Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2675 cluster # 2675       Sequences # 11       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2675#0 length = 769 sequences # 11  

consensusID : consensus_2675#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 769
fasta sequence
                              [ACAGCCGCCGATGACGCTAGCGA-AAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCGC-TCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCAT----TTCTCCTGGATT---CTCCCTCCACA-TCTTCAGCACT-GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGTATGTTTGGACGATACAACAGTG-AAGTTTGAGATCTGGGACACTGCTGGGCAGGAACGCTACCACAGCTTGGCGCCGATGTACTACAGAGGAGCTCAGGCCGCTATTGTGGTCTACGACATCACCAACACCGATACATTCACACGCGCGAAGAACTGGGTGAAGGAGCTGCAGCGGCAGGCCAGCCCCAACATCGTGATCGCCCTGGCAGGAAACAAAGCGGATCTGGCCAACAAGCGCGCTGTGGACCACCAGGAAGCGCAAGCGTATGCAGACGACAACAGTTTGCTCTTTATGGAAACTTCAGCCAAGACTGCGATGAATGTCAATGAGATCTTCATGGCGATAGCCAAGAAGCTGCCTANNAACGAGCCTCAGGGTGGATCC]

[+] EMBL FR0062345            [ACAGCCGCCGATGACGCTAGCGA AAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCGCGTGCCTCTGTCACCTGCCTAAAGAGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCGT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATAGGAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTCGGTGGAATCGGCAGGGGGAAAGTCCAGTTTGGCGCTGCGCTTTGTCAAAGGCCAGGTCCACGAATACC                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL FR0061949            [  AGCCGCCGATGACGCTAGCGAGAAGAAGAGAAAGTATTCTCCATCTGGGGAGGTCCCCGCGTCCCTCTGTCACCTGCCTAAAGTGAACCACCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCGT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGTCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGTCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGCGCTGTTGGGGGAATCCGCAGGTGGAAAGTCCAGTTTGGGGCTTCGCTTTGTCAAAGGCCAGTTCCCCGAATACCAGGAGAGCACCATGTGg                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA846319             [  cGCTTACGATGACGCTAGCGA AAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCGC TCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCGT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGTATGTTTGGACGATACAACAGTG AAGTTTGAGATCTGGGACACTGCTGGGCAGGAACGCTACCACAGCTTGGCGCCGATGTACTACAGAGGAGCTCAGGCCGCTATTGTGGTCTACGACATCACCAACACCGATACATTCACACGCGCGAAGAACTGGGTGAAGGAGCTGCAGCGGCAGGCCAGCCCCAACATCGTGATCGCCCTGGCAGGAAACAAAGCGGATCTGGCCAACAAGCGCGCTGTGGACCACCAGGAAGCGCAAGCGTATGCAGACGACAACAGTTTGCTCTTTATGGAAACTTCAGCCAAGACTGCGATGAATGTCAATGAGATCTTCATGGCGATAGCCAAGAAGCTGCCTANNAACGAGCCTCAGGGTGGATCC]
[+] EMBL CA590836             [    CCGCCGATGACGCTAGCGA AAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCGC TCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCAT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGTATGTTTGGACGATACAACAGTG AAGTTTGAGATCTGGGACACTGCTGGGCAGGAACGCTACCACAGCTTGGCGCCGATGTACTACAGAGGAGCTCAGGCCGCTATTGTGGTCTACGACATCACCAACACCGATACATTCACACGCGCGAAGAACTGGGTGAAGGAGCTGCAGCGGCAGGCCAGCCCCAACATCGTGATCGCCCTGGCAGGAAACAAAGCGGATCTGGCCAAC                                                                                                                                                         ]
[+] EMBL CA589880             [    CCGCCGATGACGCTAGCGA AAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCGC TCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCAT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGTATGTTTGGACGATACAACAGTG AAGTTTGAGATCTGGGACACTGCTGGGCAGGAACGCTACCACAGCTTGGCGCCGATGTACTACAGAGGAGCTCAGGCCGCTATTGTGGTCTACGACATCACCAACACCGATACATTCACACGCGCGAAGAACTGGGTGAAGGAGCTGCAGCGGCAGGGCAGCCCCAACATCGTGATCGCC                                                                                                                                                                                       ]
[+] EMBL BU808450             [      GCCGATGACGCTAGCGA AAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCGC TCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCATNTTCTNCNNCTGGATTNNNCTCCCTCCACANTCTTCAGCACTGGGGCTATGGCAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL FR0062375            [                                  AGTATTCTCCATCTGGTGAGGTCCCCGC TCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCGT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGGATGTTTGGACGATACAACAGTGAAAGTTTGAGg                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL FR0063224            [                                                GGTGAGGTCCCCGC TCCCTCTGTCACCTGCCTAAAGTGAACCAGGGGACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCGT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGACTATGGCAGTGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGCGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGTATGTATGGACGATACAACAGTG AAGTTTGAGATCTGGCACACTGCTTGGCAGGAACGCTACCACAGCTTGGCGCCGATGTACTACAGAGGAGCTCAGGCCGCTAATTGTGGCTACGACATCACCAAC                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0062334            [                                                                                   AGAGAACCAGCACACCTGAACCTGAGCATCAACCATCCCTCCACTCAGGCCGGAACTGAAACCAGCATTCTCCCAT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGCGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTC                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0061104            [                                                                                   AGGGAACCAGCACACCTGAACCTGAGCATCAACCAGCCCTCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCAT    TTCTCCTGGATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGATGGGGGAATCGGCAGTGGGAAAGTCCAGCTTGGTGCTGCGCTTTGTCAAAGGCCAGCTCCACGAATACCAGGAGAGCACCATTG                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL FR0061702            [                                                                                                                                                     tTTCTCCCAT    TTCTCCTGCATT   CTCCCTCCACA TCTTCAGCACT GGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGTGAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTCCAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGGAGCTGCCTTCCTCACACAGACGGTATGCTTGGACGATACAACAGTG AAGTTTGAGATCTGGGACACTGCTGGGCA GAACGCTACCACAGCTTG                                                                                                                                                                                                                                                                                                                           ]


>consensus_2675#0 ACAGCCGCCGATGACGCTAGCGAAAGAAGAGAAAGTATTCTCCATCTGGTGAGGTCCCCG CTCCCTCTGTCACCTGCCTAAAGTGAACCAGCACACCTGAACCTGAGCATCAACCAGCCC TCCACTCAGGCCGGAACTGAAACCAGTATTCTCCCATTTCTCCTGGATTCTCCCTCCACA TCTTCAGCACTGGGCTATGGCAGGGCGAGGCGGAACGACGCGGACCAATGGCACAGCAGT GAGCAACAAGATCTGCCAGTTTAAGCTGGTGCTGTTGGGGGAATCGGCAGTGGGAAAGTC CAGTTTGGTGCTGCGCTTTGTCAAAGGCCAGTTCCACGAATACCAGGAGAGCACCATTGG AGCTGCCTTCCTCACACAGACGGTATGTTTGGACGATACAACAGTGAAGTTTGAGATCTG GGACACTGCTGGGCAGGAACGCTACCACAGCTTGGCGCCGATGTACTACAGAGGAGCTCA GGCCGCTATTGTGGTCTACGACATCACCAACACCGATACATTCACACGCGCGAAGAACTG GGTGAAGGAGCTGCAGCGGCAGGCCAGCCCCAACATCGTGATCGCCCTGGCAGGAAACAA AGCGGATCTGGCCAACAAGCGCGCTGTGGACCACCAGGAAGCGCAAGCGTATGCAGACGA CAACAGTTTGCTCTTTATGGAAACTTCAGCCAAGACTGCGATGAATGTCAATGAGATCTT CATGGCGATAGCCAAGAAGCTGCCTANNAACGAGCCTCAGGGTGGATCC



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)