These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9537#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 746 fasta sequence [CAAGCACAATATTCATGGATGAAATCGATTCAATTTGTTCTCGACGTGGTAGTGAATCGGAACACGAAAGTTCTCGCCGTGTTAAATCTGAACTTTTAATGCAAATGGATGGAGTAACAGGAGCTACAGGACAAGAAGAGGATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT-TGAG-AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC-TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA-TTTCG-AAG-AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTCAAACCTACGTGTCTCAAATCATCAGGTTATATGAATACTACATTCATAGGTCAAATGGTCGAATA] [+] EMBL CD191654 [CAAGCACAATATTCATGGATGAAATCGATTCAATTTGTTCTCGACGTGGTAGTGAATCGGAACACGAAAGTTCTCGCCGTGTTAAATCTGAACTTTTAATGCAAATGGATGGAGTAACAGGAGCTACAGGACAAGAAGAGGATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTNTCAGCCAGTAATGTT ] [+] EMBL CD191923 [CAAGCACAATATTCATGGATGAAATCGATTCAATTTGTTCTCGACGTGGTAGTGAATCGGAACACGAAAGTTCTCGCCGTGTTAAATCTGAACTTTTAATGCAAATGGATGGAGTAACAGGAGCTACAGGACAAGAAGAGGATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATC ] [+] EMBL CD164568 [ ccaccAAGAGGATCCTACAAAATCTGTCATGGTTCTTGCTGCTACTAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACT ] [+] EMBL CD164514 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCGAAAG AACCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATNTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ] [+] EMBL CD164627 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACACACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ] [+] EMBL CD164570 [ GATCCTACAAAATCTGTCATGGTTCTTGCTGCTACTAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG GAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATNTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ] [+] EMBL CD121840 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCT TGAG AAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAGATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGACAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAACGATGTCTATGCGACGAGCTATAGAAGGACTCCCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATG ] [+] EMBL CD164509 [ GATCCTACAAAATCTGTTATGGTTCTTGCTGCTACAAATTTCCCTTGGGACATTGACGAAGCTTTGCGTAGACGTCTNTGAGAAAACGAGTGTACATACCACTTCCAAATGTGACTGCACGCAAAACTCTTCTGCAAATCAATTTGAAAGACGTTCCGTTAGCAGAAGATGTAGATTTGGAAAGAATAGCTGAACAATTAGATGGTTATTCCGGTGCAGACATAACCAATGTATGCAGAGATGCTTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGANTTTCG AAGAAAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTC ] [-] EMBL CD067289 [ TTCAATGATGTCTATGCGACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTC TTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGCTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTG ] [-] EMBL CD121978 [ ACGAGCTATAGAAGGACTCTCAGTAGAGCAAATCAAAGGTCTTTAATACTGCTACACTTAATCAGCCGACACGAATGGCTGA TTTCG AAG AAGCAGTCGGTCGTGTATGCAGATCTGTTTCAGCCAGTAATGTTGAACGGTATGAGAAATGGATGACGGAGTTTGGGGCTACATGAACTGCTGATTTACGTATACCGATGTGGACTTATACCATTCGCACATATCTGATTGGCTTATCCAGATTTTTACCTTGCAAATAAATGTACTTGATTGTCATATCTCAAACCTACGTGTCTCAAATCATCAGGTTATATGAATACTACATTCATAGGTCAAATGGTCGAATA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||