These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2631#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 664 fasta sequence [GTTCACTCGGGAAGGATTCAAGAAAGGAAACAAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC-AAATTTCTTCTCTTGAGAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA-GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG--TTAAAAGAATATCTAAAGAA-GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAACCAAACATCAAATGGAGCGATGTTGCAGGTTTAGAAGGAGCCAAGGAGGCCCTGAAAGAAGCAGTCATCCTTCCAATTAAATTCCCCCATCTTTTTACTGGAAAGAGAGCTCCCTGGAGGGGGATCTTGCTTTTTGGACCG] [+] EMBL CA589238 [GTTCACTCGGGAAGGATTCAAGAAAGGAAACAAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC AAATTTCTTCTCTTGAGAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG TTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAA CAAACATCAAATGGAGC ] [+] EMBL BU807419 [ TCGGGAAGGATTCAAGAAAGGATACAAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC AAATTTCTTCTCTTGAAAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG TTAAAAGAATATCTTAAGAA AGAAGAAAAGGGTCCACCTGGTAAGCCTGTCAAAGAGTCTCAATCTGATGATAAAGGGAATGAAAGCGATGGAAGTGATGACCCCGAAAAAAAAAAa ] [+] EMBL BU808265 [ GGAAACAAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC AAATTTCTTCTCTTGAAAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG TTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAACCAAACATCAAATGGAGCGATGTTGCANGTTTAGAAGGAGCCAAGGAGGCCCTGAAAGAAGCAGTCATCCTTCCAATTAAATTCCCCCATCTTTTTACT ] [+] EMBL CA591401 [ ACAAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC AAATTTCTTCTCTTGAGAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG TTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAACCAAACATCAAATGGAGCGATGTTGCAGGTTTAGAAGGAGCCAAGGAGGCCCTGAAAGAAGCAGTCATCCTTCCAATTAAATTCCCCCATCTTTTTACTGGA ] [+] EMBL BU807072 [ ACAAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC AAATTTCTTCTCTTGAGAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGTGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG TTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAACCAAACATCAAATGGAGCGATGTTGCAGGTTTAGAAGGAGCCAAGGAGGCCCTGAAAGAAGCAGTCATCCTTCCAATTAAATTCCCCCATCTTTT ] [+] EMBL FR0058631 [ AAGCTGGGCTAAAACCTCGATTATAGTGTATAATCCTAATTCGATCGTC AAATTGGTTCTCTTGAGAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGNGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCAGGGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAG GTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGGCTCAGTCTGAGGATAAAGGGAATGAAAGCGATGAAGG ] [+] EMBL FR0058771 [ GTGTATAATCCTAATTCGATCGGCGGGGGTTCTTCTCTTGAGAGTTGTTCATCTAGGGCGACGTTACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTAGAATACTTGGACAGGGCAGAGAAC GTAAAAGAATATCTAAAGAAGGAAGGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGACGGTGATGACCCAGAGAAGAAAAAGTTC ] [+] EMBL CA588464 [ CTCTTGAAAGTTGTTCATCTAGGGCTACGATACATTCATTTCGATTATAGGACCAGTGCTTAGTCCGTATGGCTCACACGACTAATTTACAGAAAGCAATCGATCTTGCTAGCAAGGCGGCCCAAGAGGATAAAGCTCAGAACTATGCGGAGGCGCTGAGTCTGTACGAGGCTGCCGTCCAGTACTTCCTCCATGTGGTGAAATATGAGACCCATAGTGACAAAGCCAAAACCAGCATCA GGGGGAAATGTGTTGAATACTTGGACAGGGCAGAGAAG TTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAACCAAACATCAAATGGAGCGATGTTGCAGGTTTAGAAGGAGCCAAGGAGGCCCTGAAAGAAGCAGTCATCCTTCCAATTAAATTCCCCCATCTTTTTACTGGAAAGAGAGTTCCCTGGAGGGGGATCTTGCTTTTTGGACCG] [+] EMBL FR0061153 [ GAATACTTGGACAGGGCAGAGAAGGTGTAAAAGAATATCTAAAGAA GAAAGAAAAGGCTCCACCTGCTAAGCCTGTCAAAGAGTCTCAGTCTGATGATAAAGGGAATGAAAGCGATGAAGGTGATGACCCAGAGAAGAAAAAGTTCCAGAATCAACTCTCAGGTGCCATTGTGATGGAGAAACCAAACATCAAATGGAGCGATGTTGCAGGTTTAGAAGGAGCCAAGGAGGCCCTGAAAGAAGCAGTCATCCTTCCAATTAAATTCCCCCATCTTTTTACTGGAAAGAGAGCTCCCTGGAG ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |