These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9279#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 507 fasta sequence [TTATTTAACAAAC-TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT-TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAA-GGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGAAAATATGCT-GAATATAAAGATATAAAAAATTTC-TTTGTTTTTACAAGTAAACCA-GGT-GTATTCGTGATATGTAAACATGATTCGGGAGACAAATAAAAAAACATATGAAAGTTATTGTTGTGATGATCCATCTGATTTAGAAAAATTAACACGT] [+] EMBL SMAA8278 [TTATTTAACAAAC TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGGGGAAA ] [+] EMBL SMAA8284 [ TAACAAAC TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAA GGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGAAAATATGCT GAATATAAAGATATAAAAAATTTC TTTGTTTTTACAAGT AACCA GGG GTA TCGTGATATGT AACATGATTCGGa ] [+] EMBL SMAA85797 [ ACAAAC TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAA GGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGAAAATATGCTGGAATATAAAGTTATAAAAAATTTC TTTGTTTTTACAAGTAAACCA GGT GTATTCGTGATATGTAAACATGATTC GGAGACAAATAAAA ] [+] EMBL SMAA85830 [ ACAAAC TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAAGGGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGAAAATATGCT GAATATAAAGATATAAAA ] [+] EMBL SMAA85791 [ ACAAAC TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAA GGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCACCCACAATTATCCCCCATTCAACAAGAAAATATGCG GAATATAA ] [+] EMBL SMAA85757 [ ACAAAC TACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCTATGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAGAAAACATTTGGCTAAA GGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGGAAATATGCT ] [+] EMBL SMAA85834 [ ACAAACTTACTGGTGATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAA GGTCATACAAATA ] [+] EMBL SMAA85769 [ ATTACTGGTGTATCAAAAAGAAATTGATCACTCAACAAATCTTCAAGAAGATTAACTCT TGTAACGTTGTATTGTAATAACAAAGACAAATGAAACGAGGCAAACGGTCAAGTAGTGTGGATTCTTCAAATGAAAAAGATATATTTTTTCAATGTCGTGGAAAAAAACTCGGTGTTACTGAAATAGCTGATAATGAATCATTTTCACGTTTTTTAGCTGATCAAATTATAAAAAAACATTTGGCTAAA GGTCATACAAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGAAAATATGCT GAATATAAAGATATAAAACATTTC TTTGTTTTTACAAGTAAACCA GGT GTATTCGTGATATGTAAACATGATTCGGGAGACAAATAAAAAAACATATGAAAGTTATTGTTGTGATGATCCATCTGATTTAGAAAAATTAACACGT] [+] EMBL SMAA69036 [ AAATATTACTATTAGCTGTTTACAAGATAGATTGAAATTTAGTAAATCATCATCAATTATTCCTCATTCAACAAGAAAATATGCT GAATATAAAGATATAAAAAATTTCTTTTGTTTTTAC AGTAAACAAGGGTGGTATTCGTGATAT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||