These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9996#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 611 fasta sequence [GGTCATAACTGGTTCACT-ATTCAATGTATGTGTATATATTAAAAAAAGTAGTACAAATCAAAATACACAACAGTCGAAGTACAACACACAATGATGATAATGTTAAGGTTGAGAAAAGAAATTCGATTTGAAAGAAAAGTATAAGCTAAAAACAATCGACAAGAAAAAACCCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCTGATGAAAGGTAAAGATGTATTTCATAGATTTAAAAGACAC-CCATTA-AGAATGAAAGATTTAAGAAAAAAGAAACACAGGGTCAATAAACAGAATTGATTTAGTGTAGCTGGGTATTTTATATTTGTATAGAAGTACAGAGAGATGGATAGAGAGAGGCAGGTAAACATCATGAAGATGGATGATGTAATTGATTAGGAAACATAAAAGAAGGTGATGTAATAAAAGCAATATTATTATTTGTATTAGTAGGAAAAGCAGGAATACTAGATGTTATATTGTCTGATTGATTCACATCATTTTTA] [+] EMBL CD152134 [GGTCATAACTGGTTCACT ATTCAATGTATGTGTATATATTAAAAAAAGTAGTACAAATCAAAATACACAACAGTCGAAGTACAACACACAATGATGATAATGTTAAGGTTGAGAAAAGAAATTCGATTTGAAAGAAAAGTATAAGCTAAAAACAATCGACAGGAAAAAACCCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGCAGTGTTACCTAATAATCAACATCTTTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCTGATGAAAGGTAAAGATGTATTTCATAGATTTAAAAGACAC CCATTA AGAATGAACGATTTAAGAAAAAAGAAACACAGGGTCAATAAACAGAATTGATTTAGTGTAGCTGGGTATATTATATTTGTATAGAAGTACAGAGAGATGGATAGAGAGAGGC ] [+] EMBL CD152129 [ GTTC CTGATTCAATGTATGTGTATATATTAAAAAAAGTAGTACAAATCAAAATACACAACAGTCGAAGTACAACACACAATGATGATAATGTTAAGGTTGAGAAAAGAAATTCGATTTGAAAGAAAAGTATAAGCTAGAAACAATCGACAAGAAAAAACCCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCTGATGAAAGGTAAAGATGTATTTCATAGATTTAAAAGACAC CCATTA AGAATGAAAGATTTAAGAAAAAAGAAACACAGGGTCAATAAACAGAATTGATTTAGTGTAG ] [+] EMBL CD152122 [ GTGTATATATTAAAAAAAGTAGTACAAATCAAAGTACACAACGGTTGAAGTACAACACACAATGATGATAACGTTAAGGTTGAGAAAAGAAATTCGATTTGAACGAAAAGTATAAGCTAAAAACAATCGACAAGAAAA ] [+] EMBL CD152012 [ ATATATTAAAAAAAGTAGTACAAATCAAAATACACAACAGTCGAAGTACAACACACAATGATGATAATGTTAAGGTTGAGAAAAGAAATTCGATTTGAAAGAAAAGTATAAGCTAAAAACAATCGACAAGAAAAAACCCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGTAGTGTTACCTAATAATCATCATCTNTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCTG ] [+] EMBL CD152072 [ CAGTCGAAGTACAGGACACAATGATGATAATGTTAAGGTTGAGAAAAGAAATTCGATTTGAAAGAAAAGTATAAGCTAAAAACAATCGACAAGAAAAAACCCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAACTAACAAACAAACAAACACAAAAAATCGATGGACAAATAGAT ] [-] EMBL CD157636 [ GTATAAGCTAAAAACAATCGACAAGAAAAAACNCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCTGATGAAAGGTAGAGATGTATTTCATAGATTTAAAAGCNNC CCATTA AGAATGnn ] [+] EMBL CD152066 [ tAAACTATCGACAAGAAAGAACCCAAGAGACAGTCTCATAACAATTAATCAATCAATATGTAGTTGTGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAA ] [-] EMBL CD157632 [ CAAGAAAAAACNCAAGAGACAGTCTCATAAAAATTAATCAATCAATATGTAATTGTGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCTGATGAAAGGTAAAGATGTATTTCATAGATTTAAAAGACTCGTCATTAGGGAATGAcc ] [-] EMBL CD152098 [ TGTAGTGTTACCTAATAATCATCATCTTTATTTTGAGGGCAAAAGAAGAACAAACAGACGTACTTACACAAAAAATCGATGGACAAATAGACCTGATGAAAGGTAAAGATGTATTTCATAGATTTAAAAGACAC CCATTA AGAATGAAAGATTTAAGAAAAAAGAAACACAGGGTCAATAAACAGAATTGATTTAGTGTAGCTGGGTATTTTATATTTGTATAGAAGTACAGAGAGATGGATAGAGAGAGGCAGGTAAACATCATGAAGATGGATGATGTAATTGATTAGGAAACATAAAAGAAGGTGATGTAATAAAAGCAATATTATTATTTGTATTAGTAGGAAAAGCAGGAATACTAGATGTTATATTGTCTGATTGATTCACATCATTTTTA] [-] EMBL CD139724 [ TACCTAATAATCATCATC TTATTTTGAGGGCAAAAGAAGAACAAACAAACAAACAAACACAAAAAATCGATGGACAAATAGATCAGATGAAAGGTAAAGATGTATTTCATAGATTTAAAAGACAC CCATTA AGAATGAAAGATTTAAGAAAAAAGAAACACAGGGTCAATAAACAGAATTGATTTAGTGTAGCTGGGTATTTTATATTTGTATAGAAGTACAGAGAGATGGATAGAGAGAGGCAGGTAAACATCATGAAGATGGATGAT ] [-] EMBL CD152053 [ TGTATTTCATAGATTAATAAGACAC CCATTA AGAATGAAAGATTTAAGAAAAAAGAAACACAGGGTCAATAAACAGAATTGATTTAGTGTAGCTGGGTATTTTATATTTGTATAGAAGTACAGAGAGATGGATAGAGAGAGGCAGGTAAACATCATGAAGATGAACGATGTAATTGATTAGGAAACATAAAAGAAGGTGATGTAATAAAAGCAATATTATTATTTGTATTAGTAGGAAAAGCAGGAATACTAGATGTCATtt ] [-] EMBL CD152021 [ TAAGAAAAGAGATACACAGGGTCGAT AACAGAATTGATTTAGTGTAGCTGGGTATTTTATATTTGTATAGAAGTACAGAGAGATGGATAGAGAGAGGCAGGTAAACATCATGAAGATGGATGATGTAATTGATTAGGAACCATCTAAGAA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||