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Schistosoma mansoni
cluster # 9848 cluster # 9848       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9848#0 length = 1423 sequences # 8  
consensus_9848#1 length = 884 sequences # 2  
consensus_9848#2 length = 710 sequences # 1  

consensusID : consensus_9848#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1423
fasta sequence
                              [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGGAACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGAATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATTAAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGAGATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTAGATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTTCTTTGCATGAGATAGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTAGCTCATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGGGATGCCAAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTCTAGTTTCTCATGATCAGCAGCATCTACCATATAAATGATCGCATTGACTCCCCGGCAATACCGTTCCCACATACTTCTGAAACGAGGTTGACCGCCGATATCCCACATCTTTATAGTGACATTCCCTTTAGTAACCTTGCGCAAATTGAAACCAACAGTAGGTATCATATCTTCGTCAAACTTCCCAGAAGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTGAAGACCAACCAATGTTAGTTCCATTTCTTCCTTCCAGAAAAGACTTCGAATCCAATCGAGAATACGCTGGAAAAATGCCAACATTTTAATTCCAACTTCTCGATAAAGCGAATGGCAATGACAATAAGTAACTGAGTAGCGCACAAAAACGAAAAGCTCCTCGTGCCGAAATNTTGGC]

[+] EMBL AW017291             [TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGGAACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAATAGATTATTCCCGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD074625             [                                                                                                                                                                                                                                                                                                                                  TATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGAATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATTAAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGAGATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTAGATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTTCTTTGCATGAGATAGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTAGCTCATGTTCTGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD064305             [                                                                                                                                                                                                                                                                                                                                                                            gAAGC AATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGAATTCTTCTGTGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD197361             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGTATATCGGGATTACATATGAGATTTAATTAAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGAGATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTAGATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTTCTTTGCATGAGATAGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTAGCTCATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGGGATGCCAAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD080700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCAGCCAAAGATGGTATTNTAAATATTTCATTGGGTGAATTAGAGATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTAGATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTTCTTTGCATGAGATAGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTAGCTCATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGGGATGCCAAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTCTAGTTTCTCATGATCAGCAGCATCTACCATATAAATGATCGCATTGACTCCCCGGCAATACCGTTCCCACATACTTCTGAAACGAGGTTGACCGCCGATATCCCACATCTTTATAGTGACATTCCCTTTAGTAACCTTGCGCAAATTGAAACCAACAGTAGGTATCATATCTTCGTCAAACTTCCCAGAAGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTGAAGACCAACCAATGTTAGTTCCATTTCTTCCTTCCAGAAAAGACTTCGAATCCAATCGAGAATACGCTGGAAAAATGCCAACATTTTAATTCCAACTTCTCGATAAAGCGAATGGCAATGACAATAAGTAACTGAGTAGCGCACAAAAACGAAAAGCTCCTCGTGCCGAAATNTTGGC]
[+] EMBL CD117771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTACATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTCCTTTGCATGAGATACAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTACCTCATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGGGATGCCAAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTCTAGTTTCTCATGATCAGCACCATCTACCATATAAATGATCGCATTGACTCCCCGGCAATACCGTTCCCACATACTTCTGAAACGAGGTTGACCGCCGATATCCCACATCTTTATAGTGACATTCCCTTTAGTAACCTTGCGCAAATTGAAACCAACAGTACGTATCATATCTTCGTCAAACTTCCCAGAAGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTG                                                                                                                                                                                  ]
[+] EMBL CD117457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTAGATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTCCTTTGCATGAGATAGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTAGCTCATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGGGATGCCAAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTCTAGTTTCTCATGATCAGCAGCATCTACCATATAAATGATCGCATTGACTCCCCGGCAATACCGTTCCCACATACTTCTGAAACGAGGTTGACCGCCGATATCCCACATCTTTATAGTGACATTCCCTTTAGTAACCTTGCGCAAATTGAAACCAACAGTAGGTATCATATCTTCGTCAAACTTCCCAGAAGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTGAAGACCAACCAATGTTAGTTCCATTTt                                                                                                                                                       ]
[-] EMBL CD098313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCTTTATAGTGACATTCCCTTTAGTAACCTTGCGCAAATTGAAACCAACAGTAGGTATCATATCTTCGTCAAACTTCCCAGAAGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTGAAGACCAACCAATGTTAGTTCCATTTCTTCCTTCCAGAAAAGACTTCGAATCCAATCGAGAATACGCTGGAAAAATGCCAACATTTTAATTCCAACTTCTCGATAAAGCGA                                                                   ]


>consensus_9848#0 TACGCAGTACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGG TTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAA ACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAA AACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAG CAAGGAACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAA ATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTT GTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGT ATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTT ATTTGAATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATT AAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCG GACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGA ATTAGAGATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTT AGATTTGGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTTCTTTGCA TGAGATAGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAAT TAGCTCATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGG GATGCCAAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTCTAG TTTCTCATGATCAGCAGCATCTACCATATAAATGATCGCATTGACTCCCCGGCAATACCG TTCCCACATACTTCTGAAACGAGGTTGACCGCCGATATCCCACATCTTTATAGTGACATT CCCTTTAGTAACCTTGCGCAAATTGAAACCAACAGTAGGTATCATATCTTCGTCAAACTT CCCAGAAGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTGAAGACCAACCAATGT TAGTTCCATTTCTTCCTTCCAGAAAAGACTTCGAATCCAATCGAGAATACGCTGGAAAAA TGCCAACATTTTAATTCCAACTTCTCGATAAAGCGAATGGCAATGACAATAAGTAACTGA GTAGCGCACAAAAACGAAAAGCTCCTCGTGCCGAAATNTTGGC



consensusID : consensus_9848#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 884
fasta sequence
                              [TTTGATCTATAACGAAAATAAATTGT-CACCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCTTTAATGTATATTATGCATAGAAAATACCAGCACCCCTAAAATGAAATAACTATTACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGGGAACAAAGT-ATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGAATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATTAAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGACCTGGTGCCGAATTNATGGCTCCG]

[+] EMBL CD075313             [TTTGATCTATAACGAAAATAAATTGT CACCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCTTTAATGTATATTATGCATAGAAAATACCAGCACCCCTAAAATGAAATAACTATTACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGGGAACAAAGT ATACTAATTATACACATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD081489             [ TTGATCTATAACGAAAAT AATTGTCCACCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCTTTAATGTATATTATGCATAGAAAATACCAGCACCCCTANAATGAAATAACTATTACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAA GGAACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGAATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATTAAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGACCTGGTGCCGAATTNATGGCTCCG]


>consensus_9848#1 TTTGATCTATAACGAAAATAAATTGTCACCAATATGATCAATAAGACAAAAATTATTAGA GTACATTATATCTGTTGATTTTGTCGCTTTAATGTATATTATGCATAGAAAATACCAGCA CCCCTAAAATGAAATAACTATTACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTA AAACTGACTGACCAAAAAGGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGG TTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGA AATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTAT GGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATA TTTAGAAAATGAAGCAAGGGAACAAAGTATACTAATTATACACATTGATCATTTTCCAAC TACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACA ACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATAC GGAAATGATTATGTATGTAATAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATA AGATGGGATTGTTTATTTGAATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACA TATGAGATTTAATTAAATCTTCGCATAATGACCAATATATGAGAAAAATAACGTGTAAAT CAAAGTATAACTCGGACTGTCCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAAT TATTCATTGGGTGAATTAGACCTGGTGCCGAATTNATGGCTCCG



consensusID : consensus_9848#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 710
fasta sequence
                              [CATTTTATCACCAAATGAAAAACGCGTTCACATGGATGCAAAAAATATATGAACTGATTAGATTATAGACCAAAAAAGAGATTAGCATCAAATTTGATCTATAACGAAAATAAATTGTCACCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCTTTAATGTATATTATGCATAGAAAATAGAAAATACCAGCACCCCTAAAATGAAATAACTATTACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGAAACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGCCGTCGTGCCGAATTAATGGCCT]

[-] EMBL CD081676             [CATTTTATCACCAAATGAAAAACGCGTTCACATGGATGCAAAAAATATATGAACTGATTAGATTATAGACCAAAAAAGAGATTAGCATCAAATTTGATCTATAACGAAAATAAATTGTCACCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCTTTAATGTATATTATGCATAGAAAATAGAAAATACCAGCACCCCTAAAATGAAATAACTATTACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGAGAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGAAGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAATGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAATAGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGAAACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAAGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGTTCAAGTTTACAATGAAGTAAATATAGGCCGTCGTGCCGAATTAATGGCCT]


>consensus_9848#2 CATTTTATCACCAAATGAAAAACGCGTTCACATGGATGCAAAAAATATATGAACTGATTA GATTATAGACCAAAAAAGAGATTAGCATCAAATTTGATCTATAACGAAAATAAATTGTCA CCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCT TTAATGTATATTATGCATAGAAAATAGAAAATACCAGCACCCCTAAAATGAAATAACTAT TACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGA GAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGA AGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAA TGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAAT AGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGAAA CAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATAA GCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAGT TCAAGTTTACAATGAAGTAAATATAGGCCGTCGTGCCGAATTAATGGCCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      CATTTTATCACCAAATGAAAAACGCGTTCACATGGATGCAAAAAATATATGAACTGATTA 60
consensus_9848#0      ------------------------------------------------------------
                                                                                  

consensus_9848#1      --------------------------------TTTGATCTATAACGAAAATAAATTGTCA 28
consensus_9848#2      GATTATAGACCAAAAAAGAGATTAGCATCAAATTTGATCTATAACGAAAATAAATTGTCA 120
consensus_9848#0      ------------------------------------------------------------
                                                                                  

consensus_9848#1      CCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCT 88
consensus_9848#2      CCAATATGATCAATAAGACAAAAATTATTAGAGTACATTATATCTGTTGATTTTGTCGCT 180
consensus_9848#0      ------------------------------------------------------------
                                                                                  

consensus_9848#1      TTAATGTATATTATGCATAGAAA-------ATACCAGCACCCCTAAAATGAAATAACTAT 141
consensus_9848#2      TTAATGTATATTATGCATAGAAAATAGAAAATACCAGCACCCCTAAAATGAAATAACTAT 240
consensus_9848#0      -----------------------------------------------------TACGCAG 7
                                                                           **   * 

consensus_9848#1      TACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGA 201
consensus_9848#2      TACATTTAGTTAGGCTTAGTGTTCGGTTACCTGTAATTAAAACTGACTGACCAAAAAGGA 300
consensus_9848#0      TACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA 67
                      ***  * *   **    *  *   * **   * *  **     *   *          **

consensus_9848#1      GAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGA 261
consensus_9848#2      GAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGA 360
consensus_9848#0      GAGGCAAAAACAAACCGTCTATATTCAAAAAGCGAAAGGTTAATTTGAACGGGTTAGTGA 127
                      ************************************************************

consensus_9848#1      AGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAA 321
consensus_9848#2      AGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAA 420
consensus_9848#0      AGTAAAAACACAAATAAAGAAAATAAAACGAAAATCAGAAATTTGAGGAAAAAACACAAA 187
                      ************************************************************

consensus_9848#1      TGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAAT 381
consensus_9848#2      TGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAAT 480
consensus_9848#0      TGCGGTACTAGTTCATTGGGAAAACAACGAAACGAGTATGGAACATACAAAAAAACGAAT 247
                      ************************************************************

consensus_9848#1      AGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGGGA 441
consensus_9848#2      AGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGA-A 539
consensus_9848#0      AGTAATCACTTCGTTTTTACCCACAACCGAGTTAAAATATTTAGAAAATGAAGCAAGG-A 306
                      *********************************************************  *

consensus_9848#1      ACAAAGTA-TACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATA 500
consensus_9848#2      ACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATA 599
consensus_9848#0      ACAAAGTAATACTAATTATACACATTGATCATTTTCCAACTACAGCATACAAAAATAATA 366
                      ******** ***************************************************

consensus_9848#1      AGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAG 560
consensus_9848#2      AGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAG 659
consensus_9848#0      AGCAAATAGCAGTCACGCACACTTTTAATGAAGTGAGACAACAAAAATGTTTTTGTTTAG 426
                      ************************************************************

consensus_9848#1      TTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAA 620
consensus_9848#2      TTCAAGTTTACAATGAAGTAAATATAGGCCGTC---GTGCCGAATTAATGGCCT------ 710
consensus_9848#0      TTCAAGTTTACAATGAAGTAAATATAGGGAATGTGAATACGGAAATGATTATGTATGTAA 486
                      ****************************   *     * * *** * **    *      

consensus_9848#1      TAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGA 680
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      TAGATTATTCCCGCAAAGAAATTAATTACACAACGAAATAAGATGGGATTGTTTATTTGA 546
                                                                                  

consensus_9848#1      ATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATTAAATCT 740
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      ATTCTTCTGTGAGTGGTTACGAAGGTATATCGGGATTACATATGAGATTTAATTAAATCT 606
                                                                                  

consensus_9848#1      TCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGT 800
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      TCGCATAATGACCAATATATGAGAAAAATAACGTGTAAATCAAAGTATAACTCGGACTGT 666
                                                                                  

consensus_9848#1      CCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGA 860
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      CCATAATGTTGAATATCCAGCCAAAGATGGTATTTTAAATTATTCATTGGGTGAATTAGA 726
                                                                                  

consensus_9848#1      CCTGGTGCCGAATTNATGGCTCCG------------------------------------ 884
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      GATTATTATCAATCGAGTAAATGGATTATTTCAAATTCATTACTTTTATCGGTTAGATTT 786
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      GGAATGTTTAATTAACCATTGGAGTGTGATGTCTATATTTTCTTGTTCTTTGCATGAGAT 846
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      AGAGTAACAACATATCTCACGGTCAGTAATAGCCCCCAAATTGAGAGCTGTAATTAGCTC 906
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      ATGTTCTGCAAGAGCGTTTGGCAAATCCTTTTTATTTCCTAACACCAAAACAGGGATGCC 966
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      AAGTAACTGGGGTTTGTCAAGCAAAGCATGAAGCTCGTTGCGCGAAGCTTCTAGTTTCTC 1026
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      ATGATCAGCAGCATCTACCATATAAATGATCGCATTGACTCCCCGGCAATACCGTTCCCA 1086
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      CATACTTCTGAAACGAGGTTGACCGCCGATATCCCACATCTTTATAGTGACATTCCCTTT 1146
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      AGTAACCTTGCGCAAATTGAAACCAACAGTAGGTATCATATCTTCGTCAAACTTCCCAGA 1206
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      AGCAATTACATTAACGAAGGTGGTCTTTCCCGAGTACTGAAGACCAACCAATGTTAGTTC 1266
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      CATTTCTTCCTTCCAGAAAAGACTTCGAATCCAATCGAGAATACGCTGGAAAAATGCCAA 1326
                                                                                  

consensus_9848#1      ------------------------------------------------------------
consensus_9848#2      ------------------------------------------------------------
consensus_9848#0      CATTTTAATTCCAACTTCTCGATAAAGCGAATGGCAATGACAATAAGTAACTGAGTAGCG 1386
                                                                                  

consensus_9848#1      -------------------------------------
consensus_9848#2      -------------------------------------
consensus_9848#0      CACAAAAACGAAAAGCTCCTCGTGCCGAAATNTTGGC 1423
                                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)