Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Takifugu rubripes
cluster # 2715 cluster # 2715       Sequences # 14       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2715#0 length = 900 sequences # 14  

consensusID : consensus_2715#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 900
fasta sequence
                              [GCACGGGGGGAGATAAAAAATCTGCCAAGAAGAGGCACAGGAGCCGAAACCCGGTCCTGGCCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAACTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAAGGAGACCTCGTCACCAGGAGGGAGAGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCAGAAAGCTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAGTCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCACACAAACTGGTTTTCTAAATGTGTTCTAATAAAGACAGTCTTAGACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGGCCCCCCCCCCCTTTTTTTT]

[+] EMBL CA845381             [GCACGAGGGGAGATAAAAAATCTGCCAAGAAGAGGCACAGGAGCCGAAACCCGGTCCTGGCCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BU806589             [     GAGGGAGATAAAAAATCTGCCAAGAAGAGGCACAGGAGCCGAAACCCGGTCCTGGCCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGTTACTACCCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA333499             [                             AAGAGGCACAGGAGCCGAAACCCGGTCCTGGCCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAACTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAAGGAGACCTCGTCACCAGGAGGGAGAGATCTTTGACACGGAGAAG                                                                                                                                                                                                                                                                                        ]
[+] EMBL FR0055461            [                              AGAGGCACAGGAGCCGAAACCCGGTCCTGGACCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCATGGCCATGTACAAGAGAAAGACCACGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAGCAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGGCCCCTGGCTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA847281             [                                                          GGCCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAACTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAAGGAGACCTCGTCACCAGGAGGGAGAGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCAGAAAGCTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAGTCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCA                                                                                                                                              ]
[+] EMBL CA845745             [                                                          cttCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAACTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAAGGAGACCTCGTCACCAGGAGGGAGAGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCAGAAAGCTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAGTCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCA                                                                                                                                              ]
[+] EMBL FR0058668            [                                                              CGGGGCAGTTGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGAGACAAGAATGGAGGTACTCGTGTTGGCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTTCATCACCCCTGGGACCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0057488            [                                                                GGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGT                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL FR0056381            [                                                                                         GCTATGTATGCCCGCAAGGCCATGTACAAGAGAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGACGCAGCTGTCAAGTGGCCTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CA588827             [                                                                                                                             ACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAACAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGACCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAACTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAAGGAGACCTCGTCACCAGGAGGGAGAGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCA                                                                                                                                                                                                                                                  ]
[+] EMBL CA846428             [                                                                                                                                                                                                                   TGGAGCCTCTCAAGTTCCCAAGATGCGCAAGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATCCGAAGAAGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTATTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTGGTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACCAGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAACTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAATGAGACCTCGCCACCAGGAGGGAGAGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCAGAAAGCTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAAGCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGGTTAC                                                                                                                                                 ]
[+] EMBL CA333422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCAGGAGGGAGAGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCAGAAAGCTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAGTCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCACACAAACTGGTTTTCTAAATGTGTTCTAATAAAGACAGTCTTAGAC                                                                                                ]
[+] EMBL CA330344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GAACAAAGGAAGGAAGACCAGAAAGTTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAGTCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCACACAAACTGGTTTTCTAAATGTGTTCTAATAAAGACAGTCTTAGACCTGAAAAAAA                                                                                      ]
[+] EMBL FR0057751            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ggcaCGAGAAAGTCCCTCAGATGAAGGGCTACCTGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCACACAAACTGGTTTTCTAAATGTGTTCTAATAAAGACAGTCTTAGACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGGCCCCCCCCCCCTTTTTTTT]


>consensus_2715#0 GCACGGGGGGAGATAAAAAATCTGCCAAGAAGAGGCACAGGAGCCGAAACCCGGTCCTGG CCCGGGGCATTGGCCGGTATTCCCGTTCGGCTATGTATGCCCGCAAGGCCATGTACAAGA GAAAGACCAAGACCACTGAGACCAAGGTGGAGAAAAAGATCAAGGAGAAGCCCAGGGCAA CAATTACCAAGACTGTTGGAGGTGACAAGAATGGAGGTACTCGTGTTGTCAAGCTGCGCA AGATGCCCCGCTACTACCCCACAGAGGATGTTCCCCGTAAACTGAGGAGCCATGGGAAGA AGCCCTTCAGCCAGCACAAGAGAAGGCTGCGTTCCTCCATCACCCCTGGGACCGTCCTTA TTTTGCTGACAGGTCGCCACCGTGGAAAGCGTGTGGTGTTCCTGAAGCAGCTGTCAAGTG GTCTCCTGCTTGTCACTGGCCCCCTGGCTTTGAACAGAGTTCCTTTGCGCAGGGCTCACC AGAAGTTTGTCATCGCCACAAACACCAAAGTTGACATTGCTGGTATGAAGATCCCCAAAA CTCTCAATGATGCCTACTTCAAAAAGAAGAAGCTAAGGAGACCTCGTCACCAGGAGGGAG AGATCTTTGACACGGAGAAGGAGAAGTACCAGTTGACGGAACAAAGGAAGGAAGACCAGA AAGCTGTGGATGCTCAGTTGCTGCCACTCATCAAGAAAGTCCCTCAGATGAAGGGCTACC TGCGCTCCACCTTCTGCCTGTCTAATGGGGTTTACCCACACAAACTGGTTTTCTAAATGT GTTCTAATAAAGACAGTCTTAGACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTGGGGGGGGGCCCCCCCCCCCTTTTTTTT



clustalw multiple alignements is not computed in this case


Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)