These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9318#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1510 fasta sequence [CGAGGTCGGTATGAACCTGGGGTTACACGCCTTGACGTTGTCGTTTTTCCTTAGTTCTATTTTAGTTTACTGTGGTAGGGATTTTTATGCCATTCTAAACGTACCTCGTAATGCAAATAAAAGCGAGATCAAAAAAGCCTACAGATCACTTGCTAGCAAGCTGCATCCCGATAAAAATCGTGAAGATCCAAAAGCTGACCAAAAGCCTCAAGACATAAATGAAGCTTATGAAGTTCTCAGCAAAGATGACAAGCGCAAACTTTACGATCAGTACGGTGAAGAGGGTCTAAAGAGTCATGGAGAGCATGATTTTAATCCGTTTGGTTTTGCTCGTGCTCCGGAAGAGGAACCACGTGGAGGTGATATTGTTATAGACCTGTGGGTTACTCTGGAAGAACTCTATGTGGGAAACTCTGTAAAAGTGACTAGGCGTAAACTGATCAAAATGCCTGCACCTGGAACTCGCAAGTGCAACTGTCGTATGGAGTTACGTACAACAGTCCTAGGCCCTGGTCGTTTCCAGATGCACCAAGAACAAGTCTGTAGCGACTGCCCAAACGTCCAGTTTGTACCTGAGGAACGAACTCTCTATGTGGAACTTAAGCCGGGAATGAGAGATGGGTACTTTTATCCGTTCGTTGGAGAAGGGGAACCTCATTCTGATGGTGAATCAGGTGATCTGAAATTTCGTATTAAACAGAAAAAACACAATATATTTCATCGACGAGGTGATGACCTATACACTAACATCACTCTAACTCTGGTTCAATCTCTGAATGGATATCACGTGACATTTC-CACATTTAGACGGCCATCAAGTTGTCATCTCAAGTGATTATGTGACGT-CTCCAGGGACAATTATTCATAAACCAAATGAAGGAATGCCTAATTTTGAAAATAATAAGCGTCGTGGTTCTCTTTACATTACAATCGATGTTCAGTTTCCCGAAAACTTTAAAATTCCTGAAGATAAACGTAAAATGATTTCAGAACTTTTTCACTCATCCAGTACCAGCACCACTAATACTCCATCATCATCTCAGCCTGATCAACCAACACCAGCACAAATTTACAATGGTCTAGATAGAGGTAGCAAAAAGATATATGTAAAAAATTAACTGTATCGATCAGGTTCTGTGTGAAATACCCTGTTTGTGTTTTCCTGTAATTAAGAATCGTTGATTTATACAACCTACTGTGTACAGTTGTCTTTTTCTTCTACTCATTCATTTGCATTTTTATGATATTTGCTGTTGTTGTTGACTAGTTCTCAGACCTGTTTTTTGATTNTCTTANAATATTCCCAACTTTGCGGATGCAAGTACAGTCAAATTCTGTTTGTTTTTTTATTANAAAAGACTTGNTATTAATAAATATTGAGCAGATTGAATTGATAGTTGATTGTTTTGCTTGATAAATGCCAAGACGATTTATTGCAACGAGTTAATTAGGTAAATAATTTAACTCATCATTTTTGTCTATGTAAATCAAAATGCCAATAAAAAAATGTT] [+] EMBL CD161866 [CGAGGTCGGTATGAACCTGGGGTTACACGCCTTGACGTTGTCGTTTTTCCTTAGTTCTATTTTAGTTTACTGTGGTAGGGATTTTTATGCCATTCTAAACGTACCTCGTAATGCAAATAAAAGCGAGATCAAAAAAGCCTACAGATCACTTGCTAGCAAGCTGCATCCCGATAAAAATCGTGAAGATCCAAAAGCTGACCAAAAGCCTCAAGACATAAATGAAGCTTATGAAGTTCTCAGCAAAGATGACAAGCGCAAACTTTACGATCAGTACGGTGAAGAGGGTCTAAAGAGTCATGGAGAGCATGATTTTAATCCGTTTGGTTTTGCTCGTGCTCCGGAAGAGGAACCACGTGGAGGTGATATTGTTATAGACCTGTGGGTTACTCTGGAAGAACTCTATGTGGGAAACTCTGTAAAAGTGACTAGGCGTAAACTGATCAAAATGCCTGCACCTGGAACTCGCAAGTGCAACTGTCGTATGGAGTTACGTACAACAGTCCTAGGCCCTGGTCGTTTCCAGAT ] [+] EMBL CD195178 [ TCATGGAGAGCATGATTTTAATCCGTTTGGTTTTGCTCGTGCTCCGGAAGAGGAACCACGTGGAGGTGATATTGTTATAGACCTGTGGGTTACTCTGGAAGGACTCTATGTGGGAAACTCTGTAAAAGTGACTAGGCGTAAACTGATCAAAATGCCTGCACCTGGAACTCGCAAGTGCAACTGTCGTATGGAGTTACGTACAACAGTCCTAGGCCCTGGTCGTTTCCAGATGCACCAAGAACAAGTCTGTAGCGACTGCCCAAACGTCCAGTTTGTACCTGAGGAACGAACTCTCTATGTGGAACTTAAGCCGGGAATGAGAGATGGGTACTTTTATCCGTTCGTTGGAGAAGGGGAACCTCATTCTGATGGTGAATCAGGTGATCTGAAATTTCGTATTAAACAGAAAAAACACAATATATTTCATCGACGAGGTGATGACCTATACACTAACATCACTCTAACTCTGGTTCAATCTCTGAATGGATATCACGTGACATTTC CACATTTAGACGGCCATNTAGTNGTCAT ] [-] EMBL CD161935 [ GCGACTGCCCAAACGTCCAGTTTGTACCTGAGGAACGAACTCTCTATGTGGACCTTAAGCCGGGAATGAGAGATGGGTACTTTTATCCGTTCGTTGGAGAAGGGGAACCTCATTCTGATGGTGAATCAGGTGATCTGAAATTTCGTATTAAACAGAAAAAACACAATATATTTCATCGACGAGGTGATGACCTATACACTAACA ] [-] EMBL CD183492 [ CAGTTTGTACCTGAGGAACGAACTCTCTATGTGGAACTTAAGCCGGGAATGAGAGATGGGTACTTTTATCCGTTCGTTGGAGAAGGGGAACCTCATTCTGATGGTGAATCAGGTGATCTGAAATTTCGTATTAAACAGAAAAAACACAATATATTTCATCGACGAGGTGATGACCTATACACTAACATCACTCTAACTCTGGTTCAATCTCTGAATGGATATCACGTNACATTTCTGTAATTTA ACGGCCATCAAGTTGTCATCTCAAGTGATTATGTGACGTATTCCAG ] [+] EMBL CD140482 [ CACAATATATTTCATCGACGAGGTGATGACCTATACACTAACATCACTCTAACTCTGGTTCAATCTCTGAATGGATATCACGTGACATTTC CACATTTAGACGGCCATCAAGTTGTCATCTCAAGTGATTATGTGACGT CTCCAGGCACAATTATTCATAAACCAAATGAAGGAATGCCTAATTTTGAAAATAATAAGCGTCGTGGTTCTCTTTACATTACAATCGATGTTCAGTTTCCCGAAAACTTTAAAATTCCTGAAGATAAACGTAAAATGATTTCAGAACTTTTTCACTCATCCAGTACCAGCACCACTAATACTCCATCATCATCTCAGCCTGATCAACCAACACCAGCACAAATTTACAATGGTCTAGATAGAGGTAGCAAAAAGATATATG ] [+] EMBL CD140421 [ CACAATATATTTCATCGACGAGGTGATGACCTATACACTAACATCACTCTAACTCTGGTTCAATCTCTGAATGGATATCACGTGACATTTC CACATTTAGACGGCCATCAAGTTGTCATCTCAAGTGATTATGTGACGT CTCCAGGGACAATTATTCATAAACCAAATGAAGGAATGCCTAATTTTGAAAATAATAAGCGTCGTGGTTCTCTTTACATTACAATCGATGTTCAGTTTCCCGAAAACTTTAAAATTCCTGAAGATAAACGTAAAATGATTTCAGAACTTTTTCACTCATCCAGTACCAGCACCACTAATACTCCATCATCATCTCAGCCTGATCAACCAACACCAGCACAAATTTACAATGGTCTAGATAGAGGTAGCAAAAAGATATATGTAAAAAATTAACTGTATCGATCAGGTTCTGTGT ] [+] EMBL CD079039 [ TCTGAATGGATATCACGTGACATTTC CACATTTAGACGGCCATCAAGTTGTCATCTCAAGTGATTATGTGACGT CTCCAGGGACAATTATTCATAAACCAAATGAAGGAATGCCTAATTTTGAAAATAATAAGCGTCGTGGTTCTCTTTACATTACAATCGATGTTCAGTTTCCCGAAAACTTTAAAATTCCTGAAGATAAACGTAAAATGATTTCAGAACTTTTTCACTCATCCAGTACCAGCACCACTAATACTCCATCATCATCTCAGCCTGATCAACCAACACCAGCACAAATTTACAATGGTCTAGATGGAGGTAGCAAAAAGATATATGTAAAAAATTAACTGTATCGATCAGGTTCTGTGTGAAATACCCTGTTTGTGTTTTCCTGTAATTAAGAATCGTTGATTTATACAACCTACTGTGTACAGTTGTCTTTTTCTTCTACTCATTCATTTGCATTTTTATGATATTTGCTGTTGTTGTTGACTAGTTCTCAGACCTGTTTTTTGATTNTCTTANAATATTCCCAACTTTGCGGATGCAAGTACAGTCAAATTCTGTTTGTTTTTTTATTANAAAAGACTTGNTATTAATAAATATTGAGCAGATTGAATTGATAGTTGATTGT ] [-] EMBL CD073492 [ CATCATCATTTCAGCCTGATCAACCAACCCCAGCACAAATTTACAATGGTTTAGATGGAGGTAGCAAAAAGATATATGTAAAAAATTAACTGTATCGATCAGGTTTTGTGTGAAAAACCCCGTTTGTGTTTTCCTGTAATTAAAAATCGTTGATTTATACA ] [-] EMBL CD073491 [ TTGCATTTTTATGAAATTTGCTGTTGTTGTTGACTAGTTTTCAGACCTGTTTTTTGATTTTTTTAAAAAATTCCCAACTTTGCGGATGCAAGTACAGTCAAATTCTGTTTGTTTTTTTATTAAAAAAGACTTGTTATTAATAAATATTGAGCAGATTGAATTGAAAGTTGATTGTTTTGCTTGATAAATGCCAAGACGATTTATTGCAACGAGTTAATTAGGTAAATAATTTAACTCATCATTTTTGTCTATGTAAATCAAAATGCCAATAAAAAAATGTT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||