These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1152#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence [GTTCGGGTTGCGAGCAAGAGGAGGCGGCCCGGCGAATGAGAGACCTGGAGGAAGCGCTGGGGAGGGCGGAGGAAGAGCGGCGGCGTGTGGTGGAGGAGAAGCAGAAGGAGGCGGCGATTGAGGAGCTGTACAAGGAGGCGCAAGAGGAGATCAAGATGCTTCAGGAGGCTCTGAGGGGGACGGTCCCCGTGGACGCAGCAGCAAGAGACTTCGAGGACATGTTTTCGGAGCTCGATGAGGTCATTTCCGGGCTGCAGCGCCGCCTGCTGGAACTGTCGCACTCCTACAGCGAGACCAAGAGTCAGCTCAGCGTGGCTCANAAGCAGCTGGTCGAGGCTCCGCCTCCCCCCTCGGAGGAGGAGCGGGTTCAGGAGCTGCAGGACGAGGCGGAGCANCTGAGGAGGCTGCTGGCAGAGGCAGAGAAGAAGAACGTGGAC] [+] EMBL BU805453 [GTTCGGGTTGCGAGCAAGAGGAGGCGGCCCGGCGAATGAGAGACCTGGAGGAAGCGCTGGGGAGGGCGGAGGAAGAGCGGCGGCGTGTGGTGGAGGAGAAGCAGAAGGAGGCGGCGATTGAGGAGCTGTACAAGGAGGCGCAAGAGGAGATCAAGATGCTTCAGGAGGCTCTGAGGGGGACGGTCCCCGTGGACGCAGCAGCAAGAGACTTCGAGGACATGTTTTCGGAGCTCGATGAGGTCATTTCCGGGCTGCAGCGCCGCCTGCTGGAACTGTCGCACTCCTACAGCGAGACCAAGAGTCAGCTCAGCGTGGCTCANAAGCAGCTGGTCGAGGCTCCGCCTCCCCCCTCGGAGGAGGAGCGGGTTCAGGAGCTGCAGGACGAGGCGGAGCANCTGAGGAGGCTGCTGGCAGAGGCAGAGAAGAAGAACGTGGAC] consensusID : consensus_1152#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 319 fasta sequence [AGAGTGTCCGGGAGAACGGCTTCCGCGCTGTTTCCTCCCTCCGCCCGGAGACGCGTGCGCTTCTCGGGGTCTTTTTCGTGTCCAGCGCCCGCCGCGGCCAGCACCAACCCGGGTTCGAGGGAGCGGAGGGCTGCATGGACCGGACCCCATCATGAAGAGCGGCGGCGTGTGGTGGAGGAGAAGCAGAAGGAGGCGGCGATTGAGGAGCTGTACAAGGAGGCGCAAGAGGAGATCAAGATGCTTCAGGAGGCTCTGAGGGGGACGGTCCCCGTGGACGCAGCAGCAAGAGACTTCGAGGACATGAAGGCGGAGCTGGATG] [+] EMBL FR0064025 [AGAGTGTCCGGGAGAACGGCTTCCGCGCTGTTTCCTCCCTCCGCCCGGAGACGCGTGCGCTTCTCGGGGTCTTTTTCGTGTCCAGCGCCCGCCGCGGCCAGCACCAACCCGGGTTCGAGGGAGCGGAGGGCTGCATGGACCGGACCCCATCATGAAGAGCGGCGGCGTGTGGTGGAGGAGAAGCAGAAGGAGGCGGCGATTGAGGAGCTGTACAAGGAGGCGCAAGAGGAGATCAAGATGCTTCAGGAGGCTCTGAGGGGGACGGTCCCCGTGGACGCAGCAGCAAGAGACTTCGAGGACATGAAGGCGGAGCTGGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1152#0 ------------------------------------------------------------ consensus_1152#1 AGAGTGTCCGGGAGAACGGCTTCCGCGCTGTTTCCTCCCTCCGCCCGGAGACGCGTGCGC 60 consensus_1152#0 -------------------GTTCGGGTTGCGA-GCAAGAGGAGGCGGCCCGGCGAATGAG 40 consensus_1152#1 TTCTCGGGGTCTTTTTCGTGTCCAGCGCCCGCCGCGGCCAGCACCAACCCGG-GTTCGAG 119 ** * * ** ** * * ***** * *** consensus_1152#0 AGACCTGGAGGAAGCGCTGGGGAGGGCGGAG---GAAGAGCGGCGGCGTGTGGTGGAGGA 97 consensus_1152#1 GGAGCGGAGGGCTGCATGGACCGGACCCCATCATGAAGAGCGGCGGCGTGTGGTGGAGGA 179 ** * * ** ** * * * * ************************** consensus_1152#0 GAAGCAGAAGGAGGCGGCGATTGAGGAGCTGTACAAGGAGGCGCAAGAGGAGATCAAGAT 157 consensus_1152#1 GAAGCAGAAGGAGGCGGCGATTGAGGAGCTGTACAAGGAGGCGCAAGAGGAGATCAAGAT 239 ************************************************************ consensus_1152#0 GCTTCAGGAGGCTCTGAGGGGGACGGTCCCCGTGGACGCAGCAGCAAGAGACTTCGAGGA 217 consensus_1152#1 GCTTCAGGAGGCTCTGAGGGGGACGGTCCCCGTGGACGCAGCAGCAAGAGACTTCGAGGA 299 ************************************************************ consensus_1152#0 CATGTTTTCGGAGCTCGATGAGGTCATTTCCGGGCTGCAGCGCCGCCTGCTGGAACTGTC 277 consensus_1152#1 CATGAAGGCGGAGCTGGATG---------------------------------------- 319 **** ******* **** consensus_1152#0 GCACTCCTACAGCGAGACCAAGAGTCAGCTCAGCGTGGCTCANAAGCAGCTGGTCGAGGC 337 consensus_1152#1 ------------------------------------------------------------ consensus_1152#0 TCCGCCTCCCCCCTCGGAGGAGGAGCGGGTTCAGGAGCTGCAGGACGAGGCGGAGCANCT 397 consensus_1152#1 ------------------------------------------------------------ consensus_1152#0 GAGGAGGCTGCTGGCAGAGGCAGAGAAGAAGAACGTGGAC 437 consensus_1152#1 ---------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |