These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9600#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 396 fasta sequence [CAATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATAA] [+] EMBL CD122738 [CAATGAACCGGGAGCCCAAATCGTCGCCCATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAGAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCGATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATA ] [+] EMBL CD123021 [CAATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTCGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCGATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATA ] [+] EMBL CD123064 [CAATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCGATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATA ] [+] EMBL CD122820 [CAATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATA ] [+] EMBL CD123180 [CAATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATA ] [+] EMBL CD122714 [CAATAAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTGTCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATA ] [-] EMBL CD123087 [ AATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATCGGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCGATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATAA] [-] EMBL CD122780 [ AATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGCCACGATACCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATAA] [-] EMBL CD123113 [ AATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTAATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGGTGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAAAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATAA] [-] EMBL CD123053 [ AATGAACCGGGAGCCCAAATCGTCGCCTATGTGCCAAAAGGTGTGAATGTGTTGATGCGAAAATCGCTTATTTAACGGTGGAGGGAGAGAGGAGCAGTGAAACAGCTTTACGGAGTGATTGGTTGTCCGATTCACCATTCGCTATCGCCGTTTATGCATAACGATGCGTTTCAGCAGCTTGGAATCGATGCGCATTATCATGCGTTCCATGTCGAAAGAGAGAAGTTGCCAGCGGCGATCCAAGGAATAAAAGCGCTTGGCATCGCAGGCGTAAACGTCACGATTCCACATAAAACGGCGGTCATTCCGTTTTTGGACGAGATCAATGAAATGGCAAGGCGAATTGGTGCGGTCAATACGATTGTCAATGAAAATGGTCGCTTAATCGGCTATAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||