAGGTGATTCGTGCAAATTAACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAG--GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTTGGAACAAGTGAACCTTTAGAAACAAGCCGTTCAATACTAGCTGAAGAACCAAGTACTGTACCAGATGCGCCAAATAATTTGACCGTGGCTGATGTAGATGCTAATAAAATTACACTGGAATGGTCTAAGCCGCGTAATGACGGTGGTAAACGCGTAAATGGTTATGTAGTCGAATAC-AACCTCTCAATGC-ACAGAATGGGAAC-AGCTGCTA-TGTTAAAGA-TTAACTGC-ACGTGTCGATGGGTTGAAAAAGGGTGAAAAATATATGTTCCGTGTTTCTGCTAGAAATGAAGTAGGTGTGAGTCAACCATGCTCAACCAGTCGTGCAGTGGAATGTAAACCGAAACATACTACAGCTGATAGTCCAGG] [+] EMBL CD088927 [GAACCAAGTGAACCGACTAAACTTATTAAAGTACAAAAACCAATTACTGTTCCAAAGATAACTGTTGATGCACCAAAAGAAATAAATGCTCGCCTAGGTGAACCATTTAAAATTCGAATTCCATTTACCGGTGGACCACCAGAAGAAGTCGAGTTGATAAAAGATGGCAAACCTGTTCCACTAGATACAAATCGTTTCAAACTTGAAGTGACACCAAATGAAGTTATTATCACAGATACAAAAGCGGAAAAAGAAGATGCTGGACAGTATAAAGTTGCTTTGAAAAATGAAAAAGGTGAAGCCAGTCATCCACTCACCGTGAAAGTATTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACTGATATCAAAGGTGATTCGTGCAAATTAACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAN GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTTGGAACAAGTGAACCTTTAGAAACAAGCCGTTCAATACTAGCTGAAGAACCAAGTACTGTACCAGATGCGC ] [-] EMBL CD066065 [ AAGTGAACCGACTAAACTTATTAAAGTACAAAAACCAATTACTGTTCCAAAGATAACTGTTGATGCACCAAAAGAAATAAATGCTCGCCTAGGTGAACCATTTAAAATTCGAATTCCATTTACCGGTGGACCACCAGAAGAAGTCGAGTTGATAAAAGATGGCAAACCTGTTCCACTAGATACAAATCGTTTCAAACTTGAAGTGACACCAAATGAAGTTATTATCACAGATACAAAAGCGGAAAAAGAAGATGCTGGACAGTATAAAGTTGCTTTGAAAAATGAAAAAGGTGAAGCCAGTCATCCACTCACCGTGAAAGTATTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACT ] [+] EMBL CD194538 [ AACTTATTAAAGTACAAAAACCAATTACTGTTCCAAAGATAACTGTTGATGCACCAAAAGAAATAAATGCTCGCCTAGGTGAACCATTTAAAATTCGAATTCCATTTACCGGTGGACCACCAGAAGAAGTCGAGTTGATAAAAGATGGCAAACCTGTTCCACTAGATACAAATCGTTTCAAACTTGAAGTGACACCAAATGAAGTTATTATCACAGATACAAAAGCGGAAAAAGAAGATGCTGGACAGTATAAAGTTGCTTTGAAAAATGAAAAAGGTGAAGCCAGTCATCCACTCACCGTGAAAGTATTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACTGATATCAAAGGTGATTCGTGCAAATTAACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAG GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTTGGAACAAGTGAACCTTTAGAAACAAGC ] [+] EMBL CD194459 [ AACTTATTAAAGTACAAAAACCAATTACTGTTCCAAAGATAACTGTTGATGCACCAAAAGAAATAAATGCTCGCCTAGGTGAACCATTTAAAATTCGAATTCCATTTACCGGTGGACCACCAGAAGAAGTCGAGTTGATAAAAGATGGCAAACCTGTTCCACTAGATACAAATCGTTTCAAACTTGAAGTGACACCAAATGAAGTTATTATCACAGATACAAAAGCGGAAAAAGAAGATGCTGGACAGTATAAAGTTGCTTTGAAAAATGAAAAAGGTGAAGCCAGTCATCCACTCACCGTGAAAGTATTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACTGATATCAAAGGTGATTCGTGCAAATTAACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAGNNGC AC ATTATAGGTTNCGTGTACGAGCTGAGAATGAACTTGGAAC AGTGAACCTTTAGAAAac ] [+] EMBL CD094076 [ GAAGCCAGTCATCCACTCACCGTGAAAGTACTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACTGATATCAAAGGTGATTCGTGCAAATTAACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAG GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTTGGAACAAGTGAACCTTTAGAAACAAGCCGTTCA ] [+] EMBL CD094073 [ GAAGCCAGTCATCCACTCACCGTGAAAGTATTAAGTCCACCTGATGCTCCTGAAGGTCCTTTGGAAGTTACTGATATCAAAGGTGATTCGTGCAAATTAACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAG GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTTGGAACAAGTGAACCTTTAGAAACAAGCCGTTCA ] [-] EMBL CD070566 [ TGCAAATTAACATGGAACCCTNCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAG GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTTGGAACAAGTGAACCTTTAGAAACAAGCCGTTCAATACTAGCTGAAGAACCAAGTACTGTACCAGATGCGCCAAATATTTTGACCGTGGCTGATGTAGATGCT ] [-] EMBL CD166211 [ AACATGGAACCCTCCAAAGAACAATGGAGGCAGTCCGATAACAAATTATATTGTTGAAAAACTGGAACCGAGAACTGGAGAATGGTTACCTGTTAGTAAATTTGTCCGAACTCCAGAATATGAAGTCACTGGTTTAGAACCAG GCAACAATTATAGGTTTCGTGTACGAGCTGAGAATGAACTCGGCACAAGTGAACCTTTAGAGACGAGCCGTTCCATAGTACCCGAACAACCTAGTACTGTACCAGATGCGCCATATAATATGACCGTGGCTGATGTAGATGCTAATAAAATTACACTGGAATGGTCTAAGCCGCGTAATGACGGTGGTAAACGCGTAAATGGTTATGTAGTCGAATAC AACCTCTCAATGC ACAGAATGGGAAC AGCTGCTA TGTTAAAGA TTAACTGC ACGT ] [+] EMBL CD135127 [ CCAAATAATTTGACCGTGGCTGATGTAGATGCTAATAAAATTACACTGGAATGGTCTAAGCCGCGTAATGACGGTGGTAAACGCGTAAATGGTTATGTAGTTGAATACAAACCTCTCAATGCAACAGAATGGGAACAAGCTGCTATTGTTAAAGATTTAACTGCAACG GTCGATGGGTTGAAAAAGGGTGAAAAATATATGTTCCGTGTTTCTGCTAGAAATGAAGTAGGTGTGAGTCAACCATGCTCAACCAGTCGTGCAGTGGAATGTAAACCGAAACATACTACAGCTGATAGTCCAGG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||