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Takifugu rubripes
cluster # 2806 cluster # 2806       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2806#0 length = 689 sequences # 20  
consensus_2806#1 length = 383 sequences # 1  
consensus_2806#2 length = 140 sequences # 1  

consensusID : consensus_2806#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 689
fasta sequence
                              [GCTGAAAGCTTCTCGAAAGAACTGCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC-CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC-GGGGACGGCACC-ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA-TAT-GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG-TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGATGATTGGCATCAAGAAGGTCCAGGGAGGAGGTCTCGAGGATTCCCAGTTGGTGACCGGCGTTGCCTTCAAGAAAACCTTC]

[+] EMBL CA590439             [GCTGAAAGCTTCTCGAAAGAACTGCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCANTAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTGTTTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGC                                                                                                                                                                 ]
[+] EMBL BU806780             [        CTTCTCGAAAGAACTGCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGATG                                                                              ]
[+] EMBL BU807810             [                     CTGCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TATNGTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGATGATTGGCATCAAGAAGGTCCAGGGAGGAGGTCTCG                                            ]
[+] EMBL CA333287             [                       GCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCCAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGATGATTGGCATCAAGAAGGTCCAGGGAGGAGGT                                                ]
[+] EMBL CA590179             [                        CGAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCGACCTCGCTGTCAACAAGATCAAGGAAATCTCCGTTTCTGTGAACAAGGACGATAAGCAAGACCAGAAG                                                                                                                                                                                                             ]
[+] EMBL CA590315             [                         GAAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAAAAG                                                                              ]
[+] EMBL BU805771             [                          AAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGC                                                                                                                                                                                                         ]
[+] EMBL CA591275             [                          AAGATGATGCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGTACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACGAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGATGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGATGATTGGCATCAAGAATGGCCAGAGACGAGGTCTCGAGGATTCCCACTTGGTG                           ]
[+] EMBL CA332855             [                                  GCCCACACCGGTTATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGTCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAAGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCC                                                                                                                                                         ]
[+] EMBL CA846186             [                                        cCCTTTAATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGTACCTCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGACGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGAGGGTCTCCACCCTCATTTTATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTCCTTTTCCAAGATGGGTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGATGATTGGCATCAAGAAGGTCCAGGGAGGAGGTCTCGAGGATTCCCAGTTGGTGACCGGCGTTGCCTTCAAGAAAACCTTC]
[+] EMBL FR0063663            [                                               ATCGTGCTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACAGGGGGGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAACCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGGC GAGGACGGGACC ACCTTCCGCACCCTTC                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BU804523             [                                                     CTGAAGGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGTTCATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT ATGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAG                                                                                                                                                                                                ]
[+] EMBL CA329935             [                                                          GGAGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCANTAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACCTCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGCAGAGGCAGCTG TTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTCAGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGTCCTTGAAGAT                                                                               ]
[+] EMBL FR0061918            [                                                           GAGGGGACAGACTCATCCCAGGGCATCCCTCAGGTGATCAGTAACATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGATCATCCTGCAGCCAAGACCCTGGGGGACATTGCACGCTCCCAGGATGCTGAGGGC GGGGACGGAACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGGCA TAT GTGGTGGAGGGGCTTCACCCTCAGACCATTATGAGAGCTT                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0060321            [                                                                        CTTCCCAGGGCATCCCTCAGCTCATCAGGGACATCAATGCCTGC CAGGTGACTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGACGGACAAATTGCTAGCGGATGGCAGAGGTAAGGCCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGCGGACATTGCACGCTCCCAGGATGCTGAGGTC GTTGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCT TAT GTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTT                                                                                                                                                                                                                                                                                               ]
[+] EMBL FR0060584            [                                                                                GGCATCCCTCAGCTCATCAGTAACATCAATGCCTGC GAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGNTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGGCTGGGGACGGCACC ACCTCCGTCACCCTCCTGGTCGCCGAGGTCCTGAAGCAGCTGAAGCCA TAT GTGGAGGGGGGTCTCCAC                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL FR0061250            [                                                                                      tCTCAGCTCATCAGTAACATCAATGCCTGC GAGGGGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGGGGTTCATCCTGCAGCCAAGACCCTGGGGGACATTGCACGCTCCCAGGAGGCTGAGGAC GGGGACGGCACC ACCTTCGTCACCCTTGTGGCGCGCGAGTTCCTGAAGCAGCTGAAGGCA TAT GGGGAGGA                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL FR0060545            [                                                                                              CATCAGTAACATCAATGCCTGCGGAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGGGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACCAACCTCCGTCACCCTCCTGGCCGGCGAGGTCCTGAAGCAGCTGAAGTCA TAT GGGGg                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL FR0062066            [                                                                                              CATGAGGGGCGTCAATGCCTGC GAGGNGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGCGGATGGCAGAGGAAAGGGCACCATCTCCAATGAGGGAGCCACTATACTGAAACTGCTGGATGTGGGTCATCCTGCAGCCAAGACCCTGGGGGACATTGCACGCTCGCAGGATGCTGAGGTC GGGGACGGCACC ACCTGCGGCACCCTTTT                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL FR0060226            [                                                                                                        ATCAATGCCTGC CAGGTGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTC GGGGACGGCACC ACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCA TAT GTGGAGGGAGGGCTCCACCCTCAGACCATCATCAGAGCCTT                                                                                                                                                                                                                                                                                               ]


>consensus_2806#0 GCTGAAAGCTTCTCGAAAGAACTGCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGG AGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGCCAGG TGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGG ATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATG TGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTCG GGGACGGCACCACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCAT ATGTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACC TCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGC AGAGGCAGCTGTTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTC AGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGT CCTTGAAGATGATTGGCATCAAGAAGGTCCAGGGAGGAGGTCTCGAGGATTCCCAGTTGG TGACCGGCGTTGCCTTCAAGAAAACCTTC



consensusID : consensus_2806#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 383
fasta sequence
                              [GCTGAAGGAGGGGACAGACTCATCCCATTTTTCCCTCAGCTGATCAGTAACATCGGGGCCTGCCAGGAGATTGCTGAGGCTGCCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGCGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGTTGAGCGGTCTTTTAATGCCAGTTAAAGTTTCACGAAGGGTTTGCAGGGTTTGATTATCTTTAATTTGATGCTCTCCTCAGGTCGGGGACGTCACCACCTCCGTCACCCTCCTGGCCGGCGAGGTCCTGAAGCAGCTTGA]

[+] EMBL FR0058283            [GCTGAAGGAGGGGACAGACTCATCCCATTTTTCCCTCAGCTGATCAGTAACATCGGGGCCTGCCAGGAGATTGCTGAGGCTGCCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGCGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGTTGAGCGGTCTTTTAATGCCAGTTAAAGTTTCACGAAGGGTTTGCAGGGTTTGATTATCTTTAATTTGATGCTCTCCTCAGGTCGGGGACGTCACCACCTCCGTCACCCTCCTGGCCGGCGAGGTCCTGAAGCAGCTTGA]


>consensus_2806#1 GCTGAAGGAGGGGACAGACTCATCCCATTTTTCCCTCAGCTGATCAGTAACATCGGGGCC TGCCAGGAGATTGCTGAGGCTGCCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTG CTAGCGGATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTG CTGGATGTGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCT GAGTTGAGCGGTCTTTTAATGCCAGTTAAAGTTTCACGAAGGGTTTGCAGGGTTTGATTA TCTTTAATTTGATGCTCTCCTCAGGTCGGGGACGTCACCACCTCCGTCACCCTCCTGGCC GGCGAGGTCCTGAAGCAGCTTGA



consensusID : consensus_2806#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 140
fasta sequence
                              [ATGAATGCCTGCCAAGAGACAGCTGAGGCTCGCAGAACCACCCTCGGACCTAGGGGGATGTACAAATTGCTAGTGGATGACACAGGAAAGGCCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGAAAGTGGT]

[+] EMBL FR0060104            [ATGAATGCCTGCCAAGAGACAGCTGAGGCTCGCAGAACCACCCTCGGACCTAGGGGGATGTACAAATTGCTAGTGGATGACACAGGAAAGGCCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGAAAGTGGT]


>consensus_2806#2 ATGAATGCCTGCCAAGAGACAGCTGAGGCTCGCAGAACCACCCTCGGACCTAGGGGGATG TACAAATTGCTAGTGGATGACACAGGAAAGGCCACCATCTCCAATGATGGAGCCACTATA CTGAAACTGCTGAAAGTGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2806#0      GCTGAAAGCTTCTCGAAAGAACTGCGAAGATGATGCCCACACCGGTTATCGTGCTGAAGG 60
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      ----------------------------------------------------GCTGAAGG 8
                                                                                  

consensus_2806#0      AGGGGACAGACTCATCCCAGGGCATCCCTCAGCTCATCAGTAACATCAATGCCTGCCAGG 120
consensus_2806#2      --------------------------------------------ATGAATGCCTGCCAAG 16
consensus_2806#1      AGGGGACAGACTCATCCCATTTT-TCCCTCAGCTGATCAGTAACATCGGGGCCTGCCAGG 67
                                                                  **    ******** *

consensus_2806#0      TGATTGCTGAGGCTGTCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGTGG 180
consensus_2806#2      AGACAGCTGAGGCTCGCAGAACCACCCTCGGACCTAGGGGGATGTACAAATTGCTAGTGG 76
consensus_2806#1      AGATTGCTGAGGCTGCCAGAACCACCCTCGGACCTAGGGGGATGGACAAATTGCTAGCGG 127
                       **  *********  **************************** ************ **

consensus_2806#0      ATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATG 240
consensus_2806#2      ATGACACAGGAAAGGCCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGAAAG 136
consensus_2806#1      ATGGCAGAGGTAAGGGCACCATCTCCAATGATGGAGCCACTATACTGAAACTGCTGGATG 187
                      *** ** *** **** **************************************** * *

consensus_2806#0      TGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGGTCG 300
consensus_2806#2      TGGT-------------------------------------------------------- 140
consensus_2806#1      TGGTTCATCCTGCAGCCAAGACCCTGGTGGACATTGCACGCTCCCAGGATGCTGAGTTGA 247
                      ****                                                        

consensus_2806#0      GGGACGGCACCACCTCCGTCACCCTCCTGGCCGCCGAGTTCCTGAAGCAGCTGAAGTCAT 360
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      GCGGTCTTTTAATGCCAGTTAAAGTTT----CACGAAGGGTTTGCAGGGTTTGAT----T 299
                                                                                  

consensus_2806#0      ATGTGGAGGAGGGTCTCCACCCTCAGACCATCATCAGAGCTTTCCGTACCGCCACCAACC 420
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      ATCTTTAATTTGATGCTC-TCCTCAGG------TCGGGGACGTCACCACCTCCGTCACCC 352
                                                                                  

consensus_2806#0      TCGCTGTCAACAAGATCAAGGAGATCTCCGTTTCTGTGAAGAAGGACGATAAGCAAGAGC 480
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      TCCTGGCCGGCGAGGTCCTGAAGCAGCTTGA----------------------------- 383
                                                                                  

consensus_2806#0      AGAGGCAGCTGTTGGAGAAGTGTGCTGCCACAGCCATGAACTCCAAGCTAATTGCCGGTC 540
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      ------------------------------------------------------------
                                                                                  

consensus_2806#0      AGAAGGACTTCTTTTCCAAGATGGTTGTGGATGCTGTGATGTCTCTGGACGAACTGATGT 600
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      ------------------------------------------------------------
                                                                                  

consensus_2806#0      CCTTGAAGATGATTGGCATCAAGAAGGTCCAGGGAGGAGGTCTCGAGGATTCCCAGTTGG 660
consensus_2806#2      ------------------------------------------------------------
consensus_2806#1      ------------------------------------------------------------
                                                                                  

consensus_2806#0      TGACCGGCGTTGCCTTCAAGAAAACCTTC 689
consensus_2806#2      -----------------------------
consensus_2806#1      -----------------------------
                                                   




Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)