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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9593#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3361 fasta sequence
[AAGTGAAGTCCTTGAAATGCGTCTGTTTATTGGAGGTTATGGGGAATTGTTTCCAAGGAATAGTTATATCGATGTTTGTAAGGGATAGAGCGTTCACTTTTGGACACGGTGAGATAAGCAACAGCGTTGGCGTTAAAGCCTCACGGCCAATGGATGATGTCAGTCCTTTCCTACCGTCCAGATCCTTGTCCAGCAAAGCTAGAGTTTCTGAAACTTTTCAAAACAGTCCGCCTTTGGTTAGGTGTGTGAAATCCAAGCCGCAGTCATGTCAACCTACAAATCCTACATCAAACTTGGCGATAAGTCCTTCTCATCCTTCTGAAACACAAACTGTAACAACTTCCAAGATTAGTGGTAGAAGTGTTAAGCAGTTAAAACCTAAACATTACGTTGCATTATTCGATTATAATGCTCGAACGGAGGAGGAAACATTTCTTTCCAGAAGAGATGAAGTTTTACTGTTAGCTGACACGGATTCAGAATGGTGGCTTGTACAGAACTTAAGTTCCGGTAGGAAAGGATATGTTCCAAGCTCGTTTGTTGCGAAAAAAGGATCAGTTGAGGCTGAAGAATGGTTTATGCCCATGTTGTCGCGTAAGGACTCCGAAAGACTACTACTACTGGAAGGCAACGCTCAAGGCGTATTTTTAGTACGTGAAAGTGAAACCAGCCAAGGTTCCCTAACATTATCTGTACGAGATGAAGAACGTGGATTATCCGGTATTATGAATACAGTGAAACACTATCGTATCAAGCATCCGGATTATCGCTATTACTATATTACAACCAAATGTAGTTTTTCTAGTCTTCAAGAATTAATACAATTTTACTCAATTGATTCTCATGGTTTGTGTTGTAAACTTACAAGGGCATGTCTATGTCCACCACCAATAACTTCAGATTTATCAGTTAAAACAAAAGATCATTGGGAAATATCTAAATCTTCAATTGTTTTAATTGAAAAACTTGGAGCTGGACAATTTGGTGAAGTTTGGAAAGGTACTTGGAATGGTACTACAGAAGTTGCTGTAAAAACTCTAAAACAAGGTACAATGACCAAGGAGGATTTTCTAAAAGAAGCTCGTATTATGCGTGCAGCTCAACACCCGAAATTAGTTCGATTATATGCTGTATGCACAGAAGATCCTATTTATATTGTTACTGAATTAATGTGTAATGGTAGTCTACTACAATATCTTCGTGATGGACCTGGAAAAAATTTACTGATTAATCAATTGGTTGATATGATGGCTCAGATTGCTAATGGAATGGCTTATTTGGAGAAGGAGCACTATATTCATCGTGATTTGGCCGCGCGTAATATTTTAGTTGGGGAAAATAATTGTGTTAAAGTGGCTGATTTTGGTTTAGCTCGTATGGTGGAAGATCACTACTGTACATATATGGCGCAGAAAAGTACAAAATTCCCAATTAAATGGACAGCACCAGAGGCTGCATTAATGGGTCGTTTTACAATAAAATCAGATGTCTGGTCATTTGGTATTGTCATTTACGAATTAATTACACTAGGTCAAGTTCCTTACCCATCAATGAATAACACAGAGACATTGCATCAAGTTAGTACTGGTTATCGCATGCCACGTCCAGTGAATTGTCCACAACCAATTTATGATATGTTATTACGAATATGGGATAGCTGTCCAGAAAAACGTCCTACATTCTCATCTCTGTTTGAATTTTTCGAAGATTATTTTGTCACTTCTGATGCTAATTATAAACATGCTAATTCAGCATTAACTGGATGTAGTGCTTGTATCACAACAGTTAATAATAATAATAATAATAACAATAATAATAATAATAATAGTCTACACCATCTATCAAACTTAACACCACTTGACACAACAAGTTCATCTAGCACAACGTCGATCAATGTCGACAGTACTCATTCCGCTGTATCCAAATGTTGTAGTGGACGTCTGTTATTAAGAGATAAATTACTGCGCCAAAGTACTCAATAGTTGAACAAACAAGTGATTGAATTCAGTTCTTAATTCTTGTTTGGTTGTGCAGTTTGTCTCCATGTTATTGATTAATGGATCATTGAAACTATGTACCTGAATGTAATCAGATCATTCTTTTTGCTCATCTTTTCTTTTTTTTATAAAAAAAAAATGGAAATTTGTGTTTAATGTTTCATTAACTGCAGTACGAATTATTCCCTAATTTATTTATTTATATAAAGTGTATTGTCCACTTATGATGCATTTGATGATAGTAATGATAATGAGAACGATTTCATTTGACAGTGATGATGATTATTATCATAATAAAACGTTGATGTATTGAAATGTGAAATGTCTGTTTAATTATCAGAATATCTATTGTGATTATGATTAACTTTTATCTTCTTTGATCAACGAACACACTCAAGAAGAATTGCATTTACAAGTAATATCTATTGTAAATATCAATACAACAACCAACATGCGTTACCGTAACTCAGGGTTTTGAACAATGCATTTCATTGTCTTTTTTTTTATTTGTTTAAGCATATACTCTTTGTTGTTTTTTTTCTCCCATTCATCATAAAGTATTTCTCATTATTTCTGTTTATCTTACTCTAATTCTCTTCTTAATTGTATTCCTTCAATCATTCATACCTTTTTATTTATGACTTGTAAATTTATATTATAATATTAATTTCTATGGTGATTGTATTGTGTAACTGACTTTTCATTGACTTATTATGCAATTCCGTGATTCATTCCTTCTCCTCTTTTCTGGAATATATTTCACTTTAAAAAATTATTGAATGATAAAAAAACATTAGGTCATAAATTTCACTTAATTGTTTATCCTTTTTTTCGTGAATAGGATTACATGTGTTGTGGACGATTTGTTTAAGCATTCTTAATTCTAACTTGAAACAATGATGGATTATTATTATTATTATTTCTAATAATGAGTGTTTTGTTTACATTAGTTTACTAATTGACTCCAATAATGATTCAATCCCCCTCCCAAAGAGTAAATACATATTTTCAAAATCAAAAGTATTTGTGGCTTTCTT-TTCATAT-TTGTCATTCTTTTATTTTGAATACAGGAATAACTTGAAGTATATATATATGCATTTTTCCTCCTTATCCTTCCTAATTAACTGACTACATTATTATTATTGATTTATCTATTCATCCTAGGCTAATAATTTTCTTCATAACGATTCCAAAATGTTATAACTTGTCTATGTGTTAATGGTTTTATTGTGATAATCTTCTTTTGCTGTTATAAGTAGGATATGTGTACTTAATTAATCGGTTTGTATGAATGAATTTTCCGATACATGTATGTGTGGTTTTGATGTCAGTTTAATAAATCTCCGTCTCTACAACAAAAAAAA]
[+] EMBL AF232691 [AAGTGAAGTCCTTGAAATGCGTCTGTTTATTGGAGGTTATGGGGAATTGTTTCCAAGGAATAGTTATATCGATGTTTGTAAGGGATAGAGCGTTCACTTTTGGACACGGTGAGATAAGCAACAGCGTTGGCGTTAAAGCCTCACGGCCAATGGATGATGTCAGTCCTTTCCTACCGTCCAGATCCTTGTCCAGCAAAGCTAGAGTTTCTGAAACTTTTCAAAACAGTCCGCCTTTGGTTAGGTGTGTGAAATCCAAGCCGCAGTCATGTCAACCTACAAATCCTACATCAAACTTGGCGATAAGTCCTTCTCATCCTTCTGAAACACAAACTGTAACAACTTCCAAGATTAGTGGTAGAAGTGTTAAGCAGTTAAAACCTAAACATTACGTTGCATTATTCGATTATAATGCTCGAACGGAGGAGGAAACATTTCTTTCCAGAAGAGATGAAGTTTTACTGTTAGCTGACACGGATTCAGAATGGTGGCTTGTACAGAACTTAAGTTCCGGTAGGAAAGGATATGTTCCAAGCTCGTTTGTTGCGAAAAAAGGATCAGTTGAGGCTGAAGAATGGTTTATGCCCATGTTGTCGCGTAAGGACTCCGAAAGACTACTACTACTGGAAGGCAACGCTCAAGGCGTATTTTTAGTACGTGAAAGTGAAACCAGCCAAGGTTCCCTAACATTATCTGTACGAGATGAAGAACGTGGATTATCCGGTATTATGAATACAGTGAAACACTATCGTATCAAGCATCCGGATTATCGCTATTACTATATTACAACCAAATGTAGTTTTTCTAGTCTTCAAGAATTAATACAATTTTACTCAATTGATTCTCATGGTTTGTGTTGTAAACTTACAAGGGCATGTCTATGTCCACCACCAATAACTTCAGATTTATCAGTTAAAACAAAAGATCATTGGGAAATATCTAAATCTTCAATTGTTTTAATTGAAAAACTTGGAGCTGGACAATTTGGTGAAGTTTGGAAAGGTACTTGGAATGGTACTACAGAAGTTGCTGTAAAAACTCTAAAACAAGGTACAATGACCAAGGAGGATTTTCTAAAAGAAGCTCGTATTATGCGTGCAGCTCAACACCCGAAATTAGTTCGATTATATGCTGTATGCACAGAAGATCCTATTTATATTGTTACTGAATTAATGTGTAATGGTAGTCTACTACAATATCTTCGTGATGGACCTGGAAAAAATTTACTGATTAATCAATTGGTTGATATGATGGCTCAGATTGCTAATGGAATGGCTTATTTGGAGAAGGAGCACTATATTCATCGTGATTTGGCCGCGCGTAATATTTTAGTTGGGGAAAATAATTGTGTTAAAGTGGCTGATTTTGGTTTAGCTCGTATGGTGGAAGATCACTACTGTACATATATGGCGCAGAAAAGTACAAAATTCCCAATTAAATGGACAGCACCAGAGGCTGCATTAATGGGTCGTTTTACAATAAAATCAGATGTCTGGTCATTTGGTATTGTCATTTACGAATTAATTACACTAGGTCAAGTTCCTTACCCATCAATGAATAACACAGAGACATTGCATCAAGTTAGTACTGGTTATCGCATGCCACGTCCAGTGAATTGTCCACAACCAATTTATGATATGTTATTACGAATATGGGATAGCTGTCCAGAAAAACGTCCTACATTCTCATCTCTGTTTGAATTTTTCGAAGATTATTTTGTCACTTCTGATGCTAATTATAAACATGCTAATTCAGCATTAACTGGATGTAGTGCTTGTATCACAACAGTTAATAATAATAATAATAATAACAATAATAATAATAATAATAGTCTACACCATCTATCAAACTTAACACCACTTGACACAACAAGTTCATCTAGCACAACGTCGATCAATGTCGACAGTACTCATTCCGCTGTATCCAAATGTTGTAGTGGACGTCTGTTATTAAGAGATAAATTACTGCGCCAAAGTACTCAATAGTTGAACAAACAAGTGATTGAATTCAGTTCTTAATTCTTGTTTGGTTGTGCAGTTTGTCTCCATGTTATTGATTAATGGATCATTGAAACTATGTACCTGAATGTAATCAGATCATTCTTTTTGCTCATCTTTTCTTTTTTTTATAAAAAAAAAATGGAAATTTGTGTTTAATGTTTCATTAACTGCAGTACGAATTATTCCCTAATTTATTTATTTATATAAAGTGTATTGTCCACTTATGATGCATTTGATGATAGTAATGATAATGAGAACGATTTCATTTGACAGTGATGATGATTATTATCATAATAAAACGTTGATGTATTGAAATGTGAAATGTCTGTTTAATTATCAGAATATCTATTGTGATTATGATTAACTTTTATCTTCTTTGATCAACGAACACACTCAAGAAGAATTGCATTTACAAGTAATATCTATTGTAAATATCAATACAACAACCAACATGCGTTACCGTAACTCAGGGTTTTGAACAATGCATTTCATTGTCTTTTTTTTTATTTGTTTAAGCATATACTCTTTGTTGTTTTTTTTCTCCCATTCATCATAAAGTATTTCTCATTATTTCTGTTTATCTTACTCTAATTCTCTTCTTAATTGTATTCCTTCAATCATTCATACCTTTTTATTTATGACTTGTAAATTTATATTATAATATTAATTTCTATGGTGATTGTATTGTGTAACTGACTTTTCATTGACTTATTATGCAATTCCGTGATTCATTCCTTCTCCTCTTTTCTGGAATATATTTCACTTTAAAAAATTATTGAATGATAAAAAAACATTAGGTCATAAATTTCACTTAATTGTTTATCCTTTTTTTCGTGAATAGGATTACATGTGTTGTGGACGATTTGTTTAAGCATTCTTAATTCTAACTTGAAACAATGATGGATTATTATTATTATTATTTCTAATAATGAGTGTTTTGTTTACATTAGTTTACTAATTGACTCCAATAATGATTCAATCCCCCTCCCAAAGAGTAAATACATATTTTCAAAATCAAAAGTATTTGTGGCTTTCTT TTCATAT TTGTCATTCTTTTATTTTGAATACAGGAATAACTTGAAGTATATATATATGCATTTTTCCTCCTTATCCTTCCTAATTAACTGACTACATTATTATTATTGATTTATCTATTCATCCTAGGCTAATAATTTTCTTCATAACGATTCCAAAATGTTATAACTTGTCTATGTGTTAATGGTTTTATTGTGATAATCTTCTTTTGCTGTTATAAGTAGGATATGTGTACTTAATTAATCGGTTTGTATGAATGAATTTTCCGATACATGTATGTGTGGTTTTGATGTCAGTTTAATAAATCTCCGTCTCTACAACAAAAAAAA]
[+] EMBL BF936532 [ AGTGAAGTCCTTGAAATGCGTCTGTTTATTGGAGGTTATGGGGAATTGTTTCCAAGGAATAGTTATATCGATGTTTGTAAGGGATAGAGCGTACACTTTTGGACAC ]
[-] EMBL CD195741 [ AACATTATCTGTACGAGATGAAGAACGTGGATTATCCGGTATTATGAAAACAGTGAAACACTATCGTATCAAGCATCCGGATTATCGCTATTACTATATTACAACCAAATGTAGTTTTTCTAGTCTTCAAGAATTAATACAATTTTACTCAATTGATTCTCATGGTTTGTGTTGTAAACTTACAAGGGCATGTCTATGTCCACCACCAATAACTTCAGATTTATCAGTTAAAACAAAAGATCATTGGGAAATATCTAAATCTTCAAATGTTTTAATTGAAAAACTTGGAGCTGGACAATT ]
[-] EMBL CD184884 [ TTTTCTAGTCTTCAAGAATTAATACAATTTTACTCAATTGATTCTCATGGTTTGTGTTGTAAACTTACAAGGGCATGTCTATGTCCACCACCAATAACTTCAGATTTATCAGTTAAAACAAAAGATCATTGGGAAATATCTAAATCTTCAATTGTTTTAATTGAAAAACTTGGAGCTGGACAATTTGGTGAAGTTTGGAAAGGTACTTGGAATGGTACTACAGAAGTTGCTGTAAAAACTCTAAAACAAGGTACAATGACCAAGGAGGATTTTCTAAAAGAAGCTCGTATTATGCGTGCAGCTCAACACCCGAAATTAGTTCGATTATATGCTGTATGCACAGAAGATCCTATTTATATTGTTACTGAATTAATGTGTAATGGTAGTCTACTACAATATCTTCGTGATGGACCTGGAAAAAATTTACTGATTAATCAATTGGTTG ]
[+] EMBL AF051834 [ aggAACATTTTAGTTGGGGAAAATAATTGTGTTAAGGTGGCTGATTTTGGTTTAGCTCGTATGGTGGAAGATCACTACTGTACATATATGGCGCAGAAAAGTACAAAATTCCCCGTCAAATGGAC ]
[-] EMBL CD076061 [ GAATATATTTCACTTTAAANAATTATTGAATGATAAAAAAACATTAGGTCATAAATTTCACTTAATTGTTTATCCTTTTTTTCGTGAATAGGATTACATGTGTTGTGGACGATTTGTTTAAGCATTCTTAATTCTAACTTGAAACAATGATGGATTATTATTATTATTATTTCTAATAATGAGTGTTTTGTTTACATTAGTTTACTAATTGACTCCAATAATGATTCAATCCCCCTCCCAAAGAGTAAATACATATTTTCAAAATCAAAAGTATTTGTGGCTTTCTT TTCATAT TTGTCATTCTTTTATTTTGAATACAGGAATAACTTGAAGTATATATATATGCATTTTTCCTCCTTATCCTTCCTAATTAACTGACTACATTATTATTATTGATTTATCTATTCATCCTAGGCTAATAATTTTCTTCATAACGATTCCAAAATGTTATAACTTGTCTATGTGTTAATGGTTTTATTGTGATAATCTTCTTTTGCTGTTATAAGTAGGATATGTGTACTTAATTAATCGGTTTGTATGAATGAATTTTCCGATACATGTATGTGTGGTTTTGATGTCAGTTTAATAAATCTC ]
[-] EMBL CD160075 [ CTTTAAAAAATAATGGAATGATAAAAAAACATTAGGTCATAAAGTTCACTTAATAGTTAATCCTTTTTTTCGTGAATAGGATTACATGTGTTGTGGACGATTTGTTTAAGCATTCTTAATTCTAACTTGAAACAATGATGGATTATTATTATTATGATTTCTAATAATGAGTGTTTTGTTTACATTAGTTTACTAATTGACTCCAATAATGATTCAATCCCCCTCCCAAAGAGTAAATACATATTTTCAAAATCAAAAGTATTTGTGGCTTTCTTATTCATATGTTGTCATTCTCTTATTTTGAATACAGGAATAACTTGAAGTATATATATATGCATTT ]
consensusID : consensus_9593#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence
[CTCGAGGCCAANAATTCGGCACGAGGATAATAATAATAATAATAATAATAACAATAATAATAATAATAATAGTCTACACCATCTATCAAACTTAACACCACTTGACACAACAAGTTCATCTAGCACAACGTCGATCAATGTCGACAGTACTCATTCCGCTGTATCCAAATGTTGTAGTGGACGTCTGTTATTAAGAGATAAATTACTGCGCCAAAGTACTCAATAGTTGAACAAACAAGTGATTGAATTCAGTTCTTAATTCTTGTTTGGTTGTGCAGTTTGTCTCCATGTTATTGATTAATGGATCATTGAAACTATCTACCTGAATGTAATCAGATCATTCTTTTTGCTCATCTTTTCTTTTTTTTATAAAAAAAAAATGGAAATTTGTGTTTAATGTTTCATTAACTGCAGTACGAATTATTCCCTAATTTATTTATTTATATAAAGTGTATTGTCCACTTATGATGCATTTGATGATAGTAATGATAATGAGAACGATTTCATTTGACAGTGATGATGATTATTATCATAATAAAACGTTGATGTATTGAAATGTGAAATGTCTGTTTAATTATCAGAATATCTATTGTGATTATGATTAACTNTTATCTTCTTTGATCAACGAACACACTCAAGAAGAATTGCATTTACAAGTAATATCTATTGTAAATATCAATANCCACACCAACATGCGTTACC]
[+] EMBL CD082462 [CTCGAGGCCAANAATTCGGCACGAGGATAATAATAATAATAATAATAATAACAATAATAATAATAATAATAGTCTACACCATCTATCAAACTTAACACCACTTGACACAACAAGTTCATCTAGCACAACGTCGATCAATGTCGACAGTACTCATTCCGCTGTATCCAAATGTTGTAGTGGACGTCTGTTATTAAGAGATAAATTACTGCGCCAAAGTACTCAATAGTTGAACAAACAAGTGATTGAATTCAGTTCTTAATTCTTGTTTGGTTGTGCAGTTTGTCTCCATGTTATTGATTAATGGATCATTGAAACTATCTACCTGAATGTAATCAGATCATTCTTTTTGCTCATCTTTTCTTTTTTTTATAAAAAAAAAATGGAAATTTGTGTTTAATGTTTCATTAACTGCAGTACGAATTATTCCCTAATTTATTTATTTATATAAAGTGTATTGTCCACTTATGATGCATTTGATGATAGTAATGATAATGAGAACGATTTCATTTGACAGTGATGATGATTATTATCATAATAAAACGTTGATGTATTGAAATGTGAAATGTCTGTTTAATTATCAGAATATCTATTGTGATTATGATTAACTNTTATCTTCTTTGATCAACGAACACACTCAAGAAGAATTGCATTTACAAGTAATATCTATTGTAAATATCAATANCCACACCAACATGCGTTACC]
consensusID : consensus_9593#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence
[TGCTTTAAGTTAGGCTGTTTGTAGGTTTTTTTTTACTCCAGATCCTACCTAGTTTTCATAATCACAAATGCATGGTGATATCAAAGTTGGATGTTAATTTCTTCTAACATATTCAACTAAACAGTTTGTTATAAATTGTTTACTTTAGTGATGTCCTTTATTATATAAAATAACGGTTTGAAAAACCACTATAAATTTATAAAGTAGCAATTACCTATCTTCCTGTAGTTTGAGTCGAAAATAAATATCTCCTGATATATATTTTACATATAGATGGTTTATGCCCATGTTGTCGCGTAAGGACTCCGAAAGACTACTACTACTGGAAGGCAACGCTCAAGGCGTATTTTTAGTACGTGAAAGTGAAACCAGCCAAGGTAAGACAACTATAAAAACTTATTGAACAAAAATTTCATATATTATTTCATGATTTGAGTAACTTCTGGTAAGCTTTTCAGCAATAAATTTGTTTTTTTCATAAGTCTTAAAACTATTCTAGGTATTCCCTTTAAGAATTATAAAACTTATTAAGCATGTATTATAATATAAGTGCCTACAG]
[-] EMBL CD146965 [TGCTTTAAGTTAGGCTGTTTGTAGGTTTTTTTTTACTCCAGATCCTACCTAGTTTTCATAATCACAAATGCATGGTGATATCAAAGTTGGATGTTAATTTCTTCTAACATATTCAACTAAACAGTTTGTTATAAATTGTTTACTTTAGTGATGTCCTTTATTATATAAAATAACGGTTTGAAAAACCACTATAAATTTATAAAGTAGCAATTACCTATCTTCCTGTAGTTTGAGTCGAAAATAAATATCTCCTGATATATATTTTACATATAGATGGTTTATGCCCATGTTGTCGCGTAAGGACTCCGAAAGACTACTACTACTGGAAGGCAACGCTCAAGGCGTATTTTTAGTACGTGAAAGTGAAACCAGCCAAGGTAAGACAACTATAAAAACTTATTGAACAAAAATTTCATATATTATTTCATGATTTGAGTAACTTCTGGTAAGCTTTTCAGCAATAAATTTGTTTTTTTCATAAGTCTTAAAACTATTCTAGGTATTCCCTTTAAGAATTATAAAACTTATTAAGCATGTATTATAATATAAGTGCCTACAG]
consensusID : consensus_9593#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 340 fasta sequence
[ACTGATATTTTGCGTCAATCTTAAACTCCTCCATTTTACCTTACATATATGGCACTTGTCCCTATTCCCCACTGATAACAACCATAATTGTTATTCATAGAGTCACTCCAAACAAATGGCTGCTGATTGGAAAAGGATAATCACGTTGTACCACAAAATTTTTGTAAGTGGGGACACATATATTTTCTATGTATGGATCAGTTTACTATCCATTTCTAATTATTTAAATGTCTTTCTGATTGGTCCTTATTCTTTATCATAATAGATTGCTAATGGAATAGCTTATTTGGAGAAGGAGCACTATATTCATCGTGATTTGGCCGCGCGTAATATTTTAGTT]
[+] EMBL CD145701 [ACTGATATTTTGCGTCAATCTTAAACTCCTCCATTTTACCTTACATATATGGCACTTGTCCCTATTCCCCACTGATAACAACCATAATTGTTATTCATAGAGTCACTCCAAACAAATGGCTGCTGATTGGAAAAGGATAATCACGTTGTACCACAAAATTTTTGTAAGTGGGGACACATATATTTTCTATGTATGGATCAGTTTACTATCCATTTCTAATTATTTAAATGTCTTTCTGATTGGTCCTTATTCTTTATCATAATAGATTGCTAATGGAATAGCTTATTTGGAGAAGGAGCACTATATTCATCGTGATTTGGCCGCGCGTAATATTTTAGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9593#0 AAGTGAAGTCCTTGAAATGCGTCTGTTTATTGGAGGTTATGGGGAATTGTTTCCAAGGAA 60
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TAGTTATATCGATGTTTGTAAGGGATAGAGCGTTCACTTTTGGACACGGTGAGATAAGCA 120
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ACAGCGTTGGCGTTAAAGCCTCACGGCCAATGGATGATGTCAGTCCTTTCCTACCGTCCA 180
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GATCCTTGTCCAGCAAAGCTAGAGTTTCTGAAACTTTTCAAAACAGTCCGCCTTTGGTTA 240
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GGTGTGTGAAATCCAAGCCGCAGTCATGTCAACCTACAAATCCTACATCAAACTTGGCGA 300
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TAAGTCCTTCTCATCCTTCTGAAACACAAACTGTAACAACTTCCAAGATTAGTGGTAGAA 360
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GTGTTAAGCAGTTAAAACCTAAACATTACGTTGCATTATTCGATTATAATGCTCGAACGG 420
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AGGAGGAAACATTTCTTTCCAGAAGAGATGAAGTTTTACTGTTAGCTGACACGGATTCAG 480
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AATGGTGGCTTGTACAGAACTTAAGTTCCGGTAGGAAAGGATATGTTCCAAGCTCGTTTG 540
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTGCGAAAAAAGGATCAGTTGAGGCTGAAGAATGGTTTATGCCCATGTTGTCGCGTAAGG 600
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ACTCCGAAAGACTACTACTACTGGAAGGCAACGCTCAAGGCGTATTTTTAGTACGTGAAA 660
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GTGAAACCAGCCAAGGTTCCCTAACATTATCTGTACGAGATGAAGAACGTGGATTATCCG 720
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GTATTATGAATACAGTGAAACACTATCGTATCAAGCATCCGGATTATCGCTATTACTATA 780
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTACAACCAAATGTAGTTTTTCTAGTCTTCAAGAATTAATACAATTTTACTCAATTGATT 840
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 CTCATGGTTTGTGTTGTAAACTTACAAGGGCATGTCTATGTCCACCACCAATAACTTCAG 900
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ATTTATCAGTTAAAACAAAAGATCATTGGGAAATATCTAAATCTTCAATTGTTTTAATTG 960
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AAAAACTTGGAGCTGGACAATTTGGTGAAGTTTGGAAAGGTACTTGGAATGGTACTACAG 1020
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AAGTTGCTGTAAAAACTCTAAAACAAGGTACAATGACCAAGGAGGATTTTCTAAAAGAAG 1080
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 CTCGTATTATGCGTGCAGCTCAACACCCGAAATTAGTTCGATTATATGCTGTATGCACAG 1140
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AAGATCCTATTTATATTGTTACTGAATTAATGTGTAATGGTAGTCTACTACAATATCTTC 1200
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GTGATGGACCTGGAAAAAATTTACTGATTAATCAATTGGTTGATATGATGGCTCAGATTG 1260
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 CTAATGGAATGGCTTATTTGGAGAAGGAGCACTATATTCATCGTGATTTGGCCGCGCGTA 1320
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ATATTTTAGTTGGGGAAAATAATTGTGTTAAAGTGGCTGATTTTGGTTTAGCTCGTATGG 1380
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TGGAAGATCACTACTGTACATATATGGCGCAGAAAAGTACAAAATTCCCAATTAAATGGA 1440
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 CAGCACCAGAGGCTGCATTAATGGGTCGTTTTACAATAAAATCAGATGTCTGGTCATTTG 1500
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 GTATTGTCATTTACGAATTAATTACACTAGGTCAAGTTCCTTACCCATCAATGAATAACA 1560
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 CAGAGACATTGCATCAAGTTAGTACTGGTTATCGCATGCCACGTCCAGTGAATTGTCCAC 1620
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AACCAATTTATGATATGTTATTACGAATATGGGATAGCTGTCCAGAAAAACGTCCTACAT 1680
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TCTCATCTCTGTTTGAATTTTTCGAAGATTATTTTGTCACTTCTGATGCTAATTATAAAC 1740
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ATGCTAATTCAGCATTAACTGGATGTAGTGCTTGTATCACAACAGT--TAATAATAATAA 1798
consensus_9593#1 ------------------CTCGAGGCCAANAATTCGGCACGAGGATAATAATAATAATAA 42
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------TGCTTTAAGTTA 12
consensus_9593#0 TAATAATAACAATAATAATAATAATAATAGTCTACACCATCTATCAAACTTAACACCACT 1858
consensus_9593#1 TAATAATAACAATAATAATAATAATAATAGTCTACACCATCTATCAAACTTAACACCACT 102
consensus_9593#3 ---------------------------------------------------ACTGATATT 9
consensus_9593#2 GGCTGTTTGTAGGTTTTTTTTTACTCCAGATCCTACCTAGTTTTCATAATCACAAATGCA 72
*
consensus_9593#0 TGAC-ACAACAAGTTCATCTAGCACAACGTCGATCAATGTCGACAG-TACTCATTCCGCT 1916
consensus_9593#1 TGAC-ACAACAAGTTCATCTAGCACAACGTCGATCAATGTCGACAG-TACTCATTCCGCT 160
consensus_9593#3 T--T-GCGTCAATCTTAAACTCCTCCATTTTACCTTACATATATGG-CACTTGTCCC--T 63
consensus_9593#2 TGGTGATATCAAAGTTGGATG--TTAATTTCTTCTAACATATTCAACTAAACAGTTTGTT 130
* *** * * * * * * *
consensus_9593#0 GTATCCAAATGTTGTAGTGGACGTCTGTTATTAAGAGATAAATTACTGCGCCAAAGTACT 1976
consensus_9593#1 GTATCCAAATGTTGTAGTGGACGTCTGTTATTAAGAGATAAATTACTGCGCCAAAGTACT 220
consensus_9593#3 ATTCCCCACTGATAACAACCATAATTGTTATTCATAGA---GTCACTCCAAACAAATGGC 120
consensus_9593#2 ATAAATTGTTTACTTTAGTGATGTCCTTTATTATATAA--AATAACGGTTTGAAAAACCA 188
* * * ***** * * ** **
consensus_9593#0 CAATAGTTGAACAAACAAGTGATTGAATTCAGTTCTTAATTCTTGTTTGGTTGTGCA-GT 2035
consensus_9593#1 CAATAGTTGAACAAACAAGTGATTGAATTCAGTTCTTAATTCTTGTTTGGTTGTGCA-GT 279
consensus_9593#3 TGCTGATTGGAAAA--GGATAATCACGTTGTACCACAAAATTTTTGTAAGTGGGGAC-AC 177
consensus_9593#2 CTATAAATTTATAAAGTAGCAATTACCTATCTTCCTGTAGTTTGAGTCGAAAATAAATAT 248
* * * ** ** * * * * *
consensus_9593#0 TTGTCTCCATGTTATTGATTAATGGATCATTGAAACTATGTACCTGAATGTAATCAGATC 2095
consensus_9593#1 TTGTCTCCATGTTATTGATTAATGGATCATTGAAACTATCTACCTGAATGTAATCAGATC 339
consensus_9593#3 AT------ATATTTTCTATGTATGGATCAGTTTA-CTATCCATTTCTAATTATTTAAAT- 229
consensus_9593#2 CTCCTGATATATATTTTACATATAGATGGTT---------TATGCCCATGTTGTCGCGTA 299
* ** * * * ** *** * * * * * *
consensus_9593#0 ATTCTTTTTGCTCATCTTTTCTTTTTTTTATAAAAAAAAAATGGAAATTTGTGTTTAATG 2155
consensus_9593#1 ATTCTTTTTGCTCATCTTTTCTTTTTTTTATAAAAAAAAAATGGAAATTTGTGTTTAATG 399
consensus_9593#3 GTCTTTCTGATTGGTCCTTATTCTTTATCATAATAGATTGCTAATGG---------AATA 280
consensus_9593#2 AGGACTCCGAAAGACTACTACT----ACTGGAAGGCAACGCTCAAGGC--------GTAT 347
* * * ** * *
consensus_9593#0 TTTCATTAACTGCAGTACGAATTATTCCCTAATTTATTTATTTATATAAAGTGTATTGTC 2215
consensus_9593#1 TTTCATTAACTGCAGTACGAATTATTCCCTAATTTATTTATTTATATAAAGTGTATTGTC 459
consensus_9593#3 GCTTATTTGGAGAAGGA-GCACTATATTCATCGTGATTTGGCCGCGCGTAATATTTTAGT 339
consensus_9593#2 TTTTAGTACGTGAAAGTGAAACCAG--CCAAGGTAAGACAACTATA-AAAACTTATTGAA 404
* * * * * * * * * * * * **
consensus_9593#0 CACTTATGATGCATTTGATGATAGTAATGATAATGAGAACGATTTCATTTGACAGTGATG 2275
consensus_9593#1 CACTTATGATGCATTTGATGATAGTAATGATAATGAGAACGATTTCATTTGACAGTGATG 519
consensus_9593#3 T----------------------------------------------------------- 340
consensus_9593#2 CAAAAATTTCATATATTATT-TCATGATTTGAGTAACTTCTGGTAAGCTTTTCAGCAATA 463
consensus_9593#0 ATGATTATTATCATAATAAAACGTTGATGTATTGAAATGTGAAATGTCTGTTTAATTATC 2335
consensus_9593#1 ATGATTATTATCATAATAAAACGTTGATGTATTGAAATGTGAAATGTCTGTTTAATTATC 579
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 A-ATTTGTTTTTTTCATAAGTCTTAAAACTATTC-----TAGGTATTCCCTTTAAGAATT 517
consensus_9593#0 AGAATATCTATTGTGATTATGATTAACTTTTATCTTCTTTGATCAACGAACACACTCAAG 2395
consensus_9593#1 AGAATATCTATTGTGATTATGATTAACTNTTATCTTCTTTGATCAACGAACACACTCAAG 639
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ATAAAACTTATTAAGCATGTATTATAATATAAGTGCCTACAG------------------ 559
consensus_9593#0 AAGAATTGCATTTACAAGTAATATCTATTGTAAATATCAATACAACAACCAACATGCGTT 2455
consensus_9593#1 AAGAATTGCATTTACAAGTAATATCTATTGTAAATATCAATANCCACACCAACATGCGTT 699
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ACCGTAACTCAGGGTTTTGAACAATGCATTTCATTGTCTTTTTTTTTATTTGTTTAAGCA 2515
consensus_9593#1 ACC--------------------------------------------------------- 702
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TATACTCTTTGTTGTTTTTTTTCTCCCATTCATCATAAAGTATTTCTCATTATTTCTGTT 2575
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TATCTTACTCTAATTCTCTTCTTAATTGTATTCCTTCAATCATTCATACCTTTTTATTTA 2635
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TGACTTGTAAATTTATATTATAATATTAATTTCTATGGTGATTGTATTGTGTAACTGACT 2695
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTTCATTGACTTATTATGCAATTCCGTGATTCATTCCTTCTCCTCTTTTCTGGAATATAT 2755
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTCACTTTAAAAAATTATTGAATGATAAAAAAACATTAGGTCATAAATTTCACTTAATTG 2815
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTTATCCTTTTTTTCGTGAATAGGATTACATGTGTTGTGGACGATTTGTTTAAGCATTCT 2875
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TAATTCTAACTTGAAACAATGATGGATTATTATTATTATTATTTCTAATAATGAGTGTTT 2935
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TGTTTACATTAGTTTACTAATTGACTCCAATAATGATTCAATCCCCCTCCCAAAGAGTAA 2995
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 ATACATATTTTCAAAATCAAAAGTATTTGTGGCTTTCTTTTCATATTTGTCATTCTTTTA 3055
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTTTGAATACAGGAATAACTTGAAGTATATATATATGCATTTTTCCTCCTTATCCTTCCT 3115
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AATTAACTGACTACATTATTATTATTGATTTATCTATTCATCCTAGGCTAATAATTTTCT 3175
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TCATAACGATTCCAAAATGTTATAACTTGTCTATGTGTTAATGGTTTTATTGTGATAATC 3235
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTCTTTTGCTGTTATAAGTAGGATATGTGTACTTAATTAATCGGTTTGTATGAATGAATT 3295
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 TTCCGATACATGTATGTGTGGTTTTGATGTCAGTTTAATAAATCTCCGTCTCTACAACAA 3355
consensus_9593#1 ------------------------------------------------------------
consensus_9593#3 ------------------------------------------------------------
consensus_9593#2 ------------------------------------------------------------
consensus_9593#0 AAAAAA 3361
consensus_9593#1 ------
consensus_9593#3 ------
consensus_9593#2 ------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||