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Schistosoma mansoni
cluster # 9699 cluster # 9699       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9699#0 length = 870 sequences # 3  
consensus_9699#1 length = 795 sequences # 3  
consensus_9699#2 length = 728 sequences # 1  
consensus_9699#3 length = 486 sequences # 3  
consensus_9699#4 length = 292 sequences # 1  

consensusID : consensus_9699#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 870
fasta sequence
                              [TGTATTTATTG-AGGAGAATTAACAGTGGCACGGTATGTTGTACTCACAACGG-AAGGAAAGTGTGTTACAAGCGTTCAATGTAATACAGTTAAACAACAAGTACAATTGTTTAATGCTTAATGTACAGAATATGAAAATACATGCGATAACTATGAAAAATTATTTACAAAATAGGTTTTTAAGGTTCTATCTCCACATAGCTCCCCCCAGAGTGTCCGGAGGTAACACTGATTACAATATGAACAACAAAAATTGAGAAATATTGTATACAAATGTACATAAAATAGTATTTACTGTAATAACGGAAAAAAAAAATGGTGGAGATAGGAATAAATGGCGCGTTAATAGTATACGCTATGCTACGCAAAATGAAACTGAAGAACAAACATTACAAAGTTTCGGTTTGGTACTAATAATAATAAAATGTGCAAAACTGTTAATAGTCATAAAAAAAAATGGATGAATTTAATAAATAGTTAGTTAGCATTCACTCGTTTATTACTATAACAATTTTTTCTTATTAAAAAAAAAATTGGCAAAACCAGTGATAACAAATAAATGTAGTTATTAAATGTACATGTAGGGAAAATAAATATCTTTTATTAGAAGATTGCGTAACTTCACAAAGTAATGCATACAACTGATTGATTGTGTTAGTCCATAAAATGTACATAACGTTTGGGTTTTTTAATAAGTCTCCCAGATCGTGTTAAACAAGAGGGTGTAGTGCTGAGTTTTTCCTCTTCCTCTTGTTTCTTAACAATTGATGGGAGTGATTGTTTGTTCGCCGTATTGTCATCAGTGGCTTGAGGGGGTTCGTAGAAAGCTGGTTAATTCGGTCTATGCCTCGTGCCGAATTCTTGCCTCGAG]

[+] EMBL CD077264             [TGTATTTATTG AGGAGAATTAACAGTGGCACGGTATGTTGTACTCACAACGG AAGGAAAGTGTGTTACAAGCGTTCAATGTAATACAGTTAAACAACAAGTACAATTGTTTAATGCTTAATGTACAGAATATGAAAATACATGCGATAACTATGAAAAATTATTTACAAAATAGGTTTTTAAGGTTCTATCTCCACATAGCTCCCCCCAGAGTGTCCGGAGGTAACACTGATTACAATATGAACAACAAAAATTGAGAAATATTGTATACAAATGTACATAAAATAGTATTTACTGTAATAACGGAAAAAAAAAATGGTGGAGATAGGAATAAATGGCGCGTTAATAGTATACGCTATGCTACGCAAAATGAAACTGAAGAACAAACATTACAAAGTTTCGGTTTGGTACTAATAATAATAAAATGTGCAAAACTGTTAATAGTCATAAAAAAAAATGGATGAATTTAATAAATAGTTAGTTAGCATTCACTCGTTTATTACTATAACAATTTTTTCTTATTAAAAAAAAAATTGGCAAAACCAGTGATAACAAATA                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD077226             [TGTATTTATTGCAGGAGAATTAACAGTGGCGCGGTATGTTGTACTCACAACGGTAAGGAAAGTGTGTTACAAGCGTTCAATGTAATACAGTTAAACAACAAGTACAATTGTTTAATGCTTAATGTACAGAATATGAAAATACATGCGATAACTATGAAAAATTATTTACAAAATAAGTTTTTAAAGTTCTATCTGCACATATCTCCCCCCATAGTGTTCGGAGGTAACACTGTTTACATTATGAACAACAAAAATTGATAAATATTGTATACAAATGTACATAAAATAGTATTTACTGTAATAACGGAAAAAAAAAATGGTGGAGATAGGAATAAATGGCGCGTTAATAt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD083935             [                                                                                                                                                                                                                                                                                                                                                                                                               TTCGGTTTGGTACTAATAATAATAAAATGTGCAAAACTGTTAATAGTCATAAAAAAAAATGGATGAATTTAATAAATAGTTAGTTAGCATTCACTCGTTTATTACTATAACAATTTTTTCTCATTAAAAAAAAAATTGGCAAAACCAGTGATAACAAATAAATGTAGTTATTAAATGTACATGTAGGGAAAATAAATATCTTTTATTAGAAGATTGCGTAACTTCACAAAGTAATGCATACAACTGATTGATTGTGTTAGTCCATAAAATGTACATAACGTTTGGGTTTTTTAATAAGTCTCCCAGATCGTGTTAAACAAGAGGGTGTAGTGCTGAGTTTTTCCTCTTCCTCTTGTTTCTTAACAATTGATGGGAGTGATTGTTTGTTCGCCGTATTGTCATCAGTGGCTTGAGGGGGTTCGTAGAAAGCTGGTTAATTCGGTCTATGCCTCGTGCCGAATTCTTGCCTCGAG]


>consensus_9699#0 TGTATTTATTGAGGAGAATTAACAGTGGCACGGTATGTTGTACTCACAACGGAAGGAAAG TGTGTTACAAGCGTTCAATGTAATACAGTTAAACAACAAGTACAATTGTTTAATGCTTAA TGTACAGAATATGAAAATACATGCGATAACTATGAAAAATTATTTACAAAATAGGTTTTT AAGGTTCTATCTCCACATAGCTCCCCCCAGAGTGTCCGGAGGTAACACTGATTACAATAT GAACAACAAAAATTGAGAAATATTGTATACAAATGTACATAAAATAGTATTTACTGTAAT AACGGAAAAAAAAAATGGTGGAGATAGGAATAAATGGCGCGTTAATAGTATACGCTATGC TACGCAAAATGAAACTGAAGAACAAACATTACAAAGTTTCGGTTTGGTACTAATAATAAT AAAATGTGCAAAACTGTTAATAGTCATAAAAAAAAATGGATGAATTTAATAAATAGTTAG TTAGCATTCACTCGTTTATTACTATAACAATTTTTTCTTATTAAAAAAAAAATTGGCAAA ACCAGTGATAACAAATAAATGTAGTTATTAAATGTACATGTAGGGAAAATAAATATCTTT TATTAGAAGATTGCGTAACTTCACAAAGTAATGCATACAACTGATTGATTGTGTTAGTCC ATAAAATGTACATAACGTTTGGGTTTTTTAATAAGTCTCCCAGATCGTGTTAAACAAGAG GGTGTAGTGCTGAGTTTTTCCTCTTCCTCTTGTTTCTTAACAATTGATGGGAGTGATTGT TTGTTCGCCGTATTGTCATCAGTGGCTTGAGGGGGTTCGTAGAAAGCTGGTTAATTCGGT CTATGCCTCGTGCCGAATTCTTGCCTCGAG



consensusID : consensus_9699#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 795
fasta sequence
                              [ATCCCTATCCTTGATTTGGGTTACTGGTCACATGTAATACAGAACATGATTCAGGTGGATCAGTTCAAGTTATCATACGACTAGTGCGGATAAAATCATTTCAAGACAAATTACAGGTTAGTAGAAGCAGCAACGGTGTAAGTGGTACTAGAATAAATTAGGTACACAAAAACAAGAAAAGTTAAAAGATCTCAAGATTTACACCCATGATTGTGAACGATAATGAGTCACATCACCAAAAGTCTTTAACCAGTGGTTTTATAATAATCACAACGATACCAACTACATCGACTACACCTATTACCGTAGTTCAGTTCAATTGTCTACAAATTCGTACATTGGTTCCATGTCTTGCTTTGACTACTCCTAGCTTTTTTCAGCCTACTCACACACTACACAACATCATCTGTCAAGATAGATGATGCTTGTGCAAACATCTACGAGGAACCCTTAGAAGACGTTCATGATCGAATACTGTGGTGTGGTCTACTTATATCCATATAAGTAGTACATGGTGTGGGTCAGACATAGAATGTATTTTGGGAGAAGACCGATGAGGAAAGAACCGAAATGAAACGCAAACGTCTGGAAAATGTGTGAGCAATGGAATAATAGAAGAAACAGTGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTCTGTAATGTTGCTTAAATACATTCGATTATCCCCAACCGGTGTTTCGTTCGCTACAATACTAGTAAAGTACAAATATCCTATTTCCATAATTGCT]

[+] EMBL CD161465             [ATCCCTATCCTTGATTTGGGTTACTGGTCACATGTAATACAGAACATGATTCAGGTGGATCAGTTCAAGTTATCATACGACTAGTGCGGATAAAATCATTTCAAGACAAATTACAGGTTAGTAGAAGCAGCAACGGTGTAAGTGGTACTAGAATAAATTAGGTACACAAAAACAAGAAAAGTTAAAAGATCTCAAGATTTACACCCATGATTGTGAACGATAATGAGTCACATCACCAAAAGTCTTTAACCAGTGGTTTTATAATAATCACAACGATAACAACTACATCGACTACACCTATTACCGTAGTTCAGTTCAATTGTCTACAAATTCGTACATTGGTTCCATGTCTTGCTTTGACTACTCCTAGCTTTTTTCAGCCTACTCACACACTACACAAC                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD066160             [                                                                                                                                                                                                                                                       AACCAGTGGTTTTATAATAATCACAACGATACCAACTACATCGACTACACCTATTACCGTAGTTCAGTTCAATTGTCTACAAATTCGTACATTGGTTCCATGTCTTGCTTTGACTACTCCTAGCTTTTTTCAGCCTACTCACACACTACACAACATCATCTGTCAAGATAGATGATGCTTGTGCAAACATCTACGAGGAACCCTTAGAAGACGTTCATGATCGAATACTGTGGTGTGGTCTACTTATATCCATATAAGTAGTACATGGTGTGGGTCAGACATAGAATGTATTTTGGGAGAAGACCGATGAGGAAAGAACCGAAATGAAACGCAAACGTCTGGAAAATGTGTGAGCAATGGAATAATAGAAGAAACAGTGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTCTGTAATGTTGCTTAAATACATTCGATTATCCCCAACCGGTGTTTCGTTCGCTACAATACTAGTAAAGTACAAATATCCTATTTCCATAATTGCT]
[-] EMBL CD066184             [                                                                                                                                                                                                                                                       AACCAGTGGTTTTATAATAATCACAACGATACCAACTACATCGACTACACCTATTACCGTAGTTCAGTTCAATTGTCTACAAATTCGTACATTGGTTCCATGTCTTGCTTTGACTACTCCTAGCTTTTTTCAGCCTACTCACACACTACACAACATCATCTGTCAAGATAGATGATGCTTGTGCAAACATCTACGAGGAACCCTTAGAAGACGTTCATGATCGAATACTGTGGTGTGGTCTACTTATATCCATATAAGTAGTACATGGTGTGGGTCAGACATAGAATGTATTTTGGGAGAAGACCGATGAGGAAAGAACCGAAATGAAACGCAAACGTCTGGAAAATGTGTGAGCAATGGAATAATAGAAGAAACAGTGAAGATTGAAACAATTGGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTCTGTAATGTTGCTTAAATACATTCGATTATCCCCAACCGGTGTTTCGTTCGCTACAATACTAGTAAAGTACAAATATCCTATTTCCATAATTGCT]


>consensus_9699#1 ATCCCTATCCTTGATTTGGGTTACTGGTCACATGTAATACAGAACATGATTCAGGTGGAT CAGTTCAAGTTATCATACGACTAGTGCGGATAAAATCATTTCAAGACAAATTACAGGTTA GTAGAAGCAGCAACGGTGTAAGTGGTACTAGAATAAATTAGGTACACAAAAACAAGAAAA GTTAAAAGATCTCAAGATTTACACCCATGATTGTGAACGATAATGAGTCACATCACCAAA AGTCTTTAACCAGTGGTTTTATAATAATCACAACGATACCAACTACATCGACTACACCTA TTACCGTAGTTCAGTTCAATTGTCTACAAATTCGTACATTGGTTCCATGTCTTGCTTTGA CTACTCCTAGCTTTTTTCAGCCTACTCACACACTACACAACATCATCTGTCAAGATAGAT GATGCTTGTGCAAACATCTACGAGGAACCCTTAGAAGACGTTCATGATCGAATACTGTGG TGTGGTCTACTTATATCCATATAAGTAGTACATGGTGTGGGTCAGACATAGAATGTATTT TGGGAGAAGACCGATGAGGAAAGAACCGAAATGAAACGCAAACGTCTGGAAAATGTGTGA GCAATGGAATAATAGAAGAAACAGTGAAGATTGAAACAATTGGTTGTTAATTTGCAAATT GACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTCTGTAATGTTGCTTAAATAC ATTCGATTATCCCCAACCGGTGTTTCGTTCGCTACAATACTAGTAAAGTACAAATATCCT ATTTCCATAATTGCT



consensusID : consensus_9699#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence
                              [TCCAGGCCAGAATTCGGCACGAGGGGAGCCAATGCTATATTGGGAGTGTCTTTGGCTGTGTGCAAAGCTGGTGCAGCTGAAGCCGGTTTACCTCTCTATAGGTATATTGCGAGGTTAGCTGGGCATGAAGATGTTATAATGCCTGTTCCAGCATTCAATGTCATTAATGGTGGCAGTCATGCCGGCAACAAGCTAGCCATGCAAGAATTTATGATTCTGCCTACTGGGGCCAGCTCTTTCACTGAAGCAATGCAAATCGGTACTGAGGTGTACCACAATTTAAAAGCTGTTATCAAACGTGAATATGGACTGGATGCATGCAACGTTGGTGACGAAGGTGGTTTTGCACCGAATATACAGGATAATATGAAAGGTCTTCAGCTGCTTGAAGAGGCCATAAAAATTGCTGGCTATACTGGGAAAGTAGAGATTGGTATGGATTGTGCGGCTTCTGAGTTCCATAAGAATGGGAAATATGATTTAGATTTCAAGAACCCTCATTCTGCAGAGTCAACCTGGCTTAGTCCTGATGCAATGGCTAATATGTACAAGCAAATGATAAGCAAATTTCCAATTGTGAGCATTGAAGATCCATTTGATCAGGATGATTGGGAAACCTGGCCCAAACTAACTTCTTCAACAAATATTCAAATTGTTGGAGACGATTTGACTGTTACCAATCCAAAGCGCATTANACAGGCCATCGCTTCAAAGGCTTGCAATTGTCT]

[+] EMBL CD079488             [TCCAGGCCAGAATTCGGCACGAGGGGAGCCAATGCTATATTGGGAGTGTCTTTGGCTGTGTGCAAAGCTGGTGCAGCTGAAGCCGGTTTACCTCTCTATAGGTATATTGCGAGGTTAGCTGGGCATGAAGATGTTATAATGCCTGTTCCAGCATTCAATGTCATTAATGGTGGCAGTCATGCCGGCAACAAGCTAGCCATGCAAGAATTTATGATTCTGCCTACTGGGGCCAGCTCTTTCACTGAAGCAATGCAAATCGGTACTGAGGTGTACCACAATTTAAAAGCTGTTATCAAACGTGAATATGGACTGGATGCATGCAACGTTGGTGACGAAGGTGGTTTTGCACCGAATATACAGGATAATATGAAAGGTCTTCAGCTGCTTGAAGAGGCCATAAAAATTGCTGGCTATACTGGGAAAGTAGAGATTGGTATGGATTGTGCGGCTTCTGAGTTCCATAAGAATGGGAAATATGATTTAGATTTCAAGAACCCTCATTCTGCAGAGTCAACCTGGCTTAGTCCTGATGCAATGGCTAATATGTACAAGCAAATGATAAGCAAATTTCCAATTGTGAGCATTGAAGATCCATTTGATCAGGATGATTGGGAAACCTGGCCCAAACTAACTTCTTCAACAAATATTCAAATTGTTGGAGACGATTTGACTGTTACCAATCCAAAGCGCATTANACAGGCCATCGCTTCAAAGGCTTGCAATTGTCT]


>consensus_9699#2 TCCAGGCCAGAATTCGGCACGAGGGGAGCCAATGCTATATTGGGAGTGTCTTTGGCTGTG TGCAAAGCTGGTGCAGCTGAAGCCGGTTTACCTCTCTATAGGTATATTGCGAGGTTAGCT GGGCATGAAGATGTTATAATGCCTGTTCCAGCATTCAATGTCATTAATGGTGGCAGTCAT GCCGGCAACAAGCTAGCCATGCAAGAATTTATGATTCTGCCTACTGGGGCCAGCTCTTTC ACTGAAGCAATGCAAATCGGTACTGAGGTGTACCACAATTTAAAAGCTGTTATCAAACGT GAATATGGACTGGATGCATGCAACGTTGGTGACGAAGGTGGTTTTGCACCGAATATACAG GATAATATGAAAGGTCTTCAGCTGCTTGAAGAGGCCATAAAAATTGCTGGCTATACTGGG AAAGTAGAGATTGGTATGGATTGTGCGGCTTCTGAGTTCCATAAGAATGGGAAATATGAT TTAGATTTCAAGAACCCTCATTCTGCAGAGTCAACCTGGCTTAGTCCTGATGCAATGGCT AATATGTACAAGCAAATGATAAGCAAATTTCCAATTGTGAGCATTGAAGATCCATTTGAT CAGGATGATTGGGAAACCTGGCCCAAACTAACTTCTTCAACAAATATTCAAATTGTTGGA GACGATTTGACTGTTACCAATCCAAAGCGCATTANACAGGCCATCGCTTCAAAGGCTTGC AATTGTCT



consensusID : consensus_9699#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 486
fasta sequence
                              [TTTAAGGTTTAGTACTGCTACCACCAACTTATAGCACTGGTTGTTTGACTTGTTGGTTTTCTACTTACATCATTACCAAGTTTTTCAGTACTATATGGTACATTAGAGCTGAAAGAAGATCCGAAAGATTGTTGAGGAGAACTAATTATCCTGGTTCCAGTAGTATGATCAGAAGCATCGAATCCTGTCGACGGTTGCTGATTCATTAGATTTGGTTTCGTAGTCGAATCCATTGGTGGTATTTTGGAAGGACTAAATAAGCCAGATGAAGAACTTTGGTTCCATGTATGCGAAGAATAATTGGTGTGTGTTGTGTTTTGCATACTGGACAGTCCCCCGATATTTGAACGGTACCCAATGTCAGGATTTTCTGAAGTCGTACTGTACCCTCGGCTCGCTGCAGTTGTCGCTGGTGTACTAAAAGAAGTTTGGTGTGGTGCATCANCTCTCGAAGATAGTGAACTAGTAGATG-AACCAAAACTTGTG]

[+] EMBL CD137842             [TTTAAGGTTTAGTACTGCTACCACCAACTTATAGCACTGGTTGTTTGACTTGTTGGTTTTCTACTTACATCATTACCAAGTTTTTCAGTACTATATGGTACATTAGAGCTGAAAGAAGATCCGAAAGATTGTTGAGGAGAACTAATTATCCTGGTTCCAGTAGTATGATCAGAAGCATCGAATCCTGTCGACGGTTGCTGATTCATTAGATTTGGTTTCGTAGTCGAATCCATTGGTGGTATTTTGGAAGGACTAAATAAGCCAGATGAAGAACTTTGGTTCCATGTATGCGAAGAATAATTGGTGTGTGTTGTGTTTTGCATACTGGACAGTCCCCCGATATTTGAACGGTACCCAATGTCAGGATTTTCTGAAGTCGTACTGTACCCTCGGCTCGCTGCAGTTGTCGCTGGTGTACTAAAAGAAGTTTGGTGTGGTGCATCANCTCTCGAAGATAGTGAACTAGTAGATG AACCAAAACTTGTG]
[+] EMBL CD142685             [                                    CTGGTTGTTTGACTTGTTGGTTTTCTACTTACATCATTACCAAGTTTTTCAGTACTATATGGTACATTAGAGCTGAAAGAAGATCCGAAAGATTGTTGAGGAGAACTAATTATCCTGGTTCCAGTAGTATGATCAGAAGCATCGATTCCTGTCGACGGTTGCTGATTCATTAGATTTGGTTTCGTAGTCGAATCCATTGGTGGTATTTTGGAAGGACTAAATAAGCCAGATGAAGAACTTTGGTTCCATGTATGCGAAGAATAATTGGTGTGTGTTGTGTTTTGCATACTGGACAGTCCCCCGATATTTGAACGGTACCCCATGTCAGGATTTTCTGAAGTCGTACTGTACCCTCGG                                                                                              ]
[-] EMBL CD090834             [                                                                                                                                                                                                                                                                                                       AATAATTGGTGTGTGTTGTGTTTTGCATACTGGACAGTCCCCCGATATTTGAACGGTACCCAATGTCAGGATTTTCTGAAGTCGTACTGTACCCTCGGCTCGCTGCAGTTGTCGCTGGTGTACTAAAAGAAGTTTGGTGTGGTGTATCAGCTCTCGAAGATAGTGAANTAGTAGATGAAACCAAA       ]


>consensus_9699#3 TTTAAGGTTTAGTACTGCTACCACCAACTTATAGCACTGGTTGTTTGACTTGTTGGTTTT CTACTTACATCATTACCAAGTTTTTCAGTACTATATGGTACATTAGAGCTGAAAGAAGAT CCGAAAGATTGTTGAGGAGAACTAATTATCCTGGTTCCAGTAGTATGATCAGAAGCATCG AATCCTGTCGACGGTTGCTGATTCATTAGATTTGGTTTCGTAGTCGAATCCATTGGTGGT ATTTTGGAAGGACTAAATAAGCCAGATGAAGAACTTTGGTTCCATGTATGCGAAGAATAA TTGGTGTGTGTTGTGTTTTGCATACTGGACAGTCCCCCGATATTTGAACGGTACCCAATG TCAGGATTTTCTGAAGTCGTACTGTACCCTCGGCTCGCTGCAGTTGTCGCTGGTGTACTA AAAGAAGTTTGGTGTGGTGCATCANCTCTCGAAGATAGTGAACTAGTAGATGAACCAAAA CTTGTG



consensusID : consensus_9699#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 292
fasta sequence
                              [GGTCATGATTTGCACCAGATGACAGAAATCACACTTAAAACATCGTGAAATGTTCTTTACTTTCATTACAAGCAAGGCTTTTCATACAGCCGAACTCTTGCACATGCAGTGAAGCACTTTTCTGTTGAAGGTCAGTTAAAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTTGAAGGGACGCGGAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTC]

[+] EMBL CD145697             [GGTCATGATTTGCACCAGATGACAGAAATCACACTTAAAACATCGTGAAATGTTCTTTACTTTCATTACAAGCAAGGCTTTTCATACAGCCGAACTCTTGCACATGCAGTGAAGCACTTTTCTGTTGAAGGTCAGTTAAAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATTGATATGTTTGAAGGGACGCGGAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTC]


>consensus_9699#4 GGTCATGATTTGCACCAGATGACAGAAATCACACTTAAAACATCGTGAAATGTTCTTTAC TTTCATTACAAGCAAGGCTTTTCATACAGCCGAACTCTTGCACATGCAGTGAAGCACTTT TCTGTTGAAGGTCAGTTAAAGTTCCGTGCATTGCTTTTTGTGCCTAAACGCGCACCAATT GATATGTTTGAAGGGACGCGGAAAAAGCGGAGCAACATTAAATTGTATGTGCGAAGAGTC CTCATCATGGATACCTGTGAGGATATGATTCCCGAGTACTTGAGTTTCGTTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9699#1      ---------------------------------------ATCCCTATCCTTGATTTGGGT 21
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      TGTATTTATTGAGGAGAATTAACAGTGGCACGGTATGTTGTACTCACAACGGAAGGAAAG 60
consensus_9699#2      ------------------------------------------------------------
consensus_9699#3      ------------------------------------------------------------
                                                                                  

consensus_9699#1      TACTGGTCACATGTAATACAGAACATGATTCAGGTGGATCAGTTCAAGTTATCATACGAC 81
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      TGTGTTACAAGCGTTCAATGTAATACAGTTAAACAACAAGTACAATTGTTTAATGCTTAA 120
consensus_9699#2      -----------------------TCCAGGCCAGAATTCGGCACGAGGGGAGCCAATGCTA 37
consensus_9699#3      ------------------------------------------------------------
                                                                                  

consensus_9699#1      TAGTGCGGATAAAATCATTTCAAGACAAATTACAGGTTAGTAGAAGCAGCAACGGTGTAA 141
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      TGTACAGAATATGAAAATACATGCGATAACTATGAAAAATTATTTACAAAATAGGTTTTT 180
consensus_9699#2      TATTGGGAGTGTCTTTGGCTGTGTGCAAAGCTGGTGCAGCTGAAGCCGGTTTACCTCTCT 97
consensus_9699#3      ------------------------------------------------------------
                                                                                  

consensus_9699#1      GTGGTACTAGAATAAATTAGGTACACA-AAAACAAGAAAAGTTAAAAGATCTCAAGATTT 200
consensus_9699#4      -------------------------------------------------GGTCATGATTT 11
consensus_9699#0      AAGGTTCTATCTCCACATAGCTCCCCCCAGAGTGTCCGGAGGTAACACTGATTACAATAT 240
consensus_9699#2      ATAGGTATATTGCGAGGTTAGCT------GGGCATGAAGATGTTATAATGCCTG---TTC 148
consensus_9699#3      -------------------------------------------------TTTAAGGTTTA 11
                                                                               *  

consensus_9699#1      ACAC--CCATGATTGT-GAACGATAAT-GAGTCACAT-CACCAAAAGTCTTTAACCAGTG 255
consensus_9699#4      GCAC--CAGATGACAG-AAATCACACT-TAAA-ACAT-CGTGAAATGTTCTTTAC----- 60
consensus_9699#0      GAACAACAAAAATTGA-GAAATATTGTATACAAATGTACATAAAATAGTATTTACT-GTA 298
consensus_9699#2      CAGCATTCAATGTCAT-TAATGGTGGC--AGTCATGCCGGCAACAAGCTAGCCAT----- 200
consensus_9699#3      GTACTGCTACCACCAACTTATAGCACT--GGTTGTTTGACTTGTTGGTTTTCTAC----- 64
                         *               *                                 *      

consensus_9699#1      GTTTTATAATAATCACAACGATACCAACTACATCGACT-ACACCT-----ATTACCGTAG 309
consensus_9699#4      -TTTCATTACAAGCAAGGCTTTTCATACAGC--CGA---ACTCTT-----GCACATGCAG 109
consensus_9699#0      ATAACGGAA-AAAAAAAATGGTGGAGATAGGAATAAATGGCGCGTTAATAGTATACGCTA 357
consensus_9699#2      ---GCAAGA-ATTTATGATTCTGCCTACTGGGGCCA---GCTCTT---TCACTGAAGCAA 250
consensus_9699#3      -TTACATCATTACCAAGTTTTTCAGTACTATATGGT---ACATTAG---AGCTGAAAGAA 117
                              *     *      *    *             *                   

consensus_9699#1      TT--CAGTTCAATTGTCTACAAATTCGTACATT----GGTTCCATGTCTTGCTTTGACTA 363
consensus_9699#4      TG--AAGCACTTTTCTGTTGAAGGTCAGTTAA-----AGTTCCGTGCATTGCTTT--TTG 160
consensus_9699#0      TGCTACGCAAAATGAAACTGAAGAACAAACATTACAAAGTTTCG-GTTTGGTACTAATAA 416
consensus_9699#2      TGCAAATCGGTACTGAGGTGTACCACAATTTAA----AAGCTGTTATCAAACGTGAATAT 306
consensus_9699#3      GATCCGAAAGATTGTTGAGGAGAACTAATTATCCT--GGTTCCAGTAGTATGATCAGAAG 175
                                                                                  

consensus_9699#1      CTCCTAGCTTTTTTCAGC-CTACTCACACACTACACAACATCATCT-GTCAA---GATAG 418
consensus_9699#4      TGCCTAAACGCGC---AC-CAATTGATATGTT---TGAAGGGACGC-GGAAA---AAGCG 209
consensus_9699#0      TAATAAAATGTGCA-AAA-CTGTTAATA-GTCATAAAAAAAAATGG-ATGAATTTAATAA 472
consensus_9699#2      GGACTGGATGCATGCAACGTTGGTGACGAAGGTGGTTTTGCACCGA-ATATACAGGATAA 365
consensus_9699#3      CATCGAATCCTGTCGACGGTTGCTGATTCATTAGATTTGGTTTCGTAGTCGAATCCATTG 235
                                             * *                         *    *   

consensus_9699#1      -ATGATGCTTGTGCAAACATCTACGAGGAACCCTTAGAA--GACGTTCAT------GATC 469
consensus_9699#4      -GAGCAACATTAAATTGTATGTGCGAAGAGTCCTCATCATGGATACCTGT------GAGG 262
consensus_9699#0      -ATAGTTAGTTAGCATTCACTCGTTTATTACTATAACAATTTTTTCTTATT-----AAAA 526
consensus_9699#2      TATGAAAGGTCTTCAGCTGCTTGAAGAG-GCCATAAAAATTGCTGGCTATACTGGGAAAG 424
consensus_9699#3      -GTGGTATTTTGGAAGGACTAAATAAGCCAGATGAAGAACTTTGGTTCCATGTATGCGAA 294
                               *                         *  *                     

consensus_9699#1      GAAT-ACTGTGGTG--TGGTCTACTTATATCCATATA-AGTAGTACATGGTGTGGGTCAG 525
consensus_9699#4      ATATGATTCCCGAG--TACTTGAGTTTCGTTC---------------------------- 292
consensus_9699#0      AAAAAATTGGCAAAACCAGTGATAACAAATAAATGTA-GTTATTAAATGTACATGTAGGG 585
consensus_9699#2      TAGAGATTGGTATGGATTGTGCGGCTTCTGAGTTCCATAAGAATGGGAAATATGATTTAG 484
consensus_9699#3      GAATAATTGGTGTG--TGTTGTGTTTTGCATACTGGACAGTCCCCCGATATTTGAACGGT 352
                           * *           *                                        

consensus_9699#1      ACATAGAATGTATTTTGGGAGAAGACCGATGAGGAAAGAACCGAAATGAA----ACGCAA 581
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      AAAATAAATATCTTTTATTAGAAGATTGCGTAACTTCACAAAGTAATGCATACAACTGAT 645
consensus_9699#2      ATTTCAAGAACCCTCATTCTGCAGAGTCAACCTGGCTTAGTCCTGATGCA----ATGGCT 540
consensus_9699#3      ACCCAATGTCAGGATTTTCTGAAGTCGTACTGTACCCTCGGCTCGCTGCA-GTTGTCGCT 411
                                                                                  

consensus_9699#1      ACGTCTGGAAAATGTGTGAGCAATGGAATAATAGAAGAAACAGTGAAGATTGAAACAATT 641
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      TGATTGTGTTAGTCCATAAAATGTACATAACGTTTGGGTTTTTTAATAAGTCTCCCAGAT 705
consensus_9699#2      AATATGTACAAGCAAATGATAAGCAAATTTCCAATTGTGAGCATTGAAGATCCATTTGAT 600
consensus_9699#3      GGTGTACTAAAAGAAGTTTGGTGTGGTGCATCANCTCTCGAAGATAGTGAACTAGTAGAT 471
                                                                                  

consensus_9699#1      GGTTGTTAATTTGCAAATTGACTGTTCATTGTTTGGTAATCAGAATTTATTGAGATAGTC 701
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      CGTGTTAAACAAGAGGGTGTAGTGCTGAGTTTTTCCTCTTCCTCTTGTTTCTTAACAATT 765
consensus_9699#2      CAGGATGATTGGGAAACCTG---GCCCAAACTAACTTCTTCAACAAATATTCAAATTGTT 657
consensus_9699#3      GAACCAAAACTTGTG--------------------------------------------- 486
                                                                                  

consensus_9699#1      TGTAATGTTGCTTAAATA--CATTCGATTATCCCCAACCGGT-GTTTCGTTCGCTACAAT 758
consensus_9699#4      ------------------------------------------------------------
consensus_9699#0      GATGGGAGTGATTGTTTGTTCGCCGTATTGTCATCAGTGGCTTGAGGGGGTTCGTAGAAA 825
consensus_9699#2      GGAGACGAT--TTGACTGT-TACCAATCCAAAGCGCATTANACAGGCCATCGCTTCAAAG 714
consensus_9699#3      ------------------------------------------------------------
                                                                                  

consensus_9699#1      ACTAGTAAAGTACAAATATCCTATTTCCATAATTGCT-------- 795
consensus_9699#4      ---------------------------------------------
consensus_9699#0      GCTGGTTAATTCGGTCTATGCCTCGTGCCGAATTCTTGCCTCGAG 870
consensus_9699#2      GCTTGCAATTGTCT------------------------------- 728
consensus_9699#3      ---------------------------------------------
                                                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)