Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1728 cluster # 1728       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1728#0 length = 651 sequences # 3  

consensusID : consensus_1728#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 651
fasta sequence
                              [GGCAGGAAACCGCTCAACCGAATTCGTCGTCTTGGTCCGAGTTCCCGGTCCGAGCTAAAGTTTTGGAGCGGACTGACGGAGTCGAGCAGAGCCCTTAATGGATCCACGACACCCAGCGGATCTTTAAAGTTTTCACGGAACCCAGAGAGACGCGTTATTCGCTTCACTCCCACTTCTATTAAAAAAAGCTTC-TTTTTTTTTTTCAAAAAATCCTTTTGGAAGATATCCACTCGCGATTTGGACCTG-TTTTTTCACAAGTGATATTCAGGTTCGGAGACAAATGAAAGCAAACAGAAACTCACTAACGGGGGAAACAGCTGACTGACGCCAGGTCTCGCAACCGAAAGGACGAATACGTCACTCCCGCACGATCGACTCCAGTTCTCCCAGTAAAGGTTCCGAAGGTGGAAGCTTTCCCTTTTGTCCAGTCGGAATCTCCACTGCTTCTTCCTGTTGACTTGTTGTCAACTCAAATCCCAAGACCAACACAGATATGATCAAAACCAGCTCTCAACGATGTCTCAAGAGGCTTCTGGAGGAGCCCCCGGATAATGTGGCCAAACGCAAACCAGCGCCTCAGGTTCCACACCCTCCCACCACTGGTCTGTCACCTTTCCCCAGAACCAGAAACCCCTCCCCAAAATCATCTCA]

[+] EMBL CA591361             [GGCAGGAAACCGCTCAACCGAATTCGTCGTCTTGGTCCGAGTTCCCGGTCCGAGCTAAAGTTTTGGAGCGGACTGACGGAGTCGAGCAGAGCCCTTAATGGATCCACGACACCCAGCGGATCTTTAAAGTTTTCACGGAACCCAGAGAGACGCGTTATTCGCTTCACTCCCACTTCTATTAAAAAAAGCTTCTTTTTTTTTTTTCAAAAAATCCTTTTGGAAGATATCCACTCGCGATTTGGACCTGTTTTTTTCACAAGTGATATTCAGGTTCGGAGACAAATGAAAGCAAACAGAAACTCACTAACGGGGGAAACAGCTGACTGACGCCAGGTCTCGCAACCGAAAGGACGAATACGTCACTCCCGCACGATCGACTCCAGTTCTCCCAGTAAAGGTTCCGAAGGTGGAAGCTTTCCCTTTTGTCCAGTCGGAATCTCCACTGCTTCTTCCTGTTGACTTGTTGTCAACTCAAATCCCAAGACCAACACAGATATGATCAAAACCAGCTCTCAACGATGTCTCAAGAGGCTTCTGGAGGAGCCCCCGGATAATGTGGCCAAACGTAAACCAGCGCCTCAGGTTCCACACCCTCCCACCACTGGTCTGTCACC                                       ]
[+] EMBL CA589028             [                                                     GCTAAAGTTTTGGAGCGGACTGACGGAGTCGAGCAGAGCCCTTAATGGATCCACGACACCCAGCGGATCTTTAAAGTTTTCACGGAACCCAGAGAGACGCGTTATTCGCTTCACTCCCACTTCTATTAAAAAAAGCTTC TTTTTTTTTTTCAAAAAATCCTTTTGGAAGATATCCACTCGCGATTTGGACCTG TTTTTTCACAAGTGATATTCAGGTTCGGAGACAAATGAAAGCAAACAGAAACTCACTAACGGGGGAAACAGCTGACTGACGCCAGGTCTCGCAACCGAAAGGACGAATACGTCACTCCCGCACGATCGACTCCAGTTCTCCCAGTAAAGGTTCCGAAGGTGGAAGCTTTCCCTTTTGTCCAGTCGGAATCTCCACTGCTTCTTCCTGTTGACTTGTTGTCAACTCAAATCCCAAGACCAACACAGATATGATCAAAACCAGCTCTCAACGATGTCTCAAGAGGCTTCTGGAGGAGCCCCCGGATAATGTGGCCAAACGCAAACCAGCGCCTCAGGTTCCACACCCTCCCACCACTGGTCTATCACCTTTCCCCAGAACCAGAAACCCCTCCCCAAAATCATCTCA]
[+] EMBL FR0058686            [                                                                                                      TCCACGACACCCAGCGGATCTTTAAAGTTTTCACGGAGCCCAGAGAGACGCGTTATTCGCTTCACTCCCACTTCTATTAAAAAAAGCTTC TTTTTTTTTTTCAAAAAACCCTTTGGAAAGATATCCACTCGCGATTGGGACCTG TTTTTTCACAAGTGATATTCAGGTTCGGAGACAAATGAAGGCAAACAGAACCTCACTAACGGGGGAAACAGCTGACTGACGCCAGGTTTCGCAACCGAAAGGACGAATACGTCACTCCCGCACGATCGACTC                                                                                                                                                                                                                                                                                 ]


>consensus_1728#0 GGCAGGAAACCGCTCAACCGAATTCGTCGTCTTGGTCCGAGTTCCCGGTCCGAGCTAAAG TTTTGGAGCGGACTGACGGAGTCGAGCAGAGCCCTTAATGGATCCACGACACCCAGCGGA TCTTTAAAGTTTTCACGGAACCCAGAGAGACGCGTTATTCGCTTCACTCCCACTTCTATT AAAAAAAGCTTCTTTTTTTTTTTCAAAAAATCCTTTTGGAAGATATCCACTCGCGATTTG GACCTGTTTTTTCACAAGTGATATTCAGGTTCGGAGACAAATGAAAGCAAACAGAAACTC ACTAACGGGGGAAACAGCTGACTGACGCCAGGTCTCGCAACCGAAAGGACGAATACGTCA CTCCCGCACGATCGACTCCAGTTCTCCCAGTAAAGGTTCCGAAGGTGGAAGCTTTCCCTT TTGTCCAGTCGGAATCTCCACTGCTTCTTCCTGTTGACTTGTTGTCAACTCAAATCCCAA GACCAACACAGATATGATCAAAACCAGCTCTCAACGATGTCTCAAGAGGCTTCTGGAGGA GCCCCCGGATAATGTGGCCAAACGCAAACCAGCGCCTCAGGTTCCACACCCTCCCACCAC TGGTCTGTCACCTTTCCCCAGAACCAGAAACCCCTCCCCAAAATCATCTCA



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)