Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2131 cluster # 2131       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2131#0 length = 652 sequences # 4  
consensusID : consensus_2131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 652
fasta sequence 
                              [GACCAAAAATTGGGGCCCGGGCCCCCCCCGAGGTTTTTTTTTTTTTTTTTTTTTACAGCGATTTCAATTTTATTAAGACATTCATACAACCTGGGGGAGGAGTAAATCTGGTGG-AAAAAAAAAGAAAACTCAAAGGGGTAAATATCAATAAACTCTGAGGGTAAAACCACATCTTGGCGGAAGTTGGCCGCCCGGCGAGGAATTTGAGAGCCAGTGGGATTTAAAAAAAATATGGTACAATTAAATTAAAAGTCACAAAATATAACAAAAAGCAAGTGAATCTACAAGTTTAACATGACTAGTAAGCAGGCCAACAATACACCGTACATATGTTAGCATAACATAATTTGCAGACTTTATACAGCATTTATACCTTTTAGTCCACAAGTAAGTTACTAAATGGTGGAGGACATCAAACACACACACCTTAATTGAACATGGAAAGAAATACCTGATTAGGACCTTTACATTTACAGACCCCATGTCTTTGTATCTCCGACCAACAGGCTGTCAAGGTTCGAGTCTACGACAGTCCGAGAGGGACCAGCATAGAGCCGCCTCACTTTAATACATACCAAAATTCTGATCCAAGGTTTAGCATTGAGAAGTTTTTTTCCCCCCCTTTGAATAATATAAGCACAATGCAAGTGAA]

[-] EMBL FR0057944            [GACCAAAAATTGGGGCCCGGGCCCCCCCCGAGGTTTTTTTTTTTTTTTTTTTTTACAGCGATTTCAATTTTATTAAGACATTCATACAACCTGGGGGAGGAGTAAATCTGGTGG AAAAAAAAAGAAAACTCAAAGGGGTAAATATCAATAAACTCTGAGGGTAAAACCACATCTTGGCGGAAGTTGGCCGCCCGGCGAGGAATTTGAGAGCCAGTGGGATTTAAAAAAAATATGGTACAATTAAATTAAAAGTCACAAAATATAACAAAAAGCAAGTGAATCTACAAGTTTAACATGACTAGTAAGCAGGCCAACAATAC                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CA329376             [                                                         GCGATTTCAATTTTATTAAGACATTCATACAACCTGGGGGAGGAGTAAATCTGGTGG AAAAAAAAAGAAAACTCAAAGGGGTAAATATCAATAAACTCTGAGGGTAAAACCACATCTTGGCGGAAGTTGGCCGCCCGGCGAGGAATTTGAGAGCCAGTGGGATTTAAAAAAAATATGGTACAATTAAATTAAAAGTCACAAAATATAACAAAAAGCAAGTGAATCTACAAGTTTAACATGACTAGTAAGCAGGCCAACAATACACCGTACATATGTTAGCATAACATAATTTGCAGACTTTATACAGCATTTATACCTTTTAGTCCACAAGTAAGTTACTAAATGGTGGAGGACATCAAACACACACACCTTAATTGAACATGGAAAGAAATACCTGATTAGGACCTTTACATTTACAGACCCCATGTCTTTGTATCTCCGACCAACAGGCTGTCAAGGTTCGAGTCTACGACAGTCCGAGAGGGACCAGCATAGAGCCGCCTCACTTTAATACATACCAAAATTCTGATCCAA                                                             ]
[+] EMBL CA331564             [                                                            ATTTCAATTTTATTAAGACATTCATACAACCTGGGGGAGGAGTAAATCTGGTGGAAAAAAAAAAGAAAACTCAAAGGGGTAAATATCAATAAACTCTGAGGGTAAAACCACATCTTGGCGGAAGTTGGCCGCCCGGCGAGGAATTTGAGAGCCAGTGGGATTTAAAAAAAATATGGTACAATTAAATTAAAAGTCACAAAATATAACAAAAAGCAAGTGAATCTACTAGTTTAACATGACTAGTAAGCAGGCCAACAATACACCGTACATATGTTAGCATAACATAATTTGCAGACTTTATACAGCATTTATACCTTTTAGTCCACAAGTAAGTTACTAAATGGTGGAGGACATCAAACACACACACCTTAATTGAACATGGAAAGAAATACCTGATTAGGACCTTTACATTTACAGACCCCATGTCTTTGTATCTCCGACCAACAGGCTGTCAAGGTTCGAGTCTACGACAGTCCGAGAGGGACCAGCATAGAGCCGCCTCACTTTAATACATACCAAAATTCTGATCCAAGGTTTAGCATTGAGAAGTTTTTTTCCCCCCCTTTGAATAATATAAGCACAATGCAAGTGAA]
[-] EMBL FR0057719            [                                                                                                                                                                                                                                                                   AATATAACAAAAAGCAGGTGAATCTACAAGTTTAACATGACTAGTAAGCAGGCCAACAATACACCGTACATATGTTAGCATAACATAATTTGCAGACTTTATACAGCATTTATACCTTTTAGTCCACAAGTAAGTTACTAAATGGTGGAGGACATCAAACACACACACCTTAATTGAACATGGAAAGAAATACCTGATTAGGACCTTTACATTTACAGACCCCATGTCTTTGTATCTCCGACCAACAGGCTGTCAAGGTTCGAGTCTACGACAGTCCGAGAGGGACCAGCATAGATCCGCCTCACTTTAATACATACCAAAATTCTGATCCAAGGTTTAGCATTGAGAAGTTTTTTTCCCCCCCTTTGA                         ]




>consensus_2131#0
GACCAAAAATTGGGGCCCGGGCCCCCCCCGAGGTTTTTTTTTTTTTTTTTTTTTACAGCG
ATTTCAATTTTATTAAGACATTCATACAACCTGGGGGAGGAGTAAATCTGGTGGAAAAAA
AAAGAAAACTCAAAGGGGTAAATATCAATAAACTCTGAGGGTAAAACCACATCTTGGCGG
AAGTTGGCCGCCCGGCGAGGAATTTGAGAGCCAGTGGGATTTAAAAAAAATATGGTACAA
TTAAATTAAAAGTCACAAAATATAACAAAAAGCAAGTGAATCTACAAGTTTAACATGACT
AGTAAGCAGGCCAACAATACACCGTACATATGTTAGCATAACATAATTTGCAGACTTTAT
ACAGCATTTATACCTTTTAGTCCACAAGTAAGTTACTAAATGGTGGAGGACATCAAACAC
ACACACCTTAATTGAACATGGAAAGAAATACCTGATTAGGACCTTTACATTTACAGACCC
CATGTCTTTGTATCTCCGACCAACAGGCTGTCAAGGTTCGAGTCTACGACAGTCCGAGAG
GGACCAGCATAGAGCCGCCTCACTTTAATACATACCAAAATTCTGATCCAAGGTTTAGCA
TTGAGAAGTTTTTTTCCCCCCCTTTGAATAATATAAGCACAATGCAAGTGAA

clustalw multiple alignements is not computed in this case
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)