Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1498 cluster # 1498       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1498#0 length = 818 sequences # 3  

consensusID : consensus_1498#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 818
fasta sequence
                              [GCACGAGCTGAGCAGTCAGGGGTCCACACAGCGGCAGGATTATGGCACCAGGAAAGAAGGGAATTTTGGAGCGTCTCAACGCAGGCCAGGTTGTGATCGGCGATGGAGGGTTCGTGTTTGCTCTGGAGAAGAGAGGCTACGTGAAGGCCGGTCCCTGGACCCCAGAAGCCACAAAGGAACATCCCGAAGCAGTGCGGCAGCTGCACAGGGAGTTCCTGAGGGCGGGGGCCAACGTCATGCAGACCTTCACCTTCTACGCCAGCGATGACAAGCTGGAGAACAGGGGCAACAAACTCACCTACACTGGAGCTCAGATCAACGAGGCCGCCTGCGATCTGGCCCGGGAGGTTGCCAATGAGGGCGACGCCCTGGTTGCTGGGGGAGTGTCTCAGACCCCATCTTACCTGAGCTGTAAGAGTGAGAAAGAAGTGAAGGACATCTTCAAGAGACAACTGGATGTGTTTGTGAAGAAGAACGTGGACTTCCTGATTGCTGAGTACTTTGAGCATGTTGAAGAGGCCGTGTGGGCTGTGGAGGTGTTGAAGGCGACAGGAAAGCCTGTTGCCGCTTCTCTGTGCATTGGACCCAAGGGAGACATGCACGGCGTGTCCCCAGCAGAGTGCGCCGTCAGGCTGGTCAAAGCTGGTGCCCAGATCGTTGGAGTCAACTGCCACTTTGACCCCATGACCTGCGTGGAAGCTGTCAAGATGATGAAAGAGGGAGTGGAGAAGGCCGGGCTCAAGGCTCACTACATGGTGCAGCCCCTGGCCTTCCACACCCCCGACTGCAACTGTCAGGGATTCATCGATCTGCCAGAA]

[+] EMBL CA330905             [GCACGAGCTGAGCAGTCAGGGGTCCACACAGCGGCAGGATTATGGCACCAGGAAAGAAGGGAATTTTGGAGCGTCTCAACGCAGGCCAGGTTGTGATCGGCGATGGAGGGTTCGTGTTTGCTCTGGAGAAGAGAGGCTACGTGAAGGCCGGTCCCTGGACCCCAGAAGCCACAAAGGAACATCCCGAAGCAGTGCGGCAGCTGCACAGGGAGTTCCTGAGGGCGGGGGCCAACGTCATGCAGACCTTCACCTTCTACGCCAGCGATGACAAGCTGGAGAACAGGGGCAACAAACTCACCTACACTGGAGCTCAGATCAACGAGGCCGCCTGCGATCTGGCCCGGGAGGTTGCCAATGAGGGCGACGCCCTGGTTGCTGGGGGAGTGTCTCAGACCCCATCTTACCTGAGCTGTAAGAGTGAGAAAGAAGTGAAGGACATCTTCAAGAGACAACTG                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA333364             [                                     GATTATGGCACCAGGAAAGAAGGGAATTTTGGAGCGTCTCAACGCAGGCCAGGTTGTGATCGGCGATGGAGGGTTCGTGTTTGCTCTGGAGAAGAGAGGCTACGTGAAGGCCGGTCCCTGGACCCCAGAAGCCACAAAGGAACATCCCGAAGCAGTGCGGCAGCTGCACAGGGAGTTCCTGAGGGCGGGGGCCAACGTCATGCAGACCTTCACCTTCTACGCCAGCGATGACAAGCTGGAGAACAGGGGCAACAAACTCACCTACACTGGAGCTCAGATCAACGAGGCCGCCTGCGATCTGGCCCGGGAGGTTGCCAATGAGGGCGACGCCCTGGTTGCTGGGGGAGTGTCTCAGACCCCATCTTACCTGAGCTGTAAGAGTGAGAAAGAAGTGAAGGACATCTTCAAGAGACAACTGGATGTGTTTGTGAAGAAGAACGTGGACTTCCTGATTGCTGAGTACTTTGAGCATGTTGAAGAGGCCGTGTGGGCTGTGGAGGTGTTGAAGGCGACAGGAAAGCCTGTTGCCGCTTCTCTGTGCATTGGACCCAAGGGAGACATGCACGGCGTGTCCCCAGCAGAGTGCGCCGTCAGGCTGGTCAAAGCTGGTGCCCAGATCGTT                                                                                                                                                               ]
[+] EMBL CA330150             [                                                                                                                                                                                                                               gcacGAGAACGTCATGCAGACCTTCACCTTCTACGCCAGCGATGACAAGCTGGAGAACAGGGGCAACAAACTCACCTACACTGGAGCTCAGATCAACGAGGCCGCCTGCGATCTGGCCCGGGAGGTTGCCAATGAGGGCGACGCCCTGGTTGCTGGGGGAGTGTCTCAGACCCCATCTTACCTGAGCTGTAAGAGTGAGAAAGAAGTGAAGGACATCTTCAAGAGACAACTGGATGTGTTTGTGAAGAAGAACGTGGACTTCCTGATTGCTGAGTACTTTGAGCATGTTGAAGAGGCCGTGTGGGCTGTGGAGGTGTTGAAGGCGACAGGAAAGCCTGTTGCCGCTTCTCTGTGCATTGGACCCAAGGGAGACATGCACGGCGTGTCCCCAGCAGAGTGCGCCGTCAGGCTGGTCAAAGCTGGTGCCCAGATCGTTGGAGTCAACTGCCACTTTGACCCCATGACCTGCGTGGAAGCTGTCAAGATGATGAAAGAGGGAGTGGAGAAGGCCGGGCTCAAGGCTCACTACATGGTGCAGCCCCTGGCCTTCCACACCCCCGACTGCAACTGTCAGGGATTCATCGATCTGCCAGAA]


>consensus_1498#0 GCACGAGCTGAGCAGTCAGGGGTCCACACAGCGGCAGGATTATGGCACCAGGAAAGAAGG GAATTTTGGAGCGTCTCAACGCAGGCCAGGTTGTGATCGGCGATGGAGGGTTCGTGTTTG CTCTGGAGAAGAGAGGCTACGTGAAGGCCGGTCCCTGGACCCCAGAAGCCACAAAGGAAC ATCCCGAAGCAGTGCGGCAGCTGCACAGGGAGTTCCTGAGGGCGGGGGCCAACGTCATGC AGACCTTCACCTTCTACGCCAGCGATGACAAGCTGGAGAACAGGGGCAACAAACTCACCT ACACTGGAGCTCAGATCAACGAGGCCGCCTGCGATCTGGCCCGGGAGGTTGCCAATGAGG GCGACGCCCTGGTTGCTGGGGGAGTGTCTCAGACCCCATCTTACCTGAGCTGTAAGAGTG AGAAAGAAGTGAAGGACATCTTCAAGAGACAACTGGATGTGTTTGTGAAGAAGAACGTGG ACTTCCTGATTGCTGAGTACTTTGAGCATGTTGAAGAGGCCGTGTGGGCTGTGGAGGTGT TGAAGGCGACAGGAAAGCCTGTTGCCGCTTCTCTGTGCATTGGACCCAAGGGAGACATGC ACGGCGTGTCCCCAGCAGAGTGCGCCGTCAGGCTGGTCAAAGCTGGTGCCCAGATCGTTG GAGTCAACTGCCACTTTGACCCCATGACCTGCGTGGAAGCTGTCAAGATGATGAAAGAGG GAGTGGAGAAGGCCGGGCTCAAGGCTCACTACATGGTGCAGCCCCTGGCCTTCCACACCC CCGACTGCAACTGTCAGGGATTCATCGATCTGCCAGAA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)