These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9551#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 877 fasta sequence [AAAGCAGTTGAACAAATGAATGAAGCAAAACATATTGTTCGAGGTGGGGATAAACCCATAACTTGTAAACTGGCTGATAAAGCAGATCCTAGACGACGTAATGCTGCTCCTAGTGCACAAGCGTTTGTTGCCGCTGCTGGATTACATCCACAAATACCTGTTGCTAATAATTTAACGCGTACAGCTCAAGGTCTCTCTAATCTTGCTTCTCTTCAAGCTTTAGGTCAGGCTCAACAATCTACCTTTACTCCTCAATTTCCTCTAACTGCACAGTTAGTGCAACCTTTGCATCAGACTCCTGTTGTTGTTCCAAATATGCATTCATCTTCAATATCCTCACAAAACCGTAATATTTTATTACCATCAACATTATTGCAGAATGGTCCATGTTGTGGTAGTACAGCTGTCCCAGTTTCATTCCCTTCCATTGGAACGAATGGGGGTAATGGTCAGTCGACTATTTCTACTAGTTCTTACAGAGCTAACTTAGTCGGGATACCTCAAGGTCAAATGCCTTCTGGGGCTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG-GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAACCGACACCTAGTGTTCCTGGAGCTGCAGTTGCAAGCAATTCTCAAATGGTTATTTTGGCTCAGACCCCTATTAATTGTCTTTATCAATCATCAAATGGATCCACGTCAGCCG] [+] EMBL CD184680 [AAAGCAGTTGAACAAATGAATGAAGCAAAACATATTGTTCGAGGTGGGGATAAACCCATAACTTGTAAACTGGCTGATAAAGCAGATCCTAGACGACGTAATGCTGCTCCTAGTGCACAAGCGTTTGTTGCCGCTGCTGGATTACATCCACAAATACCTGTTGCTAATAATTTAACGCGTACAGCTCAAGGTCTCTCTAATCTTGCTTCTCTTCAAGCTTTAGGTCAGGCTCAACAATCTACCTTTACTCCTCAATTTCCTCTAACTGCACAGTTAGTGCAACCTTTGCATCAGACTCCTGTTGTTGTTCCAAATATGCATTCATCTTCAATATCCTCACAAAACCGTAATATTTTATTACCATCAACATTATTGCAGAATGGTCCATGTTGTGGTAGTACAGCTGTCCCAGTTTCATTCCCTTCCATTGGAACGAATGGGGGTAATGGTCAG ] [+] EMBL BF936738 [ TTCCTCTAACTGCACAGTTAGTGCAACCTTTGCATCAGACTCCTGTTGTTGTTCCAAATATGCATTCATCTTCAATATCCTCACAAAACCGTAATATTTTATTACCATCAACATTATTGCAGAATGGTCCATGTTGTGGTAGTACAGCTGTCCCAGTTTCATTCCCTTCCATTGGAACGAATGGGGGTAATGGTCAGTCGACTATTTCTACTAGTTCTTACAGAGCTAACTTAGTCGGGATACCTCAAGGTCAAATGCCTTCTGGGGCTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAACCGACACCTAGTGTTCCTGGAGCTGCAGTTGCAAGCAATTCTCAAATGGTTATTTTGGCTCAGACCCCTATTAATTGTCGTTATCAATCATCAAATGGATCCACGTCAGCCG] [+] EMBL AI975553 [ TTCCTCTAACTGCACAGTTAGTGCAACCTTTGCATCAGACTCCTGTTGTTGTTCCAAATATGCATTCATCTTCAATATCCTCACAAAACCGTAATATTTTATTACCATCAACATTATTGCAGAATGGTCCATGTTGTGGTAGTACAGCTGTCCCAGTTTCATTCCCTTCCATTGGAACGAATGGGGGTAATGGTCAGTCGACTATTTCTACTAGTTCTTACAGAGCTAACTTAGTCGGGATACCTCAAGGTCAAATGCCTTCTGGGGCTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAACCGACACCTAGTGTTCCTGGAGCTGCAGTTGC ] [+] EMBL CD166456 [ CATCTTCAATATCCTCACAAAACCGTAATATTTTATTACCATCAACATTATTGCAGAATGGTCCATGTTGTGGTAGTACAGCTGTCCCAGTTTCATTCCCTTCCATTGGAACGAATGGGGGTAATGGTCAGTCGACTATTTCTACTAGTTCTTACAGAGCTAACTTAGTCGGGATACCTCAAGGTCAAATGCCTTCTGGGGCTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAACCGACACCTAGTGTCCCT ] [-] EMBL CD166358 [ ATCTTCAATATCCTCACAAAACCGTAATATTTTATTACCATCAACATTATTGCAGAATGGTCCATGTTGTGGTAGTACAGCTGTCCCAGTTTCATTCCCTTCCATTGGAACGAATGGGGGTAATGGTCAGTCGACTACTTCTACTAGTTCTTACAGAGCTAACTTAGTCGGGATACCTCAAGGTCAAATGCCTTTTGGGGCTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAAT ] [+] EMBL CD111925 [ gcaaCAAATGCCTTCTGGGGCTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGCTCCAGATCATGCGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGCGCTTTTCAATCAGTTGCATTTGGAACTCCTACAACTTCTA ] [+] EMBL BG931257 [ gTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAACCGACACCTAGTGTTCCTGGAGCTGCAGTTGCAAGCAATTCTCAAATGGTTATTTTGGCTCAGACCCCTATTAATTGTCTTTATCAATCATCAAATGGA ] [+] EMBL BG930959 [ gTCAACCAAATCAAGGAACGGCAATTGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTTCAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTTTATACGGCAAATGTGTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAGCCGACACCTAGTGTTCCTGG ] [+] EMBL BG931109 [ TCAACCAAATCAAGGAACGGCAATAGTTGCTGGATATGCTGATTATCCCTTCAGTCGTTCCAAATCATGTGTCAATGTACAATCCGGAAACTTCTCAGCTAACAATCTCCCTGTGTATACGGCAAATG GTAACTCCTCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATTTGGAACT ] [-] EMBL BG931511 [ TCTCAATCCACTCATAGTGCTTTCCAATCAGTTGCATGTGGAACTCCTACAACTTCTAATTATCAGGGAGGATTATCGTATGTTCATCATCAACAACAGTCACAACCGACACCTAGTGTTCCTGGAGCTGCAGTTGCAAGCAATTCTCAAATGGTTATTTTGGCTCAGACCCCTATTAATCGTCTTTATCAATCATCAAATGGAc ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||