These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1279#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 620 fasta sequence [GCTTTTTTTTATTTTTTATTTTTTTAGATTTTCAGCGTAGCTGCAGTTAAATGTTAAAAGCTAGGATGTCACGCAGATGGTTAATTTTTTTTTTATTGGGGATTCAAATGGACTGAGTCATGGGGGTGGAAATGGACTTAGTGGTTAGCGGAAGATCTCGGGAGCGGCACGAAAACGGACGGAAGCGGAGCGGGACCAGTGCGGAACCAGGCAGTTCAGGACCAGAGGGCGTGGGCGGACCATTGTTAGAACCAGGCAGGACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGTACCAGGCCATCTTCTCCCACGCCGCAGGCGACAACGGCACCCTGCTGAGCTTCTCCGAGGGAGACGTCATCACCCTGCTCGTGCCCGAAGCCCGCGACGGCTGGCACTACGGCGAGAACGAAAAGAACAAGATGCGCGGCTGGTTCCCCTTCTCCTACACGCGCGTCCTGCCCGAGAGCGACAGCGAGAAGCTCAAAGTGAACCTGCATCACGGGAAAAGCAGCAGCACGGGGAACCTGCTGGAGAACGACGGCTCGCTGCCCACGCCCGACTACGGCCTGACCGCCCGTCTGCTGGCCCAGAGTCTTGCACAGACCCGCCCACGT] [+] EMBL BU806448 [GCTTTTTTTTATTTTTTATTTTTTTAGATTTTCAGCGTAGCTGCAGTTAAATGTTAAAAGCTAGGATGTCACGCAGATGGTTAATTTTTTTTTTATTGGGGATTCAAATGGACTGAGTCATGGGGGTGGAAATGGACTTAGTGGTTAGCGGAAGATCTCGGGAGCGGCACGAAAACGGACGGAAGCGGAGCGGGACCAGTGCGGAACCAGGCAGTTCAGGACCAGAGGGCGTGGGCGGACCATTGTTAGAACCAGGCAGGACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGTACCAGGCCATCTTCTCCCACGCCGCAGGCGACAACGGCACCCTGCTGAGCTTCTCCGAGGGAGACGTCATCACCCTGCTCGTGCCCGAAGCCCGCGACGGCTGGCACTACGGCGAGAACGAAAAGAACAAGATGCGCGGCTGGTTCCCCTTCTCCTACACGCGCGTCCTGCCCGAGAGCGACAGCGAGAAGCTCAAAGTGAACCTGCATCACGGGAAAAGCAGCAGCACGGGGAACCTGCTGGAGAACGACGGCTCGCTGCCCACGCCCGACTACGGCCTGACCGCCCGTCTGCTGGCCCAGAGTCTTGCACAGACCCGCCCACGT] consensusID : consensus_1279#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence [AATGGACTTATTGGTTAGCGGAAGATCTTGCGAGCGGCACGAAAACGGACGGAAGCGGAGCGGGACCAGTGCGGAACCAGGCAGTTCAGGACCAAAGGGTGTGGGCGGACCAGTGCAGAACCAGGCTGGACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGTACCTGGCATAACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGAAAAAAAAATGGATTTTTGATAGAAGCAAAGAGGTTGGTTCGACTTTA] [+] EMBL FR0059103 [AATGGACTTATTGGTTAGCGGAAGATCTTGCGAGCGGCACGAAAACGGACGGAAGCGGAGCGGGACCAGTGCGGAACCAGGCAGTTCAGGACCAAAGGGTGTGGGCGGACCAGTGCAGAACCAGGCTGGACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGTACCTGGCATAACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGAAAAAAAAATGGATTTTTGATAGAAGCAAAGAGGTTGGTTCGACTTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1279#0 GCTTTTTTTTATTTTTTATTTTTTTAGATTTTCAGCGTAGCTGCAGTTAAATGTTAAAAG 60 consensus_1279#1 ------------------------------------------------------------ consensus_1279#0 CTAGGATGTCACGCAGATGGTTAATTTTTTTTTTATTGGGGATTCAAATGGACTGAGTCA 120 consensus_1279#1 ------------------------------------------------------------ consensus_1279#0 TGGGGGTGGAAATGGACTTAGTGGTTAGCGGAAGATCTCGGGAGCGGCACGAAAACGGAC 180 consensus_1279#1 ----------AATGGACTTATTGGTTAGCGGAAGATCTTGCGAGCGGCACGAAAACGGAC 50 ********** ***************** * ******************* consensus_1279#0 GGAAGCGGAGCGGGACCAGTGCGGAACCAGGCAGTTCAGGACCAGAGGGCGTGGGCGGAC 240 consensus_1279#1 GGAAGCGGAGCGGGACCAGTGCGGAACCAGGCAGTTCAGGACCAAAGGGTGTGGGCGGAC 110 ******************************************** **** ********** consensus_1279#0 CATTGTTAGAACCAGGCAGGACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGTACCAGG 300 consensus_1279#1 CAGTGC-AGAACCAGGCTGGACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGTACCTGG 169 ** ** ********** *************************************** ** consensus_1279#0 CC--ATCTTCTCCCACGCCGCAGGCG-ACAACGGCACCCTGCTGAGCTTCTCCGAGGGAG 357 consensus_1279#1 CATAACAGGACCAGAGGGCGTGGGAGGACCAGTGCGGAAAAAAAAATGGATTTTTGATAG 229 * * * * * ** ** * ** * ** * * * ** consensus_1279#0 ACGTCATCACCCTGCTCGTGCCCGAAGCCCGCGACGGCTGGCACTACGGCGAGAACGAAA 417 consensus_1279#1 AAGCAAAGAGGTTGGTTCGACTTTA----------------------------------- 254 * * * * ** * * * consensus_1279#0 AGAACAAGATGCGCGGCTGGTTCCCCTTCTCCTACACGCGCGTCCTGCCCGAGAGCGACA 477 consensus_1279#1 ------------------------------------------------------------ consensus_1279#0 GCGAGAAGCTCAAAGTGAACCTGCATCACGGGAAAAGCAGCAGCACGGGGAACCTGCTGG 537 consensus_1279#1 ------------------------------------------------------------ consensus_1279#0 AGAACGACGGCTCGCTGCCCACGCCCGACTACGGCCTGACCGCCCGTCTGCTGGCCCAGA 597 consensus_1279#1 ------------------------------------------------------------ consensus_1279#0 GTCTTGCACAGACCCGCCCACGT 620 consensus_1279#1 ----------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |