These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9760#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1006 fasta sequence [CCCTGAGAGGTTATACGGATTACTACCATTACTCAAATTATGCATCTGACGATGATGATGATGATGAAATTGAAGAATTTAAACGAAAAACGGAAGCAAATCGAAAAGCAAGAGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCAGATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAATGAATTCGATGAAGCCAGACAA-CGAGCCTGGACAAGGGATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCTGAAAGACGACCTTTCTATGTTCCTTCAACACAACTCAGTGTAAGAAGAGGTTCTTACAACAGATACAGTGATATTCGTAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCAACTGAAACAGCAAGACAAAAAATGAAACGAGTCGAGGAACGTTTAGAAGGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAGAAATATGCGTCATTCATTAAGAGAGATTAATGATAAAATGTCAAAACATCGCTTTCTTCTGGATCGTCACAATTCAGCAGACTTGGATGAAAATGATAAATGTAAGGTATCTGATAGAATTAATGAAAAATATAAGGAATTAGAAGAGAGAATGCCATGTCTGACTATGTCTGATAGAGCACGTGAAAAGGAAAAACGTACAACTCGTTTTGATCCCACCTTTATCCCGGGATATTCTACTGGTTTAAGTATTATAAACTCTGAACAGAATGCTGAATTACGAGGTCGCATTAAATCATTGCTGTTACGAACAAAGCGAAGTGGATAAATACCGACTCTTTCAGTGTTTCATTTTATCATGGTCATAACTATATAGGACTTCACTGAAATTGTAATATGGAATATTGATTAGATAACA-ATATACCTTTAATAAAATAATAAAGCTTG] [+] EMBL BE505119 [CCCTGAGAGGTTATACGGATTACTACCATTACTCAAATTATGCATCTGACGATGATGATAATGATGAAATTGAAGAATTTAAACGAAAAACGGAAGCAAATCGAAAAGCAAGAGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCAGATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAATGAATTCGATGAAGCCAGACAACCGAGCCTCGACAANGGATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCNGAAAnang ] [+] EMBL CD078302 [ CGGATTACTACCATTACTCAAATTATGCATCTGACGATGATGATGATGATGAAATTGAAGAATTTAAACGAAAAACGGAAGCAAATCGAAAAGCAAGAGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCAGATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAATGAATTCGATGAAGCCAGACAA CGAGCCTGGACAAGGGATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCTGAAAGACGACCTTTCTATGTTCCTTCAACACAACTCAGTGTAAGAAGAGGTTCTTACAACAGATACAGTGATATTCGTAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCAACTGAAACAGCAAGACAAAAAATGAAACGAGTCGAGGAACGTTTAGAAGGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAGAAATATGCGTCATTCATTAAGAGAGATTAATGANTAAATGTCAna ] [+] EMBL CD078390 [ caGGATCACTACCATTACTCAAATTATGCATCTGACGATGATGATGATGATGAAATTGAAGAATTTAAACGAAAAACGGAAGCAAATCGAAAAGCAAGAGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCATATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAATGAATTCGATGAAGCCAGACAA CGAGCCTGGACAAGGGATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCTGAAAGACGACCTTTCTATGTTCCTTCAACACAACTCAGTGTAAGAAGAGGTTCTTACAACAGATACAGTGATATTCGTAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCAACTGAAACAGCAAGACAAAAAATGAAACGAGTCGAGGAACGTTTAGAAGGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAG ] [-] EMBL CD190042 [ ATTACTACCATTACTCAAATTATGCATCTGACGATGATGATGATGATGAAATTGAAGAATTTAAACGAAAAACGGAAGCAAATCGAAAAGCAAGAGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCAGATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAATGAATTCGATGAAGCCAGACAA CGAGCCTGGACAAGGGATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCTGAAAGACGACCTTTCTATGTTCCTTCAACACAACTCAGTGTAAGAAGAGGTTTTTACAACAGATACAGTGATATTCGTAATGGTGATCCATCCGATAAATCGACTATGGATGATCCTTTATCAAAAAGCCCAATGGGAGTGATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCTACTGTAACAGCA ] [-] EMBL CD145441 [ AACGAAAAACGGAAGCAAATCGAAAAGCAAGAGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCAGATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAGTGAATTCGATGAAGCCAGACAA CGAGCCTGGACAAGGGATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCTGAAAGACGACCTTTCTATGTTCCTTCAACACAACTCAGTGTAAGAAGAGGTTCTTACAACAGATACAGTGATATTCGTAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGT ] [+] EMBL CD078769 [ AGAAAAAGCTCGACAAGAATTTGAACGGGACATAGAAAAATCAGCTGAATCAGATGCACGTCAGCCAGCACGTAGAGCTTCTGACGCTGTTCTCAATGAATTCGATGAAGCCAGACAA CGAGCCTGGACAAGGTATCAACAAACTTTAGAATACATTGACGAGATATTGAGAAACGCTGAAAGACGACCTTTCTATGTTCCTTCAACACAACTCAGTGTAAGAAGAGGTTCTTACAACAGATACAGTGATATTCGTAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCAACTGAAACAGCAAGACAAAAAATGAAACGAGTCGAGGAACGTTTAGAAGGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAGAAATATGCGTCATTCATTAAGAGAGATTAATGATAAAATGTCAAAACATCGCTTTCTTCTGGATCGTCACAATTCAGCAGACTTGGATGAAAATGATAAATGTAAGGTATCTGATAGAATTAATGAAAAATATAAGGAATTAGAAGAGAGAATGCCATGTCTGACTATGTCTGATAGAGCACGTGAAAAGGAAAAcg ] [+] EMBL CD135801 [ TCAGTGTAAGAAGAGGTTCTTACAACAGATACAGTGATATTCGTAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCAACTGAAACAGCAAGACAAAAAATGAAACGAGTCG ] [-] EMBL CD073229 [ TAATGGTGATCAATCCGATAAATCGACTATGGATGATCATTTATCAAAAAGCCAAATGGAAGTAATACGATCAGTAAATAGAAAGATAAAAGACCCTAGTTCAACTGAAACAGCAAGACAAAAAATGAAACGAGTCGAGGAACGTTTAGAAGGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAGAAATATGCGTCATTCATTAAGAGAGATTAATGATAAAATGTCAAAACATCGCTTTCTTCTGGATCGTCACAATTCAGCAGACTTGGATGAAAATGATAAATGTAAGGTATCTGATAGAATTAATGAAAAATATAAGGAATTAGAAGAGAGAATGCCATGTCTGACTATGTCTGATAGAGCACGTGAAAAGGAAAAACGTACAACTCGTTTTGATCCCACCTTTATCCCGGGATATTCTACTGGTTTAAGTATTATAAACTCTGAACAGAATGCTGAATTACGAGGTCGCATTAAATCATTGCTGTTACGAACAAAGCGAAGTGGATAAATACCGACTCTTTCAGTGTTTCATTTTATCATGGTCATAACTATATAGGACTTCACTGAAATTGTAATATGGAATATTGATTAGATAACA ATAT ] [+] EMBL AA960681 [ GACAAAAAATGAAACGAGTCGAGGAACGTTTAGAAGGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAGAAATATGCGTCATTCATTAAGAGAGATTAATGATAAAATGTCAAAACATCGCTTTCTTCTGGATCGTCACAATTCAGCAGACTTGGATGAAAATGATAAATGTAAGGTATCTGATAGAATTAATGAAAAATATTAGGGATTAGAAGAGAGTATGCCATGTCTGACTATGTCTGATAGAGCACGTGAAAAGGAAAAACGTACAACTCGTTTTGATCCCACCTTTATCCCGGGATATTCTACTGGTTTAAGTATTATA ] [+] EMBL CD079981 [ GGTATTCTAGATTATGAGTTGCCAAGTGCAGATAGTTTCAGAAATATGCGTCATTCATTAAGAGAGATTAATGATAAAATGTCAAAACATCGCTTTCTTCTGGATCGTCACAATTCAGCAGACTTGGATGAAAATGATAAATGTAAGGTATCTGATAGAATTAATGAAAAATATAAGGAATTAGAAGAGAGAATGCCATGTCTGACTATGTCTGATAGAGCACGTGAAAAGGAAAAACGTACAACTCGTTTTGATCCCACCTTTATCCCGGGATATTCTACTGGTTTAAGTATTATAAACTCTGAACAGAATGCTGAATTACGAGGTCGCATTAAATCATTGCTGTTACGAACAAAGCGAAGTGGATAAATACCGACTCTTTCAGTGTTTCATTTTATCATGGTCATAACTATATAGGACTTCACTGAAATTGTAATATGGAATATTGATTAGATAACA ATATACCTTTAATAAAATAATAAAGCTTG] [-] EMBL CD072952 [ TGGCTATGTCTGATAGAGCACGTGAAAAGGAAAAACGTACAACTCGTTTTGATCCCACCTTTATCCCGGGATATTCTACTGGTGTAAGTATTATAAACTCTGAGCAGAATGCTGAATTACGAGGTCGCATTAAATCATTGCTGTTACGAACAAAGCGAAGTGGATAAATACCGACTCTTTCAGTGTTTCATTTTATCATGGTCATAACTATATAGGGCTTCACTGAAATTGTAATAGGGGATATTGATTAGATAACAGATATACCTTTAATAAAATAATAAAGCTT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||