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Schistosoma mansoni
cluster # 9965 cluster # 9965       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9965#0 length = 1556 sequences # 8  
consensus_9965#1 length = 359 sequences # 1  
consensus_9965#2 length = 314 sequences # 2  
consensus_9965#3 length = 269 sequences # 1  

consensusID : consensus_9965#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1556
fasta sequence
                              [AGAGGATCCCGGTGGTGATTAACGAGTGGCGAAATGAACAAAGTGAACTGAGCAATAATGAAATAACTACATCTCAGGCTACTGTTGAATGGATAACAAGCAGTGGAACTTGTAGTAATCTACCTCACTCCAATAGACTATGTCCAAGGGATCTAGAAAATGTGTGTTACCA-GTGAAGCTTTTGATAAT-CGGAATGGTGTACTTGCTTCAAACAAAACAACTTCATCGACAAATAGTGAGAATATACCGAATTCGGTCAGTATTGGTAAAGATAGTGGGACGTCGAAGATCATCCAGTCATCAACCTCTGATAAAAATGTTCCGCCAGCTGTTCCAGTCAAACCACAGGGTTTAACACATGTGTTTCGCACACAACAACAAACTAAAATAAACCAATCTCCTCATTTCTTCCCACATCAACCGCTTGCTAATAAAATAGATTCCAGTAATACTGCTACGATTGCAACAACAACTACCACTTCTGCTGCTGCCGNCGTCGCTACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGGGCATCTGGTGTGGTATATAGTGGATATGAGATTGCTACTGGCAGTCTAGTGGCTATTAAACAAATGAATTTAGCTCAACAGCCTAAAAAAGAACTAATCATTAATGAAATTTTGGTTATGAAGGCTAATCGTCAAGCAAATATTGTAAATTATCTAGACAGTTATTTAGTGTCCACTTCAGTCTCCACCAATATGGATCATCATCAGCAGTACATGAACGGTTCAAATCACAAGTACCAACAATCAACTCANAAGAATGATAGCCTCAATTCATCAACAATTAGTTCAGGGAATTCATCTAAAGGTGAAGAACTATGGGTTGTCATGGAGTATTTAGATGGTGGCTCACTGACCGATGTTGTCACCGAGACGTGTATGGAAGAAGGACATATTGCTTCAATATGCCGAGAGATACTACATGCCCTTGAATTTCTTCACGCGAATCGCGTCATTCATCGTGATATCAAATCAGACAATATTCTTCTTGGAATGGATGGATCTGTAAAACTGACAGACTTTGGCTTTTGTGCACAATTAAGCAATGATGGAACTAAACGTTCAACTATGGTTGGCACACCGTATTGGATGGCACCAGAAGTTGTTTTACGTAAAC-ATACGGTCCAAAGGTGGATATATGGTCATTAGGAATTATGGCCATTGAAATGGTAGATGGTGAACCACCCTATCTAAATGAAAATCCCGTTCGAGCATTGTATCTTATCGCTACCAATGGTAAACCGGAAATTAAAGAACGTGATCGTTTATCAAGCACATTTCTTAATTTCCTTGATCGTTGCCTAGAAGTAGATGTAGAACANAGAGCCACGGCTATTGAATTATTANCACATCCATTCATATGCCGATGTTCCAAACCATTNGAGTCATTGATTCCGCTG]

[+] EMBL CD068187             [AGAGGATCCCGGTGGTGATTAACGAGTGGCGAAATGAACAAAGTGAACTGAGCAATAATGAAATAACTACATCTCAGGCTACTGTTGAATGGATAACAAGCAGTGGAACTTGTAGTAATCTACCTCACTCCAATAGACTATGTCCAAGGGATCTAGAAAATGTGTGTTACCACGTGAAGCTTTTGATAATACGGAATGGTGTACTTGCTTCAAACAAAACAACTTCATCGACAAATAGTGAGAATATACCGAATTCGGTCAGTATTGGTAAAGAAAGTGGGACGTCGAAGATCATCCAGCCATCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD062569             [                                                                                                                                                                   GTGTTACCA GTGAAGCTTTTGATAAT CGGAATGGTGTACTTGCTTCAAACAAAACAACTTCATCGACAAATAGTGAGAATATACCGAATTCGGTCAGTATTGGTAAAGATAGTGGGACGTCGAAGATCATCCAGTCATCAACCTCTGATAAAAATGTTCCGCCAGCTGTTCCAGTCAAACCACAGGGTTTAACACATGTGTTTCGCACACAACAACAAACTAAAATAAACCAATCTCCTCATTTCTTCCCACATCAACCGCTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AW017376             [                                                                                                                                                                                                                      CAAAACAACTTCATCGACAAATAGTGAGAATATACCGAATTCGGTCAGTATTGGTAAAGATAGTGGGACGTCGAAGATCATCCAGTCATCAACCTCTGATAAAAATGTTCCGCCAGCTGTTCCAGTCAAACCACAGGGTTTAACACATGTGTTTCGCACACAACAACAAACTAAAATAAACCAATCTCCTCATTTCTTCCCACATCAACCACTTGCTAATAAAATAGATTCCAGTAATACTGCTACGATTGCAACAACAACTACCACTTCTGCTGCTGCCGNCGTCGCTACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGGAAGCAAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI976093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCCGCCGTCGCTACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGGGCATCTGGTGTGGTATATAGTGGATATGAGATTGCTACTGGCAGTCTAGTGGCTATTAAACAAATGAATTTAGCTCAACAGCCTAAAAAAGAACTAATCATTAATGAAATTTTGGTTATGAAGGCTAATCGTCAAGCAAATATTGTAAATTATCTAGACAGTTATTTAGTGTCCACTTCAGTCTCCACCAATATGGATCATCATCAGCAGTACATGAACGGTTCAAATCACAAGTACCAACAATCAACTCANAAGAATGATAGCCTCAATTCATCAACAATTAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD138956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACTGAAGACGTAGCCAAATCGACTACACCTAATGCGCCTAAGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGGGCATCTGGTGTGGTATATAGTGGATATGAGATTGCTACTGGCAGTCTAGCGGCTATTAAACAAATGAATTTAGCTCAACAGCCTAAAAAAGAACTAATCATTAATGAAATTTTGGTTATGAAGGCTAATCGTCAAGCTAATATTGTAAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI977098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCAAATATTGTAAATTATCTAGACAGTTATTTAGTGTCCACTTCAGTCTCCACCAATATGGATCATCATCAGCAGTACATGAACGGTTCAAATCACAAGTACCAACAATCAACTCAAAAGAATGATAGCCTCAATTCATCAACAATTAGTTCAGGGAATTCATCTAAAGGTGAAGAACTATGGGTTGTCATGGAGTATTTAGATGGTGGCTCACTGACCGATGTTGTCACCGAGACGTGTATGGAAGAAGGACATATTGCTTCAATATGCCGAGAGATACTACATGCCCTTGAATTTCTTCACGCGAATCGCGTCATTCATCGTGATATCAAATCAGACAATATTCTTCTTGGAATGGATGGATCTGTAAAACTGACAGACTTTGGCTTTTGTGCACAATTAAGCAATGATGGAACTAAACGTTCAACTATGGTTGGCACACCGTATTGGATGGCACCAGAAGTNGTTTTACG                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD171234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCATCAACAATTAGTTCAGGGAATTCATCTAAAGGTGAAGAACTATGGGTTGTCATGGAGTATTTAGATGGTGGCTCACTGACCGATGTTGTCACCGAGACGTGTATGGAAGAAGGACATATTGCTTCAATATGCCGAGAGATACTACATGCCCTTGAATTTCTTCACGCGAATCGCGTCATTCATCGTGATATCAAATCAGACAATATTCTTCTTGGAATGGATGGATCTGTAAAACTGACAGACTTTGGCTTTTGTGCACAATTAAGCAATGATGGAACTAAACGTTCAACTATGGTTGGCACACCGTATTGGATGGCACCAGAATGTGTTTTACGTAAAC ATACGG                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD189675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGAGTATTTAGATGGTGGCTCACTGACCGATGTTGTCACCGAGACGTGTATGGAAGAAGGACATATTGCTTCAATATGCCGAGAGATACTACATGCCCTTGAATTTCTTCACGCGAATCGCGTCATTCATCGTGATATCAAATCAGACAATATTCTTCTTGGAATGGATGGATCTGTAAAACTGACAGACTTTGGCTTTTGTGCACAATTAAGCAATGATGGAACTAAACGTTCAACTATGGTTGGCACACCGTATTGGATGGCACCAGAAGTTGTTTTACGTAAACAATACGGTCCAAAGGTGGATATATGGTCATTAGGAATTATGGCCATTGAAATGGTAGATGGTGAACCACCCTATCTAAATGAAAATCCCGTTCGAGCATTGTATCTTATCGCTACCAATGGTAAACCGGAAATTAAAGAACGTGATCGTTTATCAAGCACATTTCTTAATTTCCTTGATCGTTGCCTAGAAGTAGATGTAGAACANAGAGCCACGGCTATTGAATTATTANCACATCCATTCATATGCCGATGTTCCAAACCATTNGAGTCATTGATTCCGCTG]


>consensus_9965#0 AGAGGATCCCGGTGGTGATTAACGAGTGGCGAAATGAACAAAGTGAACTGAGCAATAATG AAATAACTACATCTCAGGCTACTGTTGAATGGATAACAAGCAGTGGAACTTGTAGTAATC TACCTCACTCCAATAGACTATGTCCAAGGGATCTAGAAAATGTGTGTTACCAGTGAAGCT TTTGATAATCGGAATGGTGTACTTGCTTCAAACAAAACAACTTCATCGACAAATAGTGAG AATATACCGAATTCGGTCAGTATTGGTAAAGATAGTGGGACGTCGAAGATCATCCAGTCA TCAACCTCTGATAAAAATGTTCCGCCAGCTGTTCCAGTCAAACCACAGGGTTTAACACAT GTGTTTCGCACACAACAACAAACTAAAATAAACCAATCTCCTCATTTCTTCCCACATCAA CCGCTTGCTAATAAAATAGATTCCAGTAATACTGCTACGATTGCAACAACAACTACCACT TCTGCTGCTGCCGNCGTCGCTACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCT AGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCT ATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGG GCATCTGGTGTGGTATATAGTGGATATGAGATTGCTACTGGCAGTCTAGTGGCTATTAAA CAAATGAATTTAGCTCAACAGCCTAAAAAAGAACTAATCATTAATGAAATTTTGGTTATG AAGGCTAATCGTCAAGCAAATATTGTAAATTATCTAGACAGTTATTTAGTGTCCACTTCA GTCTCCACCAATATGGATCATCATCAGCAGTACATGAACGGTTCAAATCACAAGTACCAA CAATCAACTCANAAGAATGATAGCCTCAATTCATCAACAATTAGTTCAGGGAATTCATCT AAAGGTGAAGAACTATGGGTTGTCATGGAGTATTTAGATGGTGGCTCACTGACCGATGTT GTCACCGAGACGTGTATGGAAGAAGGACATATTGCTTCAATATGCCGAGAGATACTACAT GCCCTTGAATTTCTTCACGCGAATCGCGTCATTCATCGTGATATCAAATCAGACAATATT CTTCTTGGAATGGATGGATCTGTAAAACTGACAGACTTTGGCTTTTGTGCACAATTAAGC AATGATGGAACTAAACGTTCAACTATGGTTGGCACACCGTATTGGATGGCACCAGAAGTT GTTTTACGTAAACATACGGTCCAAAGGTGGATATATGGTCATTAGGAATTATGGCCATTG AAATGGTAGATGGTGAACCACCCTATCTAAATGAAAATCCCGTTCGAGCATTGTATCTTA TCGCTACCAATGGTAAACCGGAAATTAAAGAACGTGATCGTTTATCAAGCACATTTCTTA ATTTCCTTGATCGTTGCCTAGAAGTAGATGTAGAACANAGAGCCACGGCTATTGAATTAT TANCACATCCATTCATATGCCGATGTTCCAAACCATTNGAGTCATTGATTCCGCTG



consensusID : consensus_9965#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 359
fasta sequence
                              [TACTGAAGACGTATCCAAATGGACTACACCTAATGCGCCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACTATAAATTAAGAGCTATCGTAAACAAAGGTGATACATATAAAAAATATCGTGTGGTATATAAAATTGGTCAAGGGGCATATGGTGTGGTATATAGTGGATGTCAGATCGACTCTGGCAGTCTAGCGGACTATTAAACAAATGAATTTAGCTCAACAGCCTATAAACCATCTAATCATAAATGAAATTCTGGTTATGAATGCTAATCAGTCATGCTAATATTGCAAATTATCTACACAGTTATTTAGTGTCCACTTCAGTCTCCACCAATATGGA]

[+] EMBL CD138955             [TACTGAAGACGTATCCAAATGGACTACACCTAATGCGCCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACTATAAATTAAGAGCTATCGTAAACAAAGGTGATACATATAAAAAATATCGTGTGGTATATAAAATTGGTCAAGGGGCATATGGTGTGGTATATAGTGGATGTCAGATCGACTCTGGCAGTCTAGCGGACTATTAAACAAATGAATTTAGCTCAACAGCCTATAAACCATCTAATCATAAATGAAATTCTGGTTATGAATGCTAATCAGTCATGCTAATATTGCAAATTATCTACACAGTTATTTAGTGTCCACTTCAGTCTCCACCAATATGGA]


>consensus_9965#1 TACTGAAGACGTATCCAAATGGACTACACCTAATGCGCCTAGGCGTCGTACTGGTAATCA TCGATTAACAGATCAGCAGGTACACTATAAATTAAGAGCTATCGTAAACAAAGGTGATAC ATATAAAAAATATCGTGTGGTATATAAAATTGGTCAAGGGGCATATGGTGTGGTATATAG TGGATGTCAGATCGACTCTGGCAGTCTAGCGGACTATTAAACAAATGAATTTAGCTCAAC AGCCTATAAACCATCTAATCATAAATGAAATTCTGGTTATGAATGCTAATCAGTCATGCT AATATTGCAAATTATCTACACAGTTATTTAGTGTCCACTTCAGTCTCCACCAATATGGA



consensusID : consensus_9965#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 314
fasta sequence
                              [CATACATCTCCATTTCAAAATACAATCCCTGAATCATCTACATGTTTACCATTTCAAGGAGATCGATCAGT-TCCTGAAT-CT-TGTATAATGGTCGGAGAATCTTCCGATGAAGAAGAAGAGGATGAGGATATTGATGATGAAGATCACGAACAAGAAGAGTACGACGAAGAAGAAGAAGGTGAGGAGTTAGGTGAAGATGAAGAAGAAAGCGAGAATGAACAAAGTGAACTGAGCAATAATGAAATAACTACATCTCAGGCTACTGTTGAATGGATGACAAGCAGTGGAACTTGTAGTAATCTACCTACTCCAAT]

[-] EMBL CD131751             [CATACATCTCCATTTCAAAATACAATCCCTGAATCATCTACATGTTTACCATTTCAAGGAGATCGATCAGT TCCTGAAT CT TGTATAATGGTCGGAGAATCTTCCGATGAAGAAGAAGAGGATGAGGATATTGATGATGAAGATCACGAACAAGAAGAGTACGACGAAGAAGAAGAAGGTGAGGAGTTAGGTGAAGATGAAGAAGAAAGCGAGAATGAACAAAGTGAACTGAGCAATAATGAAATAACTACATCTCAGGCTACTGTTGAATGGATGACAAGCAGTGGAACTTGTAGTAATCTACCTACTCCAAT]
[+] EMBL CD065117             [                                                CCATTTTATGGAGATCGATCAGTCTCCTGGATCCTCTGTATAATGGTCGGAGAATCTTCCGATGAAGAAGAAGAGGATGAGGATATTGATGATGAAGATCACGAACAAGAAGAGTACGACGAAGAAGAAGAAGGTGGGGAGTTAGGTGA                                                                                                                        ]


>consensus_9965#2 CATACATCTCCATTTCAAAATACAATCCCTGAATCATCTACATGTTTACCATTTCAAGGA GATCGATCAGTTCCTGAATCTTGTATAATGGTCGGAGAATCTTCCGATGAAGAAGAAGAG GATGAGGATATTGATGATGAAGATCACGAACAAGAAGAGTACGACGAAGAAGAAGAAGGT GAGGAGTTAGGTGAAGATGAAGAAGAAAGCGAGAATGAACAAAGTGAACTGAGCAATAAT GAAATAACTACATCTCAGGCTACTGTTGAATGGATGACAAGCAGTGGAACTTGTAGTAAT CTACCTACTCCAAT



consensusID : consensus_9965#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 269
fasta sequence
                              [TCCAGTAATACTGCTACGACTGCAACAACAACTACCACTTCTGCTGCTGCCGCCGTCGCTACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGGTAAGTTTTTTTCAACAAAAAACCTATTTCTTGTCATTTCAAGTTTTCGTT]

[+] EMBL CD195696             [TCCAGTAATACTGCTACGACTGCAACAACAACTACCACTTCTGCTGCTGCCGCCGTCGCTACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCTAGGCGTCGTACTGGTAATCATCGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGGTAAGTTTTTTTCAACAAAAAACCTATTTCTTGTCATTTCAAGTTTTCGTT]


>consensus_9965#3 TCCAGTAATACTGCTACGACTGCAACAACAACTACCACTTCTGCTGCTGCCGCCGTCGCT ACTGAAGACGTAGCCAAATCGACTACACCTAATGCACCTAGGCGTCGTACTGGTAATCAT CGATTAACAGATCAGCAGGTACACGATAAATTAAGAGCTATCGTAAGCAAAGGTGATCCA TATAAAAAATATCGTATGGTAGATAAAATTGGTCAAGGGTAAGTTTTTTTCAACAAAAAA CCTATTTCTTGTCATTTCAAGTTTTCGTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9965#0      AGAGGATCCCGGTGGTGATTAACGAGTGGCGAAATGAACAAAGTGAACTGAGCAATAATG 60
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      AAATAACTACATCTCAGGCTACTGTTGAATGGATAACAAGCAGTGGAACTTGTAGTAATC 120
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TACCTCACTCCAATAGACTATGTCCAAGGGATCTAGAAAATGTGTGTTACCAGTGAAGCT 180
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TTTGATAATCGGAATGGTGTACTTGCTTCAAACAAAACAACTTCATCGACAAATAGTGAG 240
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      AATATACCGAATTCGGTCAGTATTGGTAAAGATAGTGGGACGTCGAAGATCATCCAGTCA 300
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TCAACCTCTGATAAAAATGTTCCGCCAGCTGTTCCAGTCAAACCACAGGGTTTAACACAT 360
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      GTGTTTCGCACACAACAACAAACTAAAATAAACCAATCTCCTCATTTCTTCCCACATCAA 420
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      CCGCTTGCTAATAAAATAGATTCCAGTAATACTGCTACGATTGCAACAACAACTACCACT 480
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ---------------------TCCAGTAATACTGCTACGACTGCAACAACAACTACCACT 39
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TCTGCTGCTGCCGNCGTCGCTACTGAAGACG-TAGCCAAATCGACTACAC--CTAATGCA 537
consensus_9965#1      --------------------TACTGAAGACG-TATCCAAATGGACTACAC--CTAATGCG 37
consensus_9965#3      TCTGCTGCTGCCGCCGTCGCTACTGAAGACG-TAGCCAAATCGACTACAC--CTAATGCA 96
consensus_9965#2      -------CATACATCTCCATTTCAAAATACAATCCCTGAATCATCTACATGTTTACCATT 53
                                          * *  ** **  *  *  ***   *****    **     

consensus_9965#0      CCTAGGCGTCGTACTGGT----AATCATCGATTAACAGATCAGCAGGTACACGATAAATT 593
consensus_9965#1      CCTAGGCGTCGTACTGGT----AATCATCGATTAACAGATCAGCAGGTACACTATAAATT 93
consensus_9965#3      CCTAGGCGTCGTACTGGT----AATCATCGATTAACAGATCAGCAGGTACACGATAAATT 152
consensus_9965#2      TCAAGGAGATCGATCAGTTCCTGAATCTTGTATAATGGTCGGAGAATCTTCCGATGAAGA 113
                       * *** *    *   **     *   * *  ***  *      *      * ** **  

consensus_9965#0      AAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGG 653
consensus_9965#1      AAGAGCTATCGTAAACAAAGGTGATACATATAAAAAATATCGTGTGGTATATAAAATTGG 153
consensus_9965#3      AAGAGCTATCGTAAGCAAAGGTGATCCATATAAAAAATATCGTATGGTAGATAAAATTGG 212
consensus_9965#2      AGAAGAGGATGAGGATATTGATGATGAAGATCACGAACAAGAAGAGTACGACGAAGAAGA 173
                      *  **     *     *  * ****  * ** *  ** *      *    *  **   * 

consensus_9965#0      TCAAGG--GGCA-TCTGGTGTGGTATATAGTGGATATGAGATTGCTACTGGCAGTCTAGT 710
consensus_9965#1      TCAAGG--GGCA-TATGGTGTGGTATATAGTGGATGTCAGATCGACTCTGGCAGTCTAGC 210
consensus_9965#3      TCAAGG--GTAAGTTTTTTTCAACAAAAAACCTATTTCTTGTCATTTCAAGTTTTCGTT- 269
consensus_9965#2      AGAAGGTGAGGAGTTAGGTGAAGATGAAGAAGAAAGCGAGAATGAACAAAGTGAACTGAG 233
                        ****     * *    *       *      *                *    *    

consensus_9965#0      GG-CTATTAAACAAATGAATTTAGCTCAACAGCCTAAAAAAGAACTAATCATTAATGAAA 769
consensus_9965#1      GGACTATTAAACAAATGAATTTAGCTCAACAGCCTATAAACCATCTAATCATAAATGAAA 270
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      CAATAATGAAATAACTACATCTCAGGCTACTGTTGAATGGATGACAAGCAGTG---GAAC 290
                                                                                  

consensus_9965#0      TTTTGGTTATGAAGGCTAATC-GTCAAGCAAATATTGTAAATTATCTAGACAGTTATTTA 828
consensus_9965#1      TTCTGGTTATGAATGCTAATCAGTCATGCTAATATTGCAAATTATCTACACAGTTATTTA 330
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      TTGTAGTAATCTACCTACTCCAAT------------------------------------ 314
                                                                                  

consensus_9965#0      GTGTCCACTTCAGTCTCCACCAATATGGATCATCATCAGCAGTACATGAACGGTTCAAAT 888
consensus_9965#1      GTGTCCACTTCAGTCTCCACCAATATGGA------------------------------- 359
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      CACAAGTACCAACAATCAACTCANAAGAATGATAGCCTCAATTCATCAACAATTAGTTCA 948
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      GGGAATTCATCTAAAGGTGAAGAACTATGGGTTGTCATGGAGTATTTAGATGGTGGCTCA 1008
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      CTGACCGATGTTGTCACCGAGACGTGTATGGAAGAAGGACATATTGCTTCAATATGCCGA 1068
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      GAGATACTACATGCCCTTGAATTTCTTCACGCGAATCGCGTCATTCATCGTGATATCAAA 1128
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TCAGACAATATTCTTCTTGGAATGGATGGATCTGTAAAACTGACAGACTTTGGCTTTTGT 1188
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      GCACAATTAAGCAATGATGGAACTAAACGTTCAACTATGGTTGGCACACCGTATTGGATG 1248
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      GCACCAGAAGTTGTTTTACGTAAACATACGGTCCAAAGGTGGATATATGGTCATTAGGAA 1308
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TTATGGCCATTGAAATGGTAGATGGTGAACCACCCTATCTAAATGAAAATCCCGTTCGAG 1368
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      CATTGTATCTTATCGCTACCAATGGTAAACCGGAAATTAAAGAACGTGATCGTTTATCAA 1428
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      GCACATTTCTTAATTTCCTTGATCGTTGCCTAGAAGTAGATGTAGAACANAGAGCCACGG 1488
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      CTATTGAATTATTANCACATCCATTCATATGCCGATGTTCCAAACCATTNGAGTCATTGA 1548
consensus_9965#1      ------------------------------------------------------------
consensus_9965#3      ------------------------------------------------------------
consensus_9965#2      ------------------------------------------------------------
                                                                                  

consensus_9965#0      TTCCGCTG 1556
consensus_9965#1      --------
consensus_9965#3      --------
consensus_9965#2      --------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)