These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9700#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 641 fasta sequence [CAAGTGGGAGGGTATGTTGCGTCTCTTGGAATATAACAACAACTGGGCCTAGCTGACCAGGTGTCCATGGTAAACCAGTACGTTCAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTAGACAATTCATCTGTCTTGCTAACGTTCTGATGCTTGGATGATAATTTAGTGCCTTTTTTCTTGGTTTCCTGAGGGCAGTTGGTC] [+] EMBL CD147154 [CAAGTGGGAGGGTATGTTGCGTCTCTTGGAATATAACAACAACTGGGCCTAGCTGACCAGGTGTCCATGGTAAACCAGTACGTTCAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACACCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTAGACAATTCATCTGTCTT ] [+] EMBL CD147168 [CAAGTGGGAGGGTATGTTGCGTCTCTTGGAATATAACAACAACTGGGCCTAGCTGACCAGGTGTCCATGGTAAACCAGTACGTTCAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAATAGAACACGTTCTTCTTCGTCAATCAATCGAAC ] [+] EMBL CD147145 [CAAGTGGGAGGGTATGTTGCGTCTCTTGGAATATAACAACAACTGGGCCTAGCTGACCAGGTGTCCACGGTAAACCAGTACGTTCAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAGGC ] [+] EMBL CD147153 [ AAGTGGGAGGGTATGTTGCGTCTCTTGGAATATAACAACAACTGGGCCTAGCTGACCAGGTGTCCATGGTAAACCAGTACGTTCAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAAC ] [-] EMBL BF936201 [ GGAGGGTATGTTGCGTCTCTTGGAATATAACAACAATTGGGCCTAGCTGACCAGGTGTCCATGGTAAACCAGTACGTTCAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTT ] [-] EMBL CD096350 [ CAGCTAGTGCCTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTAGACAATTCATCTGTCTTGCTAACGTTCTGATGCTTGGATGATAATTTAGTGCCTTTTTTCTTGGTTTCCTGAGGGCAGTTGGTC] [-] EMBL CD096312 [ GCTAGTGCCTCCAAATCTGGACGANAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTAGACAATTCATCTGTCTTGCTAACGTTCTGATGCTTGGATGATAATTTAGTGCCTTTTTTCTTGGTTTCCTGAGGGCAGTTGGTC] [-] EMBL CD154185 [ CTCCAAATCTGGACGAAAATGTTCTGAAAAAGCATCGCTTGCATCCGCAAGGAAAGTGAACATATCACTATGAAGACGATCAGACATAGTACGATAGATGACAACATCAGCTAATGCAAACACTTTTAACAATAAACGTCTTTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACACGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCA ] [-] EMBL CD096480 [ TATCACTATGAAGACGATCAGACATAGTACGATAGATGNCAACATCAGCTAATGCAAACACTTTTACCAATAAACGTCTNTGTCGATTAGGATTAGGGCTAGCACCAAGCAAACCTTCAGTATCTATGAGGAGATAGCCCTCTTTAGGTAGATAGGCGGCCCATATTCCAATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTAGACAATTCATCTGTCTTGCTAACGTTCTGATGCTTGGATGATAATTTAGTGCCTTTTTTCTTGGTTTCCTGAGGGCAGTTGGTC] [-] EMBL CD070577 [ AATCGTACATGTGGCTTGAGAGGGCGAGGTGACAAATACATCTGCACCACCGCAAAACGCTTGATNTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTTGACAATTCATCTGTCTTGCTAACGTTCTGATGCTTGGATGATAATTTAGTGCCTTTTTTCTTGGTTTCCTGAGGGCAGTTGGTC] [-] EMBL CD170248 [ TGACAAATACATCTGCACCACCGCAAAACGCTTGATTTAGTGTATGTGACTTCCCATCACCTGTATTTCCAACGATAGCGATAAGTTTTACTGTTCTATCTGCAGGACAACCCAAATGCCAAGCCAAAACGTCTGCATCTTCAAACAGAACACGTTCTTCTTCGTCAATCAATCGAACAGAACATGGAGGCTGAGGACGGGTAGACAATTCATCTGTCTTGCTAACGTTCTGGTGCTTGGATGATAATTTAGTGCCTTTTTTCTTGGTTT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||