These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2683#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 793 fasta sequence [AATCAAGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT--CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA-GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG-AGCCGCCGTCATGGATGCAGCCCTCCTGCTTATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCCGAGCATCTGGCTGCCATAGAGATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAGGAGAGTCAGGCCAAAGAACAGTATGAGCAGATCCTTGCCTTCGTACAGGGCACAGTTGCTGAAGGCGCTCCCATCATTCCCATATCGGCGCAGCTCAAGTACAACATCGAGGTGGTTTGTGAGTACATCGTCAAAAAGATCCCAGTGCCCCTGAGAGACTTTACATCTGAGCCCCGACTCATTGTTATCAGATCTTTT] [+] EMBL BU805298 [AATCAAGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCATGGATGCAGCCCTCCTGCTTATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCCGAGCATCTGGCTGCCATAGAGATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAAGAGAGTCAGGCCAAAGAACAGTATGAGCAG ] [+] EMBL BU807892 [ AGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCAT ] [+] EMBL BU807899 [ ATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGACAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCATGG ] [+] EMBL BU808463 [ TGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCT ] [+] EMBL BU808631 [ GGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTTATTTCCCTAAACAAGACCTCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTATTTTATGTAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTAAACGG AGCCGCCGTCATGGATGCAGC ] [+] EMBL FR0064039 [ GTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGAGGTGACTT CCTTGACACCTCTCTCACCGCAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGNTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGGACCAAGGGCAGCTTCAAACTGGCCAGACACGTGTCTTTTGTTGACTGTCCCGGGCACGACATTTTGATGGCGACCATGTTGAAC ] [+] EMBL FR0063109 [ TTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGAGGGGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGGAAGCCGCCG CATGGATGCA ] [+] EMBL CA846419 [ CTCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACCGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCATGGATGCAGCCCTCCTGCTTATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCTGAGCATCTGGCTGCCATAGAGATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAGGAGAGTCAGGCCAAAGAACAGTATGAGCAGATCCTTGCCTTCGTACAGGGCACAGTTGCTGAAGGCGCTCCCATCATTCCCATATCGGCGCAGCTCAAGTACAACATCGAGGTGGTTTGTGAGTACATCGTCAAAAAGATCCCAGTGCCCCTGAGAGACTTTACATCTGAGCCCCGACTCATTGTTATCAGATCTTTT] [+] EMBL FR0059743 [ TCAACTCTCTGGATGTGACTT CCTTGACACCTCTCTCAGCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGAGACCAAGGGCAGCTTCAAACTGGGCAGACACGGGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACC ] [+] EMBL FR0060055 [ GGATGTGACGTGGCCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGGCGTGTGGCAGCAGCACTC ] [+] EMBL FR0059809 [ GACTT CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGGCAGACACGTGTCTTTTGTTGACTGTCCCGGGCACGACATTTTGATG ] [+] EMBL FR0061600 [ gTT TCTTGACACCTCTTTCACCGCATATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGGCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGACCACACTGTCAGGTTCAAAAATGAGGTTGGGAAGAAACATTACCATTAAGCTAGGATATGCAA ] clustalw multiple alignements is not computed in this case |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |