Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 1943 cluster # 1943       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1943#0 length = 716 sequences # 3  
consensusID : consensus_1943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 716
fasta sequence 
                              [GAATATTTTACGCATTATGATTCCTGGATAAGAGGCCGCCGTCTGTGTTGGTCCGCTCATCGTGTGTCAGCAGACGAGCCGACCTTATGAACGTCATGCCAGAAAGTGTCTCTTGGTTTATTTAGCATTAGTTTAAGATGACTAGCTCTTGAGGGAAGATGGATACTGACTAATTTAAACACTGAAAGTGTGGAGACAAACGGCGCACGGAGAGTCACTTCAGTCTTGAACTTTCTAGATTTTGTAGCCCGTTGCGAGTGATGGAGGTGATCACCCTGAGCTCCGAGAGTGAGGAAGATGATTCTGATGTGGAAATAATCGCTCAGTACAGCAACTTCTTGAGCCAAACCGACCCACTTCCCCAGCAGGATGGCAAAGTTTGCGCCGACGCCCCGAACGTGAACGCGCTAGTGCAAAACATTGACGTCACAGATTCAAAACGGATCCTCGCAGATCTAAAGAGTCCCATCAAGCCTGATTTTAACGCCAGACCCATAGTAGACCTGTCTGACATCGACGCAGATTTTAAAATACAAAACGTCTGCGGCTCCACGACTGAACAAGAGAACGTCTTCCAGAGAAACGCTTCAGCAGATCCCCCCAGGCCAACGCTCCAGAGGAGCAGTGCGGACCCCCAAACACAAATTCATACACTGACTCATGAGGAACTCTTCCCATTTGTGACTCTAACACGCCTGCCTTTTATTGAAGGGCAC]

[+] EMBL CA590719             [GAATATTTTACGCATTATGATTCCTGGATAAGAGGCCGCCGTCTGTGTTGGTCCGCTCATCGTGTGTCAGCAGACGAGCCGACCTTATGAACGTCATGCCAGAAAGTGTCTCTTGGTTTATTTAGCATTAGTTTAAGATGACTAGCTCTTGAGGGAAGATGGATACTGACTAATTTAAACACTGAAAGTGTGGAGACAAACGGCGCACGGAGAGTCACTTCAGTCTTGAACTTTCTAGATTTTGTAGCCCGTTGCGAGTGATGGAGGTGATCACCCTGAGCTCCGAGAGTGAGGAAGATGATTCTGATGTGGAAATAATCGCTCAGTACAGCAACTTCTTGAGCCAAACCGACCCACTTCCCCAGCAGGATGGCAAAGTTTGCGCCGACGCCCCGAACGTGAACGCGCTAGTGCAAAACATTGACGTCACAGATTCGAAACGGATCCTCGCAGATCTAAAGAGTCCCATCAAGCCTGATTTTAACGCCAGACCCATAGTAGACCTGTCTGACATCGACGCAGATTTTAAAATACAAAACGTCTGCGGCTCCACGACTGAACAAGAGAACGTCTTCCAGAGAAACGCTTCAGCAGATCCCCCC                                                                                                                  ]
[+] EMBL CA591202             [                        TGGATAAGAGGCCGCCGTCTGTGTTGGTCCGCTCATCGTGTGTCAGCAGACGAGCCGACCTTATGAACGTCATGCCAGAAAGTGTCTCTTGGTTTATTTAGCATTAGTTTAAGATGACTAGCTCTTGAGGGAAGATGGATACTGACTAATTTAAACACTGAAAGTGTGGAGACAAATGGCGCACGGAGAGTCACTTCAGTCTTGAACTTTCTAGATTTTGTAGCCCGTTGCGAGTGATGGAGGTGATCACCCTGAGCTCCGAGAGTGAGGAAGATGATTCTGATGTGGAAATAATCGCTCAGTACAGCAACTTCTTGAGCCAAACCGACCCACTTCCCCAGCAGGATGGCAAAGTTTGCGCCGACGCCCCGAACGTGAACGCGCTAGTGCAAAACATTGACGTCACAGATTCAAAACGGATCCTCGCAGATCTAAAGAGTCCCATCAAGCCTGATTTTAACGCCAGACCCATAGTAGACCTGTCTGACATCGACGCAGATTTTAAAATACAAAACGTCTGCGGCTCCACGACTGAACAAGAGAACGTCTTCCAGAGAAACGCTTCAGCAGATCCCCCCAGGCCAACGCTCCAGAGGAGCAGTGCGGACCCCCAAACACAAATTCATAC                                                                ]
[+] EMBL FR0059516            [                                                                                                                                                                                                                                                                                                                                                                                                                         AGAACGGAACATTGACGTCACAGATTCAAAACGGATCCTCGCAGATCTAAAGAGTCCCATCAAGCCTGATTTTAACGCCAGACCCATAGTAGACCTGTCTGACATCGACGCAGATTTTAAAATACAAAACGTCTGCGGCTCCACGACTGAACAAGAGAACGTCTTCCAGAGAAACGCTTCAGCAGATCCCCCCAGGCCAACGCTCCAGAGGAGCAGTGCGGACCCCCAAACACAAATTCATACACTGACTCATGAGGAACTCTTCCCATTTGTGACTCTAACACGCCTGCCTTTTATTGAAGGGCAC]




>consensus_1943#0
GAATATTTTACGCATTATGATTCCTGGATAAGAGGCCGCCGTCTGTGTTGGTCCGCTCAT
CGTGTGTCAGCAGACGAGCCGACCTTATGAACGTCATGCCAGAAAGTGTCTCTTGGTTTA
TTTAGCATTAGTTTAAGATGACTAGCTCTTGAGGGAAGATGGATACTGACTAATTTAAAC
ACTGAAAGTGTGGAGACAAACGGCGCACGGAGAGTCACTTCAGTCTTGAACTTTCTAGAT
TTTGTAGCCCGTTGCGAGTGATGGAGGTGATCACCCTGAGCTCCGAGAGTGAGGAAGATG
ATTCTGATGTGGAAATAATCGCTCAGTACAGCAACTTCTTGAGCCAAACCGACCCACTTC
CCCAGCAGGATGGCAAAGTTTGCGCCGACGCCCCGAACGTGAACGCGCTAGTGCAAAACA
TTGACGTCACAGATTCAAAACGGATCCTCGCAGATCTAAAGAGTCCCATCAAGCCTGATT
TTAACGCCAGACCCATAGTAGACCTGTCTGACATCGACGCAGATTTTAAAATACAAAACG
TCTGCGGCTCCACGACTGAACAAGAGAACGTCTTCCAGAGAAACGCTTCAGCAGATCCCC
CCAGGCCAACGCTCCAGAGGAGCAGTGCGGACCCCCAAACACAAATTCATACACTGACTC
ATGAGGAACTCTTCCCATTTGTGACTCTAACACGCCTGCCTTTTATTGAAGGGCAC

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)