These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9779#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1137 fasta sequence [ACCTGGAATTCCTGGAACGAAAGGAGAAAAAGGTTTCCCTGGTCGAGAGGTATATGGAAGGAAAGGTGAAAAAGGTTCACGTGGATTTCCAGGACCCATTGGACCACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCTCCTGGGCCTAAAGGAGTTAAAGGTCAACCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTGCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATCCCTGGTGAACCAGGCTTGGATGGCTCACCAGGACAAAAGGGATTACCTGGAGCCCAAGGACGAGATGGTCTTGTTGGGGTGCCTG-GTCAAAAGGGTGAGAAAGGTGAACGTGGAAATGATGGTTCACGTGGACCCAAAGGCGAACCGGGTCCTGTTGAAATAGTAAATGTCACTGTACCAGAAGCACCACGTGGCGATGTTGGTCGTCCTGGTCGTGCCGGAGTAGTCGGTGAACAAGGTCCGAAAGGTTTTCCTGGTCCTAAAGGCTTACCTGGGCCAGAAGGTCCTAAGGGCGACAGTGGACAGCCAGGGTTACCAGGTTTCAGTGGAACAGTAGGAAAACCTGGAAG-ACGTGGTGAACCAGGTCGTGATGGAATTGTATTCGATGCACAAAAAGGAGCTTCGGGTATTCCTGGCAGAGATGGCATTAAGGGTGAAAAAGGAGAAAAAGGAGACAGAGGAATGGATAATATTGTTGATCAAATATTCGAGTATATCAAAGGTGAAACCGGTCCGAAAGGATACCCAGGAGACAAAGGATTATCAGGATTCCCAGGAGAAAAAGGCAGAGAAGGTGAGAAAGGAATTGCTGGAATACCTGGAAAACAGGGGAAACCAGGTTTTCCTGGTCTACAAGGAGCTGCAGGTGAACGGGGAGACANAGGTTTTATGGGCCCCAAAGGACCGAGAGGTATTTCAGGTCCATCAGGAGAACCGGNNAGAAAGGGAATAAAAGG-CTACTTGGCCCAAAAGGTCTTCCTGGACCTGCTGGTGACATAGGTGAACGGTGTCCA] [+] EMBL CD068711 [ACCTGGAATTCCTGGAACGAAAGGAGAAAAAGGTTTCCCTGGTCGAGAGGTATATGGAAGGAAAGGTGAGAAAGGTTCACGTGGATTTCCAGGACCCATTGGACCACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCTCCTGGGCCTAAAGGAGTTAAAGGTCAGCCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTGCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATCCCTGGTGAACCAGGCTTGGATGGCTCACCAGGACAAAAGGGATTACCTGGAGCCCAAGGACGAGATGGTCTTGTTGGGGTGCCTG GTCAAAAGGGTGAGAAAGGTGAACGTGGAAATGATGGTTCACGTGGACCCAAAGGCGAACCGGGTCCTGTTGAAATA TAAATGTC ] [+] EMBL CD119390 [ accgtctAACGAAAGGAGAAAAAGGTTTCCCTGGTCGAGAGGTATATGGAAGGAAAGGTGAAAAAGGTACACGTGGATTTCCATGACCCATTGGACCACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCTTTGGGAAATA ] [-] EMBL CD190267 [ GAAAGGAGAAAAAGGTTTCCCTGGTCGAGAGGTATATGGAAGGAAAGGTGAAAAAGGTTCACGTGGATTTCCAGGACCCATTGGACCACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCTCCTGGGCCTAAAGGAGTTAAAGGTCAACCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTGCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATC ] [+] EMBL CD133783 [ CACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCTCCTGGGCCTAAAGGAGTTAAAGGTCGACCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTTCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATCCCTGGTGAACCAGGCTTGGATGGCTCACCAGGACAAAAGGGATTACCTGGAGCCCAAGGACGAGATGGTCTTGTTGGGGTGCCTG GTCAAAAGGGTGAGAAAGGTGAACGTGGAAATGATGGTTCACGTGGACCCAAAGGCGAACCGGGTCCTGTTGAAATAGTAAATGTCACTGTACCAGAAGCACCACGTGGCGATGTTGGTCGTCCTGGTCGTGCCGGAGTAGTCGGTGAACAAGGTCCGAAAGGTTTTCCTGGTCCTAAAGGCTTACCTGGGCCAGAAAGTCCTAAGGGCGACAGTGGACAGCCAGGGTTACCAGGTTTCAGTGGAACAGTAGGAAGACCTGGAAGAACGT GTGAACCA GTCGTGATGGAtt ] [+] EMBL CD191538 [ CACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCTCCTGGGCCTAAAGGAGTTAAAGGTCAACCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTGCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATCCCTGGTGAACCAGGCTTGGATGGCTCACCAGGACAAAAGGGATTACCTGGAGCCCAAGGACGAGATGGTCTTGTTGGGGTGCCTGNGTC AAAGGGTGAGAAAGGTGAACGTGGAAATGATGGTTCACGTGGACCCAAAGGCGAACCGGGTCCTGTTGAAATAGTAAATGTCACTGTACCAGAAGCACCACGTGGCGATGTTag ] [+] EMBL CD191574 [ CACCTGGTGATCGAGGAGCTTCAGGTATACCAGGTCCTATTGGTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCCCCTGGGCCTAAAGGAGTTAAAGGTCAACCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTGCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATCCCTGGTGAACCAGGCTTGGATGGCTCACCAGGACAAAAGGGATTACCTGGAGCCCAAGGACGAGATGGTCTTGTTGGGGTGCCTG GTCAAAAGGGTGAGAAAGGTGAACGTGGAAATGATGGTTCACGTGGACCCNAAGGCGAACCGGGTCCTGTTGAAATAGTAAATGTCACTGTACCAGAAGC ] [+] EMBL CD191577 [ GTGACCAGGGGGAAATAGGTCCTAGTATTGATGGTCCTCCTGGGCCTAAAGGAGTTAAAGGTCAACCTGGTTTACCTGGTATACGTGGGCGTGAGGGTGATCCTGGTCCTGCTGGAGAAAAAGGGGATTGCATTGTGTGCCCAGACGGAAGACCTGGTTTACAAGGACCGAAAGGTTTCCGAGGTCAACCTGGAATCCCTGGTGAACCAGGCTTGGATGGCTCACCAGGACAAAAGGGATTACCTGGAGCCCAAGGACGAGATGGTCTTGTTGGGGTGCCTG GTCAAAAGGGTGAGAAAGGTGAACGTGGAAATGATGGTTCACGTGGACCCAAAGGCGAACCGGGTCCTGTTGAAATAGTAAATGTCACTGTACCAGAAGCACCACGTGGCGATGTTGGTC ] [+] EMBL CD098096 [ GAACGTGGAAATGATGGTTCACGTGGACCCAAAGGCGAACCGGGTCCTGTTGAAATAGTAAATGTCACTGTACCAGAAGCACCACGTGGCGATGTTGGTCGTCCTGGTCGTGCCGGAGTAGTCAGTGAACAAGGTCCGAAAGGTTTTCCTGGTCCTAAAGGCTTACCTGGGCCAGAAGGTCCTAAGGGCGACAGTGGACAGCCAGGGTTACCAGGTTTCAGTGGAACAGTAGGAAAACCTGGAAG ACGTGGTGAACCAGGTCGTGATGGAATTGTATTCGATGCACAAAAAGGAGCTTCGGGTATTCCTG ] [+] EMBL AI977505 [ AGCACCACGTGGCGATGTTGGTCGTCCTGGTCGTGCCGGAGTAGTCGGTGAACAAGGTCCGAAAGGTTTTCCTGGTCCTAAAGGCTTACCTGGGCCAGAAGGTCCTAAGGGCGACAGTGGACAGCCAGGGTTACCAGGTTTCAGTGGAACAGTAGGAAAACCTGGAAG ACGTGGTGAACCAGGTCGTGATGGAATTGTATTCGATGCACAAAAAGGAGCTTCGGGTATTCCTGGCAGAGATGGC ] [+] EMBL CD183398 [ AGTAGTCGGTGAACAAGGTCCGAAAGGTTTTCCTGGTCCTAAAGGCTTACCTGGGCCAGAAGGTCCTAAGGGCGACAGTGGACAGCCAGGGTTACCAGGTTTCAGTGGAACAGTAGGAAAACCTGGAAG ACGTGGTGAACCAGGTCGTGATGGAATTGTATTCGATGCACAAAAAGGAGCTTCGGGTATTCCTGGCAGAGATGGCATTAAGGGTGAAAAAGGAGAAAAAGGAGACAGAGGAATGGATAATATTGTTGATCAAATATTCGAGTATATCAAAGGTGAAACCGGTCCGAAAGGATACCCAGGAGACAAAGGATTATCAGGATTCCCAGGAGAAAAAGGCAGAGAAGGTGAGAAAGGAATTGCTGGAATACCTGGAAAACAGGGGAAACCAGGTTTTCCTGGTCTACAAGGAGCTGCAGGTGAACGGGGAGACANAGGTTTTATGGGCCCCAAAGGACCGAGAGGTATTTCAGGTCCATCAGGAGAACCGGNNAGAAAGGGAATAAAAGG CTACTTGGCCCAAAAGGTCTTCCTGGACCTGCTGGTGACATAGGTGAACGGTGTCCA] [+] EMBL CD183227 [ AGTAGTCGGTGAACAAGGTCCGAAAGGTTTTCCTGGTCCTAAAGGCTTACCTGGGCCAGAAGGTCCTAAGGGCGACAGTGGACAGCCAGGGTTACCAGGTTTCAGTGGAACAGTAGGAAAACCTGGAAG ACGTGGTGAACCAGGTCGTGATGGAATTGTATTCGATGCACAAAAAGGAGCTTCGGGTATTCCTGGCAGAGATGGCATTAAGGGTGAAAAAGGAGAAAAAGGAGACAGAGGAATGGATAATATTGTTGATCAAATATTCGAGTATATCAAAGGTGAAACCGGTCCGAAAGGATACCCAGGAGACAAAGGATTATCAGGATTCCCAGGAGAAAAAGGCAGAGAAGGTGAGAAAGGAATTGCTGGAATACCTGGAAAACAGGGGAAACCAGGTTTTCCTGGTCTACAAGGAGCTGCAGGTGAACGGNGAGACAAAGGTTTTATGGGCCCCAAAGGACCGAGAGGTATTCCAGGTCCATCAGGAGAACCANGAAGAAAGGGAATAANAGGTCTACTTGGCCCAAAAGGTCTTCCTGGACCTGCTGGTGACATANGTGAACGTGGTCC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||