These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 663 fasta sequence [GGACGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTGNTTTCGAACCAAAAAAAGAAGTAAGTGAGAAAACTTTTGACAGAGTCCGATTGCGACAACAAAGATTCTATTGAGTTCTCGGACTTTCTGAGAATGATGTCTGTAAAAATGCAAGACAAAGATGCAAAAGAAGAGATGTTAAAAGCCTTTCGTCTTTTTGACGATGATGAAACTGGGAAAATATCTTTCAAAAACCTTAAGCGTGTGGCGAAAGAACTTGGTGAAAATCTTACTGACGAGGAGTTGCAAGAAATGATTGATGAGGCTGATCGCGATGGTGATGGTGAAGTCAACGAACAAGAATTTCTTCGGATCATGAAAAAAACAAATCTTTATTAGACCTTATTGATGTATATATATTTCCTAAGAACTAACTGTAATTTAAACCGATTACATAAATTTCTACTCCGCAATAATGCTTAAAAATAAGAACTACCTGAAATAAAAAAAAA] [+] EMBL CD133931 [GGACGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL CD131440 [ ACGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL CD185287 [ CGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL CD185407 [ CGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL CD131342 [ CGACTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAGGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAGGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL CD131598 [ CGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL CD131580 [ CGATTTGATTGTGCTTTTATGTCGACAGTTACAAAAAGACCGTCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTG ] [+] EMBL SMAA69077 [ aGCTTTTATGTCGACAGTTAC AAAAGACCATCTCAGCAGCCATCTGGAAAAAAGAAGGAGATCGCGAGTCGTGGTGTTAAACATGAACTTACAGAAGACCAAAAACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTNNTTTCGAACCAAAAAAAGAAGTAAGTGAGAAAACTTTTGACAG ] [+] EMBL CD131464 [ ACAAGAAATCCGTGAAGCATTTGACCTTTTTGACACTGATAAATCAGGAACAATCGATATCAAAGAGTTAAAAGTTGCTATGCGGGCTCTTGGTTTCGAACCAAAAAAAGAAG AAGTGAGAAAACTTTTGACAGAGTCCGATTGCGACAACAAAGATTCTATTGAGTTCTCGGACTTTCTGAGAATGATGTCTGTAAAAATGCAAGACAAAGATGCAAAAGAAGAGATGTTAAAAGCCTTTCGTCTTTTTGACGATGATGAAACTGGGAAAATATCTTTCAAAAACCTTAAGCGTGTGGCGAAAGAACTTGGTGAAAATCTTACTGACGAGGAGTTGCAAGAAATGATTGATGAGGCTGATCGCGATGGTGATGGTGAAGTCAACGAACAAGAATTTCT ] [+] EMBL CD134912 [ TGATGTCTGTAAAAATGCAAGACAAAGATGCAAAAGAAGAGATGTTAAAAGCCTTTCGTCTTTTTGACGATGATGAAACTGGGAAAATATCTTTCAAAAACCTTAAGCGTGTGGCGAAAGAACTTGGTGAAAATCTTACTGACAAGGAGTTGCAAGAAATGATTGATGAGGCTGATCGCGATGGTGATGGTGAAGTCAACGAACAAGAATTTCTTCGGATCATGAAAAAAACAAATCTTTATT ] [-] EMBL SMAA69064 [ TCAAAAACCTTAAGCGTGTGGCGAAAGAACTTGGTGAAAATCTTACTGACGNGGAGTTGCAAGAAATGATTGATGAGGCTGATCGCGATGGTGATGGTGAAGTCAACGAACAAGAATTTCTTCGGATCATGAAAAAAACAAATCTTTATTAGACCTTATTGATGTATATATATTTCCTAAGAACTAACTGTAATTTAAACCGATTACATAAATTTCTACTCCGCAATAATGCTTAAAAATAAGAACTACCTGAAATAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||