These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9388#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1028 fasta sequence [ATAATTATATGATAAATGAGCATCATTATTAAAAAATTTAAATTTTGCACGAACATATATAACAAACTATTTCTTAAAATAAAGGATAAATAGGGTCAACATATTTCAATGGACTAAGGAAATATTAAAAATTAGTTTTGAATAACAATGTGGATTAATACCACATTCCCATCAAAATGAAAGGAAAAAGCGACGATTAGAAAATACACCGACGACATAATTTACAAAAAAAGAAGAGAGGAAGGACGATGACGACGACGATACAGAATAGCGCTGTGGAGAGCAAAAAGCTCATTTCTCCCTGAGAATTTTAATTGTAGTGGTAGTTTCAGTTACGATGATGAGGAGAGAAAGTAGGAGACACTCAAAAAGCCGGAATATTGTTTCGCCATTTGGCATTTCAATCCGTCTTCTTAGATTTCTTGTGTTTACTCTGAACAGGAACAGACTCTTTTCGCTCTGTCCGTTGTT--GTGTTTTTGAACTCAACCTTTTATACTGAGTCTTATTCAAAGAGCGAACCATCAGTACACTGACTCCGAAGCAAAGAACAGTAGCCATGATTGTTACTGAATAAAATCCAAATCGTCCAACATCCGAGAAAACCGCAAGTACGGGATAAGGGTAGAAACTATGGATGCGTATAAGGTATTCCACGTAGATTAAATATCCACCGAAGTATG-CTAGAAGAAACAGGATTGAGTTCGATATAGGAACGATT-GTTGGTCTCCATAGTAAAGCGTCAATTATGATGGCAGGAGTTCCAATAGTGTGCTAAAATGAAATTTATGGATGGACTTACACAAGCATGATTGTACCACCATGGGACGGATTTCATTTCTGATTCATTCGCCAATAAGGTCTTATCTGAGATGAAAATGCCCCAGAACATGATACACACAATTAAATTGGCTGTAAATGCGAGAGAGTATAGTGAGCTGTGCATTTTAAAGATTTTAAAATACTGCAAAGGAGTCGCCAAAGCATAGTAAGCAATCTGCAGTGATATTGTCAGGATTGTAAGAAAACG] [+] EMBL CD076566 [ATAATTATATGATAAATGAGCATCATTATTAAAAAATTTAAATTTTGCACGAACATATATAACAAACTATTTCTTAAAATAAAGGATAAATAGGGTCAACATATTTCAATGGACTAAGGAAATATTAAAAATTAGTTTTGAATAACAATGTGGATTAATACCACATTCCCATCAAAATGAAAGGAAAAAGCGACGATTAGAAAATACACCGACGACATAATTTACAAAAAAAGAAGAGAGGAAGGACGATGACGACGACGATACAGAATAGCGCTGTGGAGAGCAAAAAGCTCATTTCTCCCTGAGAATTTTAATTGTAGTGGTAGTTTCAGTTACGATGATGAGGAGAGAAAGTAGGAGACACTCAAAAAGCCGGAATATTGTTTCGCCATTTGGCATTTCAATCCGTCTTCTTAGATTTCTTGTGTTTACTCTGAACAGGAACAGACTCTTTTCGCTCTGTCCGTTGTT GTGTTTTTGAACTCAACCTTTTATACTGAGTCTTATTCAAAGAGCGAACCATCAGTACACTGACTCCGAAGCAAAGAACAGTAGCCATGATTGTTACTGAATAAAATCCAAATCGTCCAACATCCGAGAAAAa ] [-] EMBL CD168913 [ TATTAAAAATTAGTTTTGAATAACAAAGTGGATTAATACCACATTCCCATCAAAATGAAAGGAAAAAGCGACGATTAGAAAATACACCGACGACATAATTTACAAAAAAAGAAGAGAGGAAGGACGATGACGACGACGATACAGAATAGCGCTGTGGAGAGCAAAAAGCTCATTTCTCCCTGAGAATTTTAATTGTAGTGGTAGTTTCAGTTACGATGATGAGGAGAGAAAGTAGGAGACACTCAAAAAGCCGGAATATTGTTTCGCCATTTGGCATTTCAATCCGTCTTCTTAGATTTGGTGTGTTTACTCTGAACAGGAACAGACTCTTTTCGCTCTGTCCGTTGTTCGGTGTgct ] [-] EMBL CD119006 [ GAGCAAAAAGCTCATTTCTCCCTGAGAATTTTAATAGTAGTGGTAGTTTCAGTTACGATGATGAGGAGAGAAAGTAGGAGACACTCAAAAAGCCGGAATATTGTTTCGCCATTTGGCATTTCAATCCGTCTTCTTAGATTTCTTGTGTTTACTCTGAACAGGAACAGACTCTTTTCGCTCTGTCCGTTGTT GTGTTTTTGAACTCAACCTTTTATAATGAGTCTTATTCAAGGAGCGAACCATCAGTACACTGACTCCGAAGCAAAGAACAGTAGCCATGATTGTTACTGAATAAAATCCAAATCGTCCAACATCCGAGAAAACCGCAAGTACGGGATAAGGGTAGAAACTATGGATGCGTATAAGGTATTCCACGTAGATTAAATATCCACCGAAGTATGACTAGAAGAAACAGGATTGAGTTCGATATAGGAACGATTAGTTGGTCTCCATAGTAAAGCG ] [-] EMBL CD114524 [ CGATGATGAGGAGAGAAAGTAGGAGACACTCAAAAAGCCGGAATATTGTTTCGCCATTTGGCATTTCAGTCCGTCTTCTTAGATTTCTTGTGTTTACTCTGAACAGGAACAGACTCTTTTCGCTCTGTCCGTTGTT GTGTTTTTGAACTCAACCTTTTATACTGAGTCTTATTCAAAGAGCGAACCATCAGTACACTGACTCCGAAGCAAAGAACAGTAGCCATGATTGTTACTGAATAAAATCCAAATCGTCCAACATCCGAGAAAACCGCAAGTACGGGATAAGGGTGGAAACTATGGATGCGTATAAGGTATTCCACGTAGATTAAATATCCACCGAAGTATG CTAGAAGAAACAGGATTGAGTTCGATATAGGATCGATT GTTGGTCTCCATAGTAAAGCGTCAATTATGATGGCAGGAGTTCCAATAGTGTGacaa ] [-] EMBL CD122289 [ GTGTTTACTCTGAACAGGAACAGACTCTTTTCGCTCTGTCCGTTGTT GTGTTTTTGAACTCAACCTTTTATACTGAGTCTTATTCAAGGAGCGAACCATCAGTACACTGACTCCGAAGCAAAGAACAGTAGCCATGATTGTTACTGAATAAAATCCAAATCGTCCAACATCCGAGAAAACCGCAAGTACGGGATAAGGGTAGAAACTATGGATGCGTATAAGGTATTCCACGTAGATTAAATATCCACCGAAGTATG CTAGAAGAAACAGGATTGAGTTCGATATAGGAACGATT GTTGGTCTCCATAGTAGAGCGTCAATTATGATGGCAGGAGTTCCAATAGTGTGCTAAAATAAAATTTATGGATGGACTTACACAAGCATGATTGTACCACCATGGGACGGATTTCATTTTTGATTCATTCGCCAATAAGGTTTTATTTGAGATGAAAATGCCCCAGAACATGATACACACAATTTAATTG ] [-] EMBL CD165734 [ AGCCATGATTGTTACTGAATAAAATCCAAATCGTCCAACATCCGAGAAAACCGCAAGTACGGGATAAGGGTAGAAACTATGGATGCGTATAAGGTATTCCACGTAGATTAAATATCCACCGAAGTATG CTAGAAGAAACAGGATTGAGTTCGATATAG ] [+] EMBL CD158450 [ ATAGTGTGCTAAAATGAAATTTATGGATGGACTTACACAAGCATGATTGTACCACCATGGGACGGATTTCATTTCTGATTCATTCGCCAATAAGGTCTTATCTGAGATGAAAATGCCCCAGAACATGATACACACAATTAAATTGGCTGTAAATGCGAGAGAGTATAGTGAGCTGTGCATTTTAAAGATTTTAAAATACTGCAAAGGAGTCGCCAAAGCATAGTAAGCAATCTGCAGTGATATTGTCAGGATTGTAAGAAAAC ] [+] EMBL CD158405 [ TGAANTTTATGGATGGACTTACACAAGCATGATTGTACCACCATGGGACGGATTTCATTTCTGATTCATTCGCCAATAAGGTCTTATCTGAGATGAAAATGCCCCAGAACATGATACACACAATTAAATTGGCTGTAAATGCGAGAGAGTATAGTGAGCTGTGCATTTTAAAGATTTTAAAATACTGCAAAGGAGTCGCCAAAGCATAGTAAGCAATCTGCAGTGATATTGTCAGGATTGTAAGAAAAC ] [-] EMBL CD158453 [ tagtgtgACAAGCATGATTGTACCACCATGGGACGGATTTCATTTCTGATTCATTCGCCAATAAGGTCTTATCTGGGATGAAAATGCCCCAGAACATGATACACACAATTAAATTGGCTGTAAATGCGAGAGAGTATAGTGAGCTGTGCATTTTAAAGATTTTAAAATACTGCAAAGGAGTCGCCAAAGCATAGTAAGCAATCTGCAGTGATATTGTCAGGATTGTAAGAAAACG] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||