Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2683 cluster # 2683       Sequences # 12       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2683#0 length = 793 sequences # 12  

consensusID : consensus_2683#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 793
fasta sequence
                              [AATCAAGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT--CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA-GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG-AGCCGCCGTCATGGATGCAGCCCTCCTGCTTATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCCGAGCATCTGGCTGCCATAGAGATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAGGAGAGTCAGGCCAAAGAACAGTATGAGCAGATCCTTGCCTTCGTACAGGGCACAGTTGCTGAAGGCGCTCCCATCATTCCCATATCGGCGCAGCTCAAGTACAACATCGAGGTGGTTTGTGAGTACATCGTCAAAAAGATCCCAGTGCCCCTGAGAGACTTTACATCTGAGCCCCGACTCATTGTTATCAGATCTTTT]

[+] EMBL BU805298             [AATCAAGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCATGGATGCAGCCCTCCTGCTTATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCCGAGCATCTGGCTGCCATAGAGATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAAGAGAGTCAGGCCAAAGAACAGTATGAGCAG                                                                                                                                                                        ]
[+] EMBL BU807892             [     AGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCAT                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BU807899             [       ATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGACAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCATGG                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BU808463             [        TGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BU808631             [         GGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTTATTTCCCTAAACAAGACCTCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTATTTTATGTAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTAAACGG AGCCGCCGTCATGGATGCAGC                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL FR0064039            [                     GTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGAGGTGACTT  CCTTGACACCTCTCTCACCGCAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGNTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGGACCAAGGGCAGCTTCAAACTGGCCAGACACGTGTCTTTTGTTGACTGTCCCGGGCACGACATTTTGATGGCGACCATGTTGAAC                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL FR0063109            [                                   TTGGGCAGCCTCATTTGTCTAAACAAGACCTCAACTCTCTGGAGGGGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGGAAGCCGCCG CATGGATGCA                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA846419             [                                                                CTCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACCGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACCATGTTGAACGG AGCCGCCGTCATGGATGCAGCCCTCCTGCTTATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCTGAGCATCTGGCTGCCATAGAGATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAGGAGAGTCAGGCCAAAGAACAGTATGAGCAGATCCTTGCCTTCGTACAGGGCACAGTTGCTGAAGGCGCTCCCATCATTCCCATATCGGCGCAGCTCAAGTACAACATCGAGGTGGTTTGTGAGTACATCGTCAAAAAGATCCCAGTGCCCCTGAGAGACTTTACATCTGAGCCCCGACTCATTGTTATCAGATCTTTT]
[+] EMBL FR0059743            [                                                                 TCAACTCTCTGGATGTGACTT  CCTTGACACCTCTCTCAGCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGAGACCAAGGGCAGCTTCAAACTGGGCAGACACGGGTCTTTTGTTGACTGTCCCGGTCACGACATTTTGATGGCGACC                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL FR0060055            [                                                                           GGATGTGACGTGGCCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGGCGTGTGGCAGCAGCACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL FR0059809            [                                                                                 GACTT  CCTTGACACCTCTCTCACCGGAGATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGA GCTGGAAAGAAACATTACCATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAGACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCCTGGTACCAAGGGCAGCTTCAAACTGGGCAGACACGTGTCTTTTGTTGACTGTCCCGGGCACGACATTTTGATG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL FR0061600            [                                                                                   gTT  TCTTGACACCTCTTTCACCGCATATCATTAGCAGACAGGCCACCATCAACATTGGCACTATTGGGCATGTGGCCCACGGAAAGTCCACAGTGGTGAAAGCCATTTCTGGTGACCACACTGTCAGGTTCAAAAATGAGGTTGGGAAGAAACATTACCATTAAGCTAGGATATGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]


>consensus_2683#0 AATCAAGATGGCGGGCGACGAGTCTGGTACAACGCTTGGGCAGCCTCATTTGTCTAAACA AGACCTCAACTCTCTGGATGTGACTTCCTTGACACCTCTCTCACCGGAGATCATTAGCAG ACAGGCCACCATCAACATTGGCACTATTGGTCATGTGGCCCACGGAAAGTCCACAGTGGT GAAAGCCATTTCTGGTGTCCACACTGTCAGGTTCAAAAATGAGCTGGAAAGAAACATTAC CATCAAACTAGGATATGCAAATGCTAAGGTATATAAGTTGGACGATCCCAGCTGTCCTAG ACCAGAGTGCTACAGGTCGTGTGGCAGCAGCACTCCTGATGAGTTTCCCTCAGATATCCC TGGTACCAAGGGCAGCTTCAAACTGGTCAGACACGTGTCTTTTGTTGACTGTCCCGGTCA CGACATTTTGATGGCGACCATGTTGAACGGAGCCGCCGTCATGGATGCAGCCCTCCTGCT TATTGCGGGCAACGAACCATGTCCTCAGCCTCAGACATCCGAGCATCTGGCTGCCATAGA GATCATGAAACTGAAGCACATCCTCATCCTGCAGAATAAGATCGACCTTGTGAAGGAGAG TCAGGCCAAAGAACAGTATGAGCAGATCCTTGCCTTCGTACAGGGCACAGTTGCTGAAGG CGCTCCCATCATTCCCATATCGGCGCAGCTCAAGTACAACATCGAGGTGGTTTGTGAGTA CATCGTCAAAAAGATCCCAGTGCCCCTGAGAGACTTTACATCTGAGCCCCGACTCATTGT TATCAGATCTTTT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)