These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9364#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 932 fasta sequence [ATATGGCAAGGAGTGTAAAATTTGTGATCGCCCCTTTACTGTATTTTGTTGGTGTCCTGGTCCTAAAGCCAGATTCAAAAAGACTGAAGTCTGTCAGAGCTGCGCAAAGATCAAAAATGTTTGCCAGACATGTCTGTTCGACCTCGAATATGGTCTTCCTGTTGAAGTCCGTGATAAAGCACTTCGTTTATCACAACAATTGCCGAAAAATGATGTTAATCGAGAATATTTCCACCAACAAATTGAACAGAACCTTGAAGTGGAAGGTGACATAACAGCTCCATATGGAGGAAATCAGCTAATTGGAAAAGCTATTTCAAACACAGCGTCGGCAAGCAGTTCTAGCGGTGGTGGGGGCACAGATTTACTATTAAAGTTAGCCCGTACTGCACCGTATTATCGTAGAAATCGCCCACACATATGCTCTTTTTGGGTGAAGGGTGAATGTAGGAGAGGAGAAGAATGTCCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAATCTGAGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAGGACCTATGATCGATTAATTTTGGGTGGTCATCGACTAACAGTCAATTGGGGAAAATCACCAGCAGCTTTGGCGGCTGCGAACTCTCATTCATCAACAGAAACTGGCGATATAAGTCTGCCTCCTGTTCCTGGTCTACCTTTACCAC] [+] EMBL CD153916 [ATATGGCAAGGAGTGTAAAATTTGTGATCGCCCCTTTACTGTATTTTGTTGGTGTCCTGGTCCTAAAGCCAGATTCAAAAAGACTGAAGTCTGTCAGAGCTGCGCAAAGATCAAAAATGTTTGCCAGACATGTCTGTTCGACCTCGAATATGGTCTTCCTGTTGAAGTCCGTGATAAAGCACTTCGTTTATCACAACAATTGCCGAAAAATGATGTTAATCGAGAATATTTCCACCAACAAATTGAACAGAACCTTGAAGTGGAAGGTGACATAACAGCTCCATATGGAGGAAATCAGCTAATTGGAAAAGCTATTTCAAACACAGCGTCGGCAAGCAGTTCTAGCGGTGGTGGGGGCACAGATTTACTATTAAAGTTAGCCCGTACTGCACCGTATTATCGTAGAAATCGCCCACACATATGCTCTTTTTGGGTGAAGGGTGAATGTAGGAGAGGAGAAGAATGTCCATATAGGCATGANAAGCCTACCGATCCTGATGATCCCCT ] [+] EMBL CD136389 [ ATTGAACAGAACCTTGAAGTGGAAGGTGACATAACAGCTCCATATGGAGGAAATCAGCTAATTGGAAAAGCTATTTCAAACACAGCGTCGGCAAGCAGTTCTAGCGGTGGTGGGGGCACAGATTTACTATTAAAGTTAGCCCGTACTGCACCGTATTATCGTAGAAATCGCCCACACATATGCTCTTTTTGGGTGAAGGGTGAATGTAGGAGAGGAGAAGAATGTCCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAATCTGAGAGACCGTTACTACGGCCACGATG ] [+] EMBL CD166472 [ AGGAGAAGAATGTCCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAATCTGAGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAA TGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTCTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGC ] [+] EMBL CD129571 [ AAGAATGTCCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAATCTGAGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATCGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAGGACCTATGATCGATTAATTTTGGGTGGTCATCGACTAACAGTCAATTGGGGAAAATCACCAGCAGCTTTGGCGGCTGCGAACTCTCATTCATCAACAGAAACTGGCGATATAAGTC ] [-] EMBL CD129591 [ ATGTCCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAATCTGAGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAGGACCTATGATCGATTAATTTTGGGTGGTCATCGACTAACAGTCAATTGGGGAAAATCACCAGCAGCTTTGGCGGCTGCGAACTCTCATTCATCAACAGAAACTGGCGATATAAGTCT ] [-] EMBL CD155741 [ TGTCCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAATCTGAGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTCACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAAGACCTATGATCGATTAATTTTGGGTGGTCATCGACTAACAGTCAATTGGGGAAAATCACCAGCAGCTTTGGCGGCTGCGAACTCTCATTCATCAACAGAAACTGGCGATA ] [+] EMBL CD127790 [ CCATATAGGCATGAAAAGCCTACCGATCCTGATGATCCCCTTTCTGACCAGAACCTGAGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAGGACCTATGATCGATTAATTTTGGGTGGTCATCGACTAACAGTCAATTGGGGAAAATCACCAGCAGCTTTGGCGGCTGCGAACTCTCATTCATCAACAGAAACTGGCGATATAAGTCTGCCTCCTGTTCCTGGTCTACCTTTACCAC] [+] EMBL CD181797 [ AGAGACCGCTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAGGACCTATGATCGATTAATTTGGGGTGtc ] [+] EMBL CD181856 [ AGAGACCGTTACTACGGCCACGATGATCCAGTGGCAGCCAAATTGCTGTCGAAATATGACACAATGCCTAAACTTGTTCCTCCTGAGGATCGTACAATAACCACACTATATATTGGGGGTATTCCTGATGGAATGACAGAAAAAGACCTTCGCAATCATTTTTACCAGTTTGGAGAGCTACGTTCTGTAAATCTCCATGCCAAACAACATTGTGCTTTCATACAGTTCGCAACTAGAGGTGCCGCTGAACGTGCAGCTGAGAGGACCTATGATCGA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||