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Schistosoma mansoni
cluster # 9657 cluster # 9657       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9657#0 length = 800 sequences # 10  

consensusID : consensus_9657#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 800
fasta sequence
                              [ATCTCGTACAATGCTTCAG-AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACTTAGTTCCTTCCAGAACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGCTTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTTAATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGTTTTGGCCTAATGCAGTAACATGAGTTTGNNTGG]

[+] EMBL CD089651             [ATCTCGTACAATGCTTCAGAAGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATC                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD089792             [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCC                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD089765             [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAATATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD089764             [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD089776             [ TCTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCA                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD089803             [  CTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCAT                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD089845             [  CTCGTACAATGCTTCAG AGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATATACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTGCAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGCACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCAT                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD183616             [                                                                                                                                                                                                                    CATCCAAACTCGGCTGGGAAAGTTATTCAAGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTACAAAACATTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTCAGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACT                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD068315             [                                                                                                                                                                                                                                                                                                                                                                               TGGTGTCCTATGTGACAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGTGCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTTACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAATTTAGTTCCTTCCAGAACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGCTTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTTAATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGT                                 ]
[-] EMBL CD062706             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATTTCTCCATATATTAAAGAAAGCATGTCAACGAAATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTTGGGATGAGTTAATTTCTCGCATTCCCTCGGCTCCATGTTCACCTCAATCTGTTTTGTTTTGGCCTAATGCAGTAACATGAGTTTGNNTGG]


>consensus_9657#0 ATCTCGTACAATGCTTCAGAGTCAAAAGCACAATTCAGTTGCTAACGGGTCGTCCAATAT ACCCGATGGGACTAGTTATTCTAATTCGTGCTCTGGTAACCAAATAAATTCTGTTTGTTG CAACTCTACTGGTGATTGTTTCGCCTCCCTCGCTCCTCATACGGGAAAGCTTTTGGCAGC ACTCTTGTCTGCTCTTCCTGGTGCTTGTCGCCATCCAAACTCGGCTGGGAAAGTTATTCA AGAGGAAATGGCCAAAACTTTAGCCAGTCTTTTGCGATTTGCCAAAGAGACTAGTGTTAC AAAACTTTTCAACCGTGTGCGTTCGTGGTACTTACAACCAGAACAAGCTACGGCCGGTTC AGATGGTGGTGTACAAGGTGGCAGTAACATTTCAATAAGCCATTGGGCATGTGTTCGTGT GCTACATGCTGTTGCTCATCATTGTCCTGATCTCCTATACGCTCATGCTTGTATTACTTT ACCACTGATTTTCTTAAGCAAACAGGTTGAAAGCGAGGTTGAAAACTTAGTTCCTTCCAG AACAAGTAGTGCTATTTTTCACTCGAAAAATCGTAATATTGATATCAATTCTCTTTCTGC TTCTCATCGCGAAACAAATACAAGTATTTCTCCATATATTAAAGCACGCATGTCAACGAA ATTGAATCCCAGTGATCTAGAGATTTACCAACAGTTGTGGCGGGAGTGTCGGGATGAGTT AATTTCTCGCATTCCCTCGGATCCATGTTCACCTCAATCTGTTTAGTTTTGGCCTAATGC AGTAACATGAGTTTGNNTGG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)