These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2738#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1365 fasta sequence [GTGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGCTACATCAGTCTAGAGGATCCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACGCTCAGACTAAGTGGCTGCAGTTTATCAGAGACCAGCTGTGATTCTGTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCTGGACCTGAGCACCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTGGACAGCTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTGGGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGATGCAGCTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGCAAGAACCAGCTGAAGGATTCAGGAGTGAAGCAGCTGTCTGATCTCGTAGAGAATCCAGACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAAGAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACACAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAGGAAATAAAAAGAAGCAAAATGACCAAA-AAATCTCCCATGAATACTGTAAATTTAAAGATGTCAAGAATGGAATATCAGCTCAAATGGAATCAAACATAAAGGGAAAAGGCCTCCTTTAAGTTTACTGCAAAAATAAACACAAAATCA] [+] EMBL BU807839 [GTGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGCTACATCAGTCTAGAGGATCCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACGCTCAGCCTAAGTGGCTGCAGTTTATCAGAGACCTGCTGTGATTCTGTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCTGGACCTGAGCTCCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTGATTAACTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGACTGCAGCTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGCTACAAC ] [-] EMBL CA588712 [ tCTCAGACTAAGTGGCTGCAGTTTATCAGAGACCAGCTGTGATTCTATGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCTGGACCTGAGCATCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTAGACTGCTGCAGTTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCACTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTTGGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGAGATGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTAAGAACCAGCTGAAGGATTCAGGAGTGAAGCAGCTGTCTGATCTCGTAGAGAATCCAGACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAAGAATTCAGTGTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGA ] [-] EMBL CA588804 [ ATCCACACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAGAAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCTCCTTGAAGTTAAATTAGTTCCTGGTATCACACAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCAAAATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAGGAAACAAAAAGAAGCAAAATGACCAAATAAATCTCCCATGAATACTGTAAATTTAAAGA ] [-] EMBL CA331089 [ ACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCCTCCATAGATGAAGAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACAAAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTATGAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCAAAGCTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTGATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAG ] [+] EMBL CA330078 [ ACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACACGATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTCTCATCATGCCTTCAGAATCTTTAGGGTTTATTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCATCAGAATGAC GCTATCGGT GGAACCGCAGCTCATTTGACTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAAATGTGGGAAATAGGAAATAAAAAGAAGCAAAATG ] [-] EMBL CA332689 [ AGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAATTAGTTCCTGGTATCACACAATGCATCTCTATAAAGTTCTAAATGGCTCCTCGACCACTCTTATAAGCATGGAAACATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTTCAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAGCTGCAGCCAGCAAAAACCCACCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTAGACTTTAGTCAGTCTGTTCAATGTTATATGATTTATTGCAATCTAATAAAAACTATGAACAAATGTGGGAAATAGGAAATAAAAAGAAGTAAAATGACC AAATCTCCCATGAATACTGTAAATTTAAAGATGTCAAGAATGGAATATCAGCTCAAATGGAATCAAACATAAAGGGAAAAGGCCTCCTTTAAGTTTACTGCAAAAATAAACACAAAATCA] consensusID : consensus_2738#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1357 fasta sequence [CACCATCAAGAATAAAGGGATTATGGAGTCTTTCCTAAAATATTTGAAACCAAACCCTTTTTGCTGGTTTGCTGGGTTGT---AAAATAACGATCCAGTCAAATCTCTTGATGACTTCCTCAGGAGAGAACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGGACTTGTTTGTTCGCTTCCTTCATGGTCTCTCTCTGGAGTCCAATCGGAGGATCTTGGGTGGACTGTTGGATCAGAGGAACAGCCGCTCAGAAACCATCCAGAAGGTCCTCAACAACCTGAAGGAGGTGAACAGTGATGAAATCTCCCCAGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAAGGATCAGTCAGTCCATCAGGAGATCCAAGAGATCCTGAAGTCAGAGAAGAAATCAGAGAGGGGACTGTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGATGAGCTGGACCTGCAGCAGTACAAAACCTCAGAGGAGGGACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAAGAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCTGAGCTTAAGCGAGAACAAAAGCCTGACAGATGCTGCAGTAAAGTTACTGTCTTCTGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGGTTGTCTTGCGGGAGTCTATGGGATCGGAGGTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGAGCTGAGCGGGAACCAGCTGGAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGCTGCAGGTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGAGAGAACCAGCTGAAGGATTCAGAGCTGAAGCTGCTGTCTGATCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGAGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCGTCCATAGATGAAAAAATCAGTTTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAAATAGTTCCTGGTATCATCGGTGTTGTGTGTATATTTAATAACACAATCTCAAGTTGTTTATTTTAAATAAAAGAACACCGTGAGGTCACCTG] [+] EMBL CA589492 [CACCATCAAGAATAAAGGGATTATGGAGTCTTTCCTAAAATATTTGAAACCAAACCCTTTTTCCTGTTTTGCTGGGTTGT ATAATAACGATCCAGTCAAATCTCTTGATGACTTCCTCATGAGAGAACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGGACTTGTTTGTTCGCTTCCTTCATGGTCTCTCTCTGGAGTCCAATCGGAGGATCTTGGGTGGACTGTTGGATCAGAGGAACAGCCGCTCAGAAACCATCCAGAAGGTCCTCAACAACCTGAAGGAGGTGAACAGTGATGAAATCTCCCCAGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAAGGATCAGTCAGTCCATCAGGAGATCCAAGAGTTCCTGAAGTCAGAGAAGAAATCAGAGAGGGAACTGTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGATGAGCTGGACCTGCAGCTGTACAAAACCTCAAAGGAGGGACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGTACT ] [+] EMBL FR0061653 [ CAATAATAAAGGTATTATGGAGTCTTTCTTAAAATATTTGAAACCAAACCCTTTTTGCTGGTTTGCTGTGTTGTTCACAAATAACGATCCAGTCACATCTCTTGATGACTTCCTCAGGAGAGCACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGTACTTGTTTGTTCGCTTCCTTCATGGTCTCTTTCTGGAGTCCAATCAGAGGATCTTGTGTG ] [+] EMBL FR0058664 [ GAAGGATCAGTCAGTCCTTCAGGAGATCCAAGAGATCCTGAAGTCAGAGAAGAAATCAGAGAGGAGACTGTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGATGAGCTGAACCTGCAGCAGTACAACACCTCAGATGAGGGACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAAGAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCTGAGCTTAAGCGAGAACCAAAGCCTGACAGATG ] [+] EMBL CA341060 [ GACGACGTCGCCTGATTCCAGCTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAAGAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCTGAGCTTAAGCAAGAACAAAAGCCTGACAGATGCTGCAGTAAAGTTACTGTCTTCTGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGGTTGTCTTGCTGCAGTTTATCAGATCTTAGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGTGGGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGCGCTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCACTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGAGCTGAAGCTGCTGTCTGATCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGTG ] [-] EMBL CA332190 [ tGTGACTCTCTGGCCTCGGCGGTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGAGCTGAACTCCAACTTTCTAGAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGACTGCAGGTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGACAGAACCACCTGAAGGATTCAGAGCTGAAGCTGCTGTCTGCTCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCATCTGCTGCATCACTCACTGACCACTGGAGAAGAGCATCTGTGGAAACATCTGCCGTCTACTCCGTCCATAGATGAAAAAATCAGTTTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGTCGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTGAAGTTAAAATAGTTCCTGGTATCATCGGTGTTGTGTGTATATTTAATAACACAATCTCAAGTTGTTTATTTTAAATAAAAGAACACCGTGAGGTCACCTG] consensusID : consensus_2738#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 588 fasta sequence [GGAAACCAAAGCCTGACAGATGCCGGGGTAAAGTTACTGTCTTCGGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGGCTGAGGGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGTAGGAACCAGCTGAAGGATCCAGCAGTGAAGCAGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACTCTCAGGTCAGTCAGAGATGATCCAGTGCTTTCCCAGGTGTAACTAGTTAGACAATAACTGTTTCCATGTTTGATCTTTGTTATAAACGTAGTGTTACAGTTCTCAGAAAAAAGACCACACAGGACAGATTTGCAGTAATAAATTGCTTGTGGAAATCTGTCCCATGTGAGGATGGTCATCAATGACTAGAAAGGAAGTATCAGTTGTAGATTTGTCTTGTTTTATTTTAGGCTGGCCACAAAACCGCCCAAACATTCAGACACATCAAAAATGGTTCTTCCTGTCTTTTAAAGATCAGAAGGAAAACTAGAAACCCCAAAAAGAAAGCTGCTGCAG] [-] EMBL CA332318 [GGAAACCAAAGCCTGACAGATCC GGTAAAGTTCCTGTCTTCGGCAATGATGCATCCAACCTGCAGACTGGAGACGCTCAGGTTGTCGCGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGCCCTGAGTCAGACCCAGCTGAAGGATCCAGCAGTGAAGCAGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTAA ] [+] EMBL CA329901 [ TGACAGATGCCGGAGTAAAGTTACTGTCTTCTGCAATGATGCATCCAAACTGCAGACTGGAGACGCTCAGACTGAGTGGCTGCAGTTTATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCTGAGTAGGAACCAGCTGCAGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCAGGATCCTCTCTGTGAGCTGGAGACTCTCAGGTCAGTCAGAGATGATCCAGTGCTTTCCCAGGTGTAACTAGTTAGACAATAACTGTTTCCATGTTTGATCTTTGTTATAAACGTAGTGTTACAGTTCTCAGAAAAAAGACCACACAGGACAGATTTGCAGTAATAAATTGCTTGTGGAAATCTGTCCCATGTGAGGATGGTCATCAATGACTAGAAAGGAAGTATCAGTTGTAGATTTGTCTTGTTTTATTTTAGGCTGGCCACAAAACCGCCCAAACATTCAGACACATCAAAAATGGTTCTTCCTGTCTTTTAAAGATCAGAAGGAAAACTAGAAACCCCAAAAAGAAAGCTGCTGCAG] consensusID : consensus_2738#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence [ATCAGCTGTGGTTCTCTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGACTCTCAGTTTGAGAGGGTGCGGTTTATCAGAGATCAGCTGTGATTCTCTGGCCTCAGCGCTGAAGTCCAACCCCTCCCATCTGAAAGAACTGAACCTGGGTCAGAACCACCTGCAGGATTCAGGAGTTGCAATTTTGTCAGATCTTGTGACAAGCCCAAGCTATAAACTGGAGACTCTGGGGTCTCTGTTTGATCCTGCTTTTTAATCTCTCAAGCTGTGACAGCAGAATGTTGATAGGCGTTAGGATTGGCTCTGAAGAGAGAAGAGACATCCGATTATATCATCTTGTTCTAATTGTTATGACAGTTGTGGTCAATGTAAATTATGTAAATAAATCTGTATTACAGGTCGAAACAATTCTGATTCATCAAACCATCCTTCCATTAAAGTGTTTCTCTTATTCAAACGGTATTCAAATAAACATT] [-] EMBL CA331082 [ATCAGCTGTGGTTCTCTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGAGAACTGGACCTGAGTGAGAACCAGCTGCAGGATTCAGGAGTGAAGCTGCTCTGTTCTGGACTGGAGAGTCCAAACTGTAAACTGGAGACTCTCAGTTTGAGAGGGTGCGGTTTATCAGAGATCAGCTGTGATTCTCTGGCCTCAGCGCTGAAGTCCAACCCCTCCCATCTGAAAGAACTGAACCTGGGTCAGAACCACCTGCAGGATTCAGGAGTTGCAATTTTGTCAGATCTTGTGACAAGCCCAAGCTATAAACTGGAGACTCTGGGGTCTCTGTTTGATCCTGCTTTTTAATCTCTCAAGCTGTGACAGCAGAATGTTGATAGGCGTTAGGATTGGCTCTGAAGAGAGAAGAGACATCCGATTATATCATCTTGTTCTAATTGTTATGACAGTTGTGGTCAATGTAAATTATGTAAATAAATCTGTATTACAGGTCGAAACAATTCTGATTCATCAAACCATCCTTCCATTAAAGTGTTTCTCTTATTCAAACGGTATTCAAATAAACATT] consensusID : consensus_2738#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 429 fasta sequence [CAACCATCTGCTGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCAACTGGAAACTCTGAGATTAAGGAACTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGAGAGAACCAGCTGAAGGATTCAGGAGTGAAGCTGCTGTCTGCTCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACAAAAAAAAGGGAAACGTGGGTTTGTCCCAGGCTTCAGCTTCCTCAAGGCTTAATTCCATTAATAATTCCTAAACTTCCAGGGGTTTTGAGCGCTAGCGGCTGGACGGATGCTTCTATTTTGTCTTGGCTGGAATAAAAGGGCGACTCTTCC] [-] EMBL CA332204 [CAACCATCTGCTGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCACTTTCCAAACTGCCAACTGGAAACTCTGAGATTAAGGAACTGCAGCTTATCAGAGATCAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCTGAGAGAGAACCAGCTGAAGGATTCAGGAGTGAAGCTGCTGTCTGCTCTCGTAGAGAATCCACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACAAAAAAAAGGGAAACGTGGGTTTGTCCCAGGCTTCAGCTTCCTCAAGGCTTAATTCCATTAATAATTCCTAAACTTCCAGGGGTTTTGAGCGCTAGCGGCTGGACGGATGCTTCTATTTTGTCTTGGCTGGAATAAAAGGGCGACTCTTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2738#1 CACCATCAAGAATAAAGGGATTATGGAGTCTTTCCTAAAATATTTGAAACCAAACCCTTT 60 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ------------------------------------------------------------ consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 TTGCTGGTTTGCTGGGTTGTAAAATAACGATCCAGTCAAATCTCTTGATGACTTCCTCAG 120 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ------------------------------------------------------------ consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GAGAGAACTAATGAAATCTCTTGAAAGTGAAAATGGCCACCTGGACTTGTTTGTTCGCTT 180 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ------------------------------------------------------------ consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 CCTTCATGGTCTCTCTCTGGAGTCCAATCGGAGGATCTTGGGTGGACTGTTGGATCAGAG 240 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ------------------------------------------------------------ consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GAACAGCCGCTCAGAAACCATCCAGAAGGTCCTCAACAACCTGAAGGAGGTGAACAGTGA 300 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ------------------------------------------------------------ consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 TGAAATCTCCCCAGACAGAAGCATCAACATCTTCCACTGTCTGATGGAGATGAAGGATCA 360 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ------------------------------------------------------------ consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GTCAGTCCATCAGGAGATCCAAGAGATCCTGAAGTCAGAGAAGAAATCAGAGAGGGGACT 420 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 -----------------------------------------------GTGGCTGCAGTTT 13 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GTCAGAGATCCACTGTTCAGCTCTGGCCTACCTGCTGCAGATGTCAGAGGAGGTTCTGGA 480 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ATCAGAGATCAGCTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAG 73 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 TGAGCTGGACCTG-----CAGCAGTACAAAACCTC----AGAGGAGGGACGACGTCGCCT 531 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 GGTTCTGGACCTGAGCTACATCAGTCTAGAGGATCCAGGAGTGAAGCTGCTCTGTGGTTT 133 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GATTCCAG---CTGTGAGGAACTGCAGGAAGGCCGAACTGTCTGGTAGTTTTCTTTCAAA 588 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 TCTCCAGGATCCTCTCTGTGAGCTGGAGACGCTCAGACTAAGTGGCTGCAGTTTATCAGA 193 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GAGTCATTGGGAAGTTGTGGCCTCAGCAATGACGTCAAACCCTTCTCATCTACGGGAGCT 648 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 GACCAGCTGTGATTCTGTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGGGTTCT 253 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GAGCTTAAGCGAGAACAAAAGCCTGACAGATGCTGCAGTAAAGTTACTGTCTTCTGCAAT 708 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 GGACCTGAGC---ACCAACACGTTGCAGGATTCAGGAGTGAAGCGGCTCTGTTCTGGACT 310 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GATGCATCCAAACTGCAGACTGGAGACGCTCAGGTTGTCTTGCGGGAGTCTATGGGA--- 765 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 GGAGAGTCCAAACTGTAAACTGGAGAGGCTCAGATTGGACAGCTGCAGCTTATCAGAGAT 370 consensus_2738#3 ----------------------------------------------------------AT 2 consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 -------------------TCGGAGGTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGA 806 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 CAGCTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGA 430 consensus_2738#3 CAGCTGTGGTTCTCTGGCCTCAGCTCTGAAGTCCAACCTCTCCCATCTGAGAGAACTGGA 62 consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 GCTGAGCGGGAACCAG---CTGGAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCA 863 consensus_2738#4 ---------CAACCAT---CTGCTGGATCCAGCAGTGAAGCTGCTCTGTGGTTTTCTCCA 48 consensus_2738#0 CCTGAGTGGGAACCAG---CTGCAGGATTCAGGAGTGAAGCTGCTCTGTGGTTTTCTCCA 487 consensus_2738#3 CCTGAGTGAGAACCAG---CTGCAGGATTCAGGAGTGAAGCTGCTCTGTTCTGGACTGGA 119 consensus_2738#2 -------GGAAACCAAAGCCTGACAGATGCCGGGGTAAAGTTACTGTCTTCGGCAATGAT 53 ***** *** *** * * ** *** * ** * * * consensus_2738#1 CTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGCTGCAGGTTATCAGAGATCAG 923 consensus_2738#4 CTTTCCAAACTGCCAACTGGAAACTCTGAGATTAAGGAACTGCAGCTTATCAGAGATCAG 108 consensus_2738#0 CTTTCCAAACTGCCGACTGGAAACTCTGAGATTAAGGGGATGCAGCTTATCAGAGATCAG 547 consensus_2738#3 GAGTCCAAACTGTAAACTGGAGACTCTCAGTTTGAGAGGGTGCGGTTTATCAGAGATCAG 179 consensus_2738#2 GCATCCAAACTGCAGACTGGAGACGCTCAGGCTGAGGGGCTGCAGTTTATCAGAGATCAG 113 ********* ****** ** ** ** * ** *** * ************** consensus_2738#1 CTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCT 983 consensus_2738#4 CTGTGACTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCT 168 consensus_2738#0 CTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTCAGAGAACTGGACCT 607 consensus_2738#3 CTGTGATTCTCTGGCCTCAGCGCTGAAGTCCAACCCCTCCCATCTGAAAGAACTGAACCT 239 consensus_2738#2 CTGTGGCTCTCTGGCCTCGGCGCTGAGGTCCAATCCCTCCCATCTGAGGGTTCTGGACCT 173 ***** *********** ******* ****** *********** * * *** **** consensus_2738#1 GAGAGAGAACCAGCTGAAGGATTCAGAGCTGAAGCTGCTGTCTGATCTCGTAGAGAATCC 1043 consensus_2738#4 GAGAGAGAACCAGCTGAAGGATTCAGGAGTGAAGCTGCTGTCTGCTCTCGTAGAGAATCC 228 consensus_2738#0 GAGCAAGAACCAGCTGAAGGATTCAGGAGTGAAGCAGCTGTCTGATCTCGTAGAGAATCC 667 consensus_2738#3 GGGTCAGAACCACCTGCAGGATTCAGGAGTTGCAATTTTGTCAGATCTTGTGACAAGCCC 299 consensus_2738#2 GAGTAGGAACCAGCTGAAGGATCCAGCAGTGAAGCAGCTCTGTGGTTTTCTCCAGGATCC 233 * * ****** *** ***** *** * * * * * * * ** consensus_2738#1 ACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCAT 1103 consensus_2738#4 ACACTATGGGCTGGAGACATTGAGACAGTAGCTGGTTGAAGCCAGTCAAC---------- 278 consensus_2738#0 AGACTATGGGCTGGAGACATTGAGTCAGTAGCTGGTTGAAGCCAGTCAACTCCCGCTCAT 727 consensus_2738#3 AAGCTATAAACTGGAGACTCTGGGGTCTCTGTTTGATCCTGCTTTTTAATCTC------- 352 consensus_2738#2 TCTCTGTGAGCTGGAGACTCTCAGGTCAGTCAGAGATGAT-CCAGTGCTTTCCCAG--GT 290 ** * ******** * * * * * * consensus_2738#1 CTGCTGCATCACTCACTGACCACTGGAGAAGAGCATCTGTGGAAACATCTGCCGTCTACT 1163 consensus_2738#4 ---------------------AAAAAAAAGGGAAACGTGGGTTTGTCCCAGGCTTCAGCT 317 consensus_2738#0 CTGCTGCATCACTCACTGACCACTGGTGAAGAGCATCTGTGGAAACATCTGCCGTCTACT 787 consensus_2738#3 ----------------TCAAGCTGTGACAGCAGAATGTTGATAGGCGTTAGG-ATTGGCT 395 consensus_2738#2 GTAACTAGTTAGACAATAACTGTTTCCATGTTTGATCTTTGTTATAAACGTAGTGTTACA 350 * * * consensus_2738#1 CCGTCCATAGATGAAAAAATCAGTTTTTAAAAAGCGGTGGTGGACTTTCAGGAGATCAGT 1223 consensus_2738#4 TCCTCAAGGCTTAATTCCATTAATAATTCCTAAACTTCCAGGGGTTTTGAGCG--CTAGC 375 consensus_2738#0 CCCTCCATAGATGAAGAATTCAGTTTTTAAAAAGCGCTGGTGGACTTTCAGGAGATCAGT 847 consensus_2738#3 CTGAAGAGAGAAGAGACATCCGATTAT--ATCATCTTGTTCTAATTGTTATGACAGTTGT 453 consensus_2738#2 GTTCTCAGAAAAAAGACCACACAGGACAGATTTGCAGTAATAAATTGCTTGTGGAAATCT 410 * * * * consensus_2738#1 CGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTG-AAGTTAAAATAGTTCCTGGT-ATCA 1281 consensus_2738#4 GGCTGGACGGATGCTTCTATTTTGTCTTGGCTGG-AA--TAAAAGGGCGACTCTT-CC-- 429 consensus_2738#0 CGATGGTCGACAAAGCAGAAGCAGCTTCGCCTTG-AAGTTAAATTAGTTCCTGGT-ATCA 905 consensus_2738#3 GGTCAATGTAAATTATGTAAATAAATCTGTATTACAGGTCGAAACAATTCTGATTCATCA 513 consensus_2738#2 GTCCCATGTGAGGATGGTCATCAA---TGACTAGAAAG--GAAGTATCAGTTGTAGATTT 465 * * * ** consensus_2738#1 TCGGTGTTGTGTGTATATTTAATAACACAATCTCAAGTTGTTTATTTTAAATAAAAGAAC 1341 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 CACAATGCATCTTTATAAAGTTCTAAATGGCTCCTCGGCCACTCTTAGAAGCATGGAAAC 965 consensus_2738#3 AACCATCCTTCCATTAAAGTGTTTCTCTTATTCAAACGGTATTCAAATAAACATT----- 568 consensus_2738#2 GTCTTGTTTTATTTTAGGCTGGCCACAAAACCGCCCAAACATTCAGACACATCAAAAATG 525 consensus_2738#1 ACCGTGA-GGTCACCTG------------------------------------------- 1357 consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ATTCTCTTAATTGTCTCTTCAAATGTCTGTATTATACGTTACTATTTTACATCATGCCTT 1025 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 GTTCTTCCTGTCTTTTAAAGATCAGAAGGAAAACTAGAAACCCCAAAAAGAAAGCTGCTG 585 consensus_2738#1 ------------------------------------------------------------ consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 CAGAATCTTTAGGGTTTAGTATTTACTGTCTCTGTGACATGGAGCATTGGAATATTTCAG 1085 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 CAG--------------------------------------------------------- 588 consensus_2738#1 ------------------------------------------------------------ consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 CTGCAGCCAGCAAAAACCCATCAGAATGACGGCTATCGGTGGGAACCACAGGTCATTTGA 1145 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 ------------------------------------------------------------ consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 CTTTAGTCAGTCTGTTCAATGTTATAGGATTTATTGCAATCTAATAAAAACTATGAATAA 1205 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 ------------------------------------------------------------ consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 ATGTGGGAAATAGGAAATAAAAAGAAGCAAAATGACCAAAAAATCTCCCATGAATACTGT 1265 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 ------------------------------------------------------------ consensus_2738#4 ------------------------------------------------------------ consensus_2738#0 AAATTTAAAGATGTCAAGAATGGAATATCAGCTCAAATGGAATCAAACATAAAGGGAAAA 1325 consensus_2738#3 ------------------------------------------------------------ consensus_2738#2 ------------------------------------------------------------ consensus_2738#1 ---------------------------------------- consensus_2738#4 ---------------------------------------- consensus_2738#0 GGCCTCCTTTAAGTTTACTGCAAAAATAAACACAAAATCA 1365 consensus_2738#3 ---------------------------------------- consensus_2738#2 ---------------------------------------- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |