These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1253 fasta sequence [GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAATATCAAGAACTGAGAATACAAACCAGCTAAAGACAATGATCAACAGTCCCACTTCAGGGCATT-TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC---CTATTTTTGGGCTGAGCGGCAGTGAAGGC-TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGGTCATTGATTGTATCTGTCATCACCCTCTCTG-GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAAAGT-GCCGGCCTCCTTCTTGACATCATGCTGCTTTAGCCA] [+] EMBL CA332173 [GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAATATCAAGAACTGAGAATACAAACCAGCTAAAGACAATGATCAACAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATTCTTACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGCTTTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAGTGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAG ] [-] EMBL CA330250 [ TAAAGACAATGATCAACAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAG ] [+] EMBL CA332529 [ CAACAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGGGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTT ] [+] EMBL CA332174 [ ACCGCCCCACTTCATGTTTTTCCCTTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGGGGGGCCGTTTGATCAATGCACATCAAAATCTAACCTTCTATTTTTGGGCTGAGCGGCAGGGAAGGC TTTTTTTATCCAATTAATAGAAGCAACAGGGGGGTGCAGTAAATAAAATGGACTTTAGTGAAGATAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGCCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGCCACTTTCAT ] [+] EMBL CA331812 [ CAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGT ] [+] EMBL CA332658 [ CAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTTCTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGATAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGTCACTTTCATTTTTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATG ] [+] EMBL CA332452 [ CAGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTT ] [+] EMBL CA332293 [ AGTCCCACTTCAGGGCATT TATTCCCGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACTGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCAC ] [+] EMBL CA332509 [ AGTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGT ] [+] EMBL CA332064 [ GTCCCACTTCAGGGCATT TATTCCCGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGA ] [+] EMBL CA332334 [ GTCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGG ] [+] EMBL CA332525 [ tttttTCCCACTTCAGGGTTTT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGGGGGGGGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGATAATTTACAGGGGGGGGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCT ] [+] EMBL CA332481 [ TCCCACTTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGTCACTTTCATTTTTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGNCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGT ] [+] EMBL CA332634 [ TTCAGGGCATT TATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTT ] [+] EMBL CA588850 [ ATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAAC CTATTTTTGGGCTGAGCGGCAGTGAAGGC TTTTTTTATCCAAACTAGAGAAGCAACAGTGGTGTGCAGTAAATAAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCACCGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATGCGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGCCAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATTGTCACTTTCATTTTTTTGGTTTCCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGTGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGT ] [+] EMBL CA331214 [ CCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGATCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCAATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGTTCATTGATTGTATCTGTCATCACCCTCTCTG GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAAAGT GCCGCCCTCCTTCTTGACATCATGCTGCTT ] [+] EMBL CA331344 [ TCATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTT CACAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCCCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGGTCATTGATTGGATCTGTCATCACCCTCTCTG GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAAAATGGCCGGCCTCCTTCTTGACATCATGCTGCTTTAGCCA] [+] EMBL CA329561 [ ATGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGAATGGGGTCGGTGATTGTATCTGTCATCACCCTCTCTGAAAGCCTCGGGGATGTCCTCTCCAAA ] [+] EMBL CA332061 [ gGATGTTTATTACTTGTTCAGCCAACATAAACAGATCCAGCAGGTGAATTGTGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGCCTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAAATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGGGTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAGGCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTAGTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCAGATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTCAGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAACCTGCAGAGCAGTATGGGTTCATTGATTGTATCTGTCATCACCCTCTCTG GAGCCTCCGGGATGTCCTCTCCAAACTCATAGAA ] consensusID : consensus_2792#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 389 fasta sequence [TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAAACAAAAATACATTTCTACATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTTTATCCATATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGAACACCATCTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAGGCGGCGTTGCTTTCTGTTGTGTTTTAATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATTAATATGGGAACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTTACCAATCTGTTTTATTTATCTAATTCCAGTGTTTGAAT] [+] EMBL CA332176 [TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAAACAAAAATACATTTCTACATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTTTATCCATATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGAACACCATCTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAGGCGGCGTTGCTTTCTGTTGTGTTTTAATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATTAATATGGGAACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTTACCAATCTGTTTTATTTATCTAATTCCAGTGTTTGAAT] consensusID : consensus_2792#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 245 fasta sequence [ACCAAAACTTGGGTCCCGGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCAACAGTCCCACTTCAGGGCATTTATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTATTTTTGG] [-] EMBL FR0057032 [ACCAAAACTTGGGTCCCGGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCAACAGTCCCACTTCAGGGCATTTATTCAGGGTAGAAGCAGGAAGACAGTCAAATATTTGGACATGAGTGGCAGCGCAGAGTATAGTGATCCCAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTGAGATTGTGTGGTGCCGTTTGATCAATGCACATCAAAATCTAACCTATTTTTGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2792#0 GGACCAATCTGTTTTATTTATCCAATTCCAGTGTTTGAATTTAATAATTACACTGGTTAA 60 consensus_2792#2 -------------------------------------------ACCAAAACTTGGGTCCC 17 consensus_2792#1 -----TTATGGGTTTATTTGCTTTATGTACAACATAAATCACGATAA--ACAAAAATACA 53 * * ** * consensus_2792#0 TATCAAGAACTGAGAATACAAACCAG-CTAAAGACAATGATCAACAGTCCCACTTCAGGG 119 consensus_2792#2 GGGCCCCCCCCGAGAGTTTATCCTTCTCCCATCTTTTTTTTCAACAGTCCCACTTCAGGG 77 consensus_2792#1 TTTCTACATTAAAAGAATGCTAGAACTATCATCTTTTAAATTGAAAACTGTATTTTTGTT 113 * * * * * * * ** * consensus_2792#0 CATTTATTCAGGGTAG--AAGCAGGAAGACAGTCA--AATATTTGGACATGAGTGGCAGC 175 consensus_2792#2 CATTTATTCAGGGTAG--AAGCAGGAAGACAGTCA--AATATTTGGACATGAGTGGCAGC 133 consensus_2792#1 TATCCATATGTATTATTCATTCCATAAAGTGGCCCCTGTCATATGGCACCATCTGGTTGA 173 ** ** ** * * ** * * ** *** *** * consensus_2792#0 GCAGAGTATAGTGATCC-CAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTG 234 consensus_2792#2 GCAGAGTATAGTGATCC-CAAAGATTCAAGAATTTTAAACATTAAAGCACATACAGACTG 192 consensus_2792#1 ACACCATCTGGTGGTCAGCAGAGGAACTGCAATCCCTCAGAG-GCGGCGT-TGCTTTCTG 231 ** * * *** ** ** ** * *** * * ** * * *** consensus_2792#0 AGATTGTGTGGTGCCGTTTGATCAA--TGCACATCAAAATCTAACCTATTTTTGGGCTGA 292 consensus_2792#2 AGATTGTGTGGTGCCGTTTGATCAA--TGCACATCAAAATCTAACCTATTTTTGG----- 245 consensus_2792#1 TTGTGTTTTAATCAAACTTAGTCTACCTGCAGGTCAGATTACATCATACATTTAAATATT 291 * * * * ** ** * **** *** * * * * ** *** consensus_2792#0 GCGGCAGTGAAGGCTTTTTTTATCCAAACTAG--AGAAGCAACAGTGGTGTGCAGTAAAT 350 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 AATATGGGAACCAATACTCCTAAGAAATAAAAGCAGAAACATCTAAAGAGTGTGTATGTT 351 consensus_2792#0 AAAATGGACTTTAGTGAAGGTAATGATAAGGTTTGTAAATCATCTCTTCCTCCCTGTCAC 410 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ACCAATCTGTTTTATTTATCTAATTCCAGTGTTTGAAT---------------------- 389 consensus_2792#0 CGTTAATCTACACAAGAATTATCAAGGCATAATTTCAGTCAAATCATGGAGGACAAGATG 470 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 CGCTAAGATTCTGCACGTCATTAAGCAAAGGAGCATGAGCATTCCTCTACCGACCTCAGC 530 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 CAACAGAACCTTTCTGCTCTGGACTCGTTGACCACATAGTCACTTTCATTTCTTTGGTTT 590 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 CCCTGGGAGATTCAGAGACACCCGGTCATCATGATGTTTATTACTTGTTCAGCCAACATA 650 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 AACAGATCCAGCAGGTGAATTGCGAGATGAAGACATGCACCTTCATTAGGCTCCCAACGC 710 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 CTCAGACAGAAAACAGCTAAAGAGACTAGATTTCAATCGGAATTTAAAGATTTTAGTCAA 770 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 ATTTCACAGCGACAGAACAGGGGAGTGTGCTCAAGGTCGGCAGCGTTGGATGAAGCGTGG 830 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 GTACAGGCACACGTCTCGTATGTGATGTCTGTTCAGCAGCCAGGTGAGGAAACGCTCCAG 890 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 GCCCAGACCATAACCTCCGTGAGGGCATGTGCCATACTTCCTCTGGTCGGTGTACCAGTA 950 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 GTAGGGCGTGGGGTCGATTCCCTCCCTCTTGTATCCCTCCAGCAGCTCCTCGGAGTCCCA 1010 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 GATACGCATGGATCCTCCAACGATCTCTCCAACATTTGGCATCAGCACGTCGACCGATTC 1070 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 AGTGAGGCGCTTGTCCTCGCTGCAGCGCTGCATGTAGAAGGACTTGATCTCAGCAGGGAA 1130 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 CCTGCAGAGCAGTATGGGGTCATTGATTGTATCTGTCATCACCCTCTCTGGAGCCTCCGG 1190 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 GATGTCCTCTCCAAACTCATAGAAAGTGCCGGCCTCCTTCTTGACATCATGCTGCTTTAG 1250 consensus_2792#2 ------------------------------------------------------------ consensus_2792#1 ------------------------------------------------------------ consensus_2792#0 CCA 1253 consensus_2792#2 --- consensus_2792#1 --- |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |