Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1861 cluster # 1861       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1861#0 length = 929 sequences # 3  
consensusID : consensus_1861#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 929
fasta sequence 
                              [GAACCACGATGGCGGTCAACAACTGCGTCAAGTATCTTCTCTTCTTCTTCAACCTGCTCTTCTGGATCAGTGGTTGCATCATTCTGGGCGTCGCCATCTACCTGAAGGTCAACAAAGATGGACACTCGATTGCAACTGAAGCTCTGCCGGGCGTCGACCTGATGATCGCCATCGGCGTCATCATCTTGGTACTCGGCTTCCTGGGCTGCTGCGGCGCCATCAGAGAGAACCGCTGCATGCTGCTGCTGTTCTTCATCAGCCTTCTCATCATCTTCATCCTCCTGGTGGCGGCGGGCATCGTGGGAGCCGTTGGCGAGAGCAAGGTGCAGGACTTCTTGAAGAAACATCTGGAGGAGAAGTTCGTCCCTCTGTCAGACAAGTCCGAAAGCGTGAAGCAGGACCTGGAGAACCTGCAGCGTGAGCTCAAGTGCTGCGGTCTCTTCAAGGGTCCAGCCGACTG-GACCAAAATCCCCGACTCCTGCCGCTGCAACGCCACGGAGCCGGACTGCTCCAGCTCCAAGCTTTATTCCACGAACTGCTACGAGAAGAGCGTGGAATGGATGAGGAATAATCTGGAGGTGGTGCTGGGCATCGCCTTCGCCATCGCCATCCTGCTGATTTTCGGGATGGTCATGGCCATGATGCTCTACTGTCAGATTGGCCGGAAGGATGGCGCCACCACAGCCTGAGTTTGGCCACGCCCCTCCCTGCCTGCAACAGCCAATCAGCAATGTTTAATGGTCCTGTCGTGTTTTTACTGTGAAGGAACTGATGGTATTGATTACTTGTCTTGCTGTTTTGAAGAGGTTTGAGATGTTAAGAGTCTGAATATACTGAAGAGATCACAGAATATCAAATCTGTTCCTGACACTAAAATCTGATTTTTGATTAGGATTTAAAAACCTTAAAATCAGTGAATTTCCTGTTTT]

[+] EMBL BU806038             [GAACCACGATGGCGGTCAACAACTGCGTCAAGTATCTTCTCTTCTTCTTCAACCTGCTCTTCTGGATCAGTGGTTGCATCATTCTGGGCGTCGCCATCTACCTGAAGGTCAACAAAGATGGACACTCGATTGCAACTGAAGCTCTGCCGGGCGTCGACCTGATGATCGCCATCGGCGTCATCATCTTGGTACTCGGCTTCCTGGGCTGCTGCGGCGCCATCAGAGAGAACCGCTGCATGCTGCTGCTGTTCTTCATCAGCCTTCTCATCATCTTCATCCTCCTGGTGGCGGCGGGCATCGTGGGAGCCGTTGGCGAGAGCAAGGTGCAGGACTTCTTGAAGAAACATCTGGAGGAGAAGTTCGTCCCTCTGTCAGACAAGTCCGAAAGCGTGAAGCAGGACCTGGAGAACCTGCAGCGTGAGCTCAAGTGCTGCGGTCTCTTCAAGGGTCCAGCCGACTG GAGCAAAATCCCCGACTCCTGCCGCTGCAACGCCACGGAGCCGGACTGCTGCAGCTCCCAGCTg                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA846726             [                                                                        GTTGCATCATTCTGGGCGTCGCCATCTACCTGAAGGTCAACAAAGATGGACACTCGATTGCAACTGAAGCTCTGCCGGGCGTCGACCTGATGATCGCCATCGGCGTCATCATCTTGGTACTCGGCTTCCTGGGCTGCTGCGGCGCCATCAGAGAGAACCGCTGCATGCTGCTGCTGTTCTTCATCAGTCTTCTCATCATCTTCATCCTCCTGGTGGCGGCGGGCATCGTGGGAGCCGTTGGCGAGAGCAAGGTGCAGGACTTCTTGAAGAAACATCTGGAGGAGAAGTTCGTCCCTCTGTCAGACAAGTCCGAAAGCGTGAAGCAGGACCTGGAGAACCTGCAGCGTGAGCTCAAGTGCTGCGGTCTCTTCAAGGGTCCAGCCGACTG GACCAAAATCCCCGACTCCTGCCGCTGCAACGCCACGGAGCCGGACTGCTCCAGCTCCAAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA846570             [                                                                                                                                                                                                                                                                                                                                                                                                                                    AGCTCAAGTGCTGCGGTCTCTTCAAGGGTCCAGCCGACTGTGACCAAAATCCCCGACTCCTGCCGCTGCAACGCCACGGAGCCGGACTGCTCCAGCTCCAAGCTTTATTCCACGAACTGCTACGAGAAGAGCGTGGAATGGATGAGGAATAATCTGGAGGTGGTGCTGGGCATCGCCTTCGCCATCGCCATCCTGCTGATTTTCGGGATGGTCATGGCCATGATGCTCTACTGTCAGATTGGCCGGAAGGATGGCGCCACCACAGCCTGAGTTTGGCCACGCCCCTCCCTGCCTGCAACAGCCAATCAGCAATGTTTAATGGTCCTGTCGTGTTTTTACTGTGAAGGAACTGATGGTATTGATTACTTGTCTTGCTGTTTTGAAGAGGTTTGAGATGTTAAGAGTCTGAATATACTGAAGAGATCACAGAATATCAAATCTGTTCCTGACACTAAAATCTGATTTTTGATTAGGATTTAAAAACCTTAAAATCAGTGAATTTCCTGTTTT]




>consensus_1861#0
GAACCACGATGGCGGTCAACAACTGCGTCAAGTATCTTCTCTTCTTCTTCAACCTGCTCT
TCTGGATCAGTGGTTGCATCATTCTGGGCGTCGCCATCTACCTGAAGGTCAACAAAGATG
GACACTCGATTGCAACTGAAGCTCTGCCGGGCGTCGACCTGATGATCGCCATCGGCGTCA
TCATCTTGGTACTCGGCTTCCTGGGCTGCTGCGGCGCCATCAGAGAGAACCGCTGCATGC
TGCTGCTGTTCTTCATCAGCCTTCTCATCATCTTCATCCTCCTGGTGGCGGCGGGCATCG
TGGGAGCCGTTGGCGAGAGCAAGGTGCAGGACTTCTTGAAGAAACATCTGGAGGAGAAGT
TCGTCCCTCTGTCAGACAAGTCCGAAAGCGTGAAGCAGGACCTGGAGAACCTGCAGCGTG
AGCTCAAGTGCTGCGGTCTCTTCAAGGGTCCAGCCGACTGGACCAAAATCCCCGACTCCT
GCCGCTGCAACGCCACGGAGCCGGACTGCTCCAGCTCCAAGCTTTATTCCACGAACTGCT
ACGAGAAGAGCGTGGAATGGATGAGGAATAATCTGGAGGTGGTGCTGGGCATCGCCTTCG
CCATCGCCATCCTGCTGATTTTCGGGATGGTCATGGCCATGATGCTCTACTGTCAGATTG
GCCGGAAGGATGGCGCCACCACAGCCTGAGTTTGGCCACGCCCCTCCCTGCCTGCAACAG
CCAATCAGCAATGTTTAATGGTCCTGTCGTGTTTTTACTGTGAAGGAACTGATGGTATTG
ATTACTTGTCTTGCTGTTTTGAAGAGGTTTGAGATGTTAAGAGTCTGAATATACTGAAGA
GATCACAGAATATCAAATCTGTTCCTGACACTAAAATCTGATTTTTGATTAGGATTTAAA
AACCTTAAAATCAGTGAATTTCCTGTTTT

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)