These datas are free for academic use only, please contact me for any other use. Takifugu rubripes see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2847#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 948 fasta sequence [CGAATTCGGCACCAGGACACCACGAGAATGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG-AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT-GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC-TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCAA] [+] EMBL CA330958 [CGAATTCGGCACCAGGACACCATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCGAGGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGGTGGNACAACCCCTACGNCATGGANGNCATGCTGCGAGAACACGACGTGCGTGTGTTTGAGGCCACCGAGCAGCTCATGAAAACTGGACCCATCATCTGGCATCCCGACTACCACTACCACACTCTGCACCATGGAATCCTGCTGATAAAGCTTCTCCACCCACTGCAGGTGACAGAGCCCGCGGCACCCATCTCTCTGCCCACACGGTGGTCCCTACCGGGGCATGCCCTGCTCTGCGTCTGCCTGCCG CACACCCCCACCACTGGCCACGCCCTCATGCCCACACCTC TGCCGCGC ] [+] EMBL FR0057834 [ ACGAGCAAGCTGGCTCTGCCGCTGATGGTTGGAGATGCTGCGGCAGTTCCACGTGTAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGGATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTACTGGCGACGCCATCATGCCCAAACGTC TGCAGTGC ] [+] EMBL CA333647 [ TGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGGCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTG ] [+] EMBL CA330081 [ TGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCC ] [+] EMBL CA330177 [ CTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCC ] [+] EMBL CA330884 [ TCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGAAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGA ] [+] EMBL CA333562 [ TCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTG ] [+] EMBL CA333672 [ TCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTG ] [+] EMBL CA330106 [ GCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGC ] [+] EMBL CA330054 [ GCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGATTTCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAAGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGA ] [+] EMBL FR0057862 [ CAGATGGTTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGGGACGCCATCATGCCCA ] [+] EMBL CA330988 [ TTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTCCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTG ] [+] EMBL FR0057908 [ TTGGAGCTGCTGCGGCAGTTCCACGTG AAGATGGCGGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTCTTGCAGTGCTTGGACGTNCC GCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCC GCATGATC ] [+] EMBL CA330955 [ TACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGT ] [+] EMBL CA330894 [ TCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGT GTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCT ] [+] EMBL FR0057867 [ CAGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCGCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGTAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGTATTGACTACGTCCTACAGACCTACTCCGAAGGAAATCACCCAGTCTTCC ] [+] EMBL CA333545 [ AGTGGCGACGCCATCATGCCCAACCGTC TGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGTGAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGAGGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAAGGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGA ] [-] EMBL CA588749 [ GGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTT ] [+] EMBL CA333666 [ ATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAAGTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCAA] [+] EMBL CA330075 [ AGACGTCCTACAGACCTACTCCTAAAGAAATCACCCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCACCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCA ] [+] EMBL CA330077 [ ATTTTGCCGTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCA ] consensusID : consensus_2847#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 571 fasta sequence [CTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGNGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACA-CCGCCAGTAGTGGCGACGTCAACACTGACTGACCTGCGCTACCACGCTACCATGAAAACGGACCCTGTAAAGAATGTGGCCGCCTCTCTTGCAGCCATCATGCCCAACCGTCTGCAGTGCTTGGACGTCCCGGCAGTGAGTAAC] [+] EMBL CA333554 [CTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACA CCGCCAGTAGTGGCGACGTCAACACTGACTGACCTGCGCTACCACGCTACCATGAAAACGGACCCTGTAAAGAATGTGGCCGCCTCTCTTGCAGCCATCATGCCCAACCGTCTGCAGTGCTTGGACGTCCCGGCAGTGAGTAAC] [+] EMBL FR0057940 [ TGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGNGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCCGCCAGTAGTGG ] [+] EMBL FR0057945 [ GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGGNGGCATGCCCTGCTCTGTGTCTGGGCTGGGTAACA CCGCCAGTAGTGGCG ] [+] EMBL FR0057947 [ GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAGCTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGTCCCTACGG ] consensusID : consensus_2847#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 409 fasta sequence [GCACGAGATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGGATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGGCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGGAGGTCATGAAAACTGACACCATCATCTGGCATCCCGAGTGAGCAGAAATATTCCAATTCCTGTGTTTGCATTATTTTACAAATAACAGATTTATTGACTCGGTAGTGCAAAAGTAGCGAATGTGTGATTAAAAGCTTTTACTG] [+] EMBL CA330918 [GCACGAGATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCTAGATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGGCATGCAGGTCATGCTGGGAGAACACCACGTGCGTGTGTTTGAGGGCACCCAGGACGTCATGAAA ] [+] EMBL CA330055 [ GAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCTGCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCTCGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAACAAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATGCTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACCATCATCTGGCATCCCGAGTGAGCAGAAATATTCCAATTCCTGTGTTTGCATTATTTTACAAATAACAGATTTATTGACTCGGTAGTGCAAAAGTAGCGAATGTGTGATTAAAAGCTTTTACTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2847#0 CGAATTCGGCACCAGGACACCACGAGAATGCTGGCTCTGCTGCTGATGGTTGGAGCTGCT 60 consensus_2847#1 ------------------------------------CTGCTGCTGATGGTTGGAGCTGCT 24 consensus_2847#2 --------------GCACGAGATGAGACTGCTGGCTCTGCTGCTGATGGTTGGAGCTGCT 46 ************************ consensus_2847#0 GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCT 120 consensus_2847#1 GCGGCAGTTCCACGTGAAGATGGCAGAATCATTGGCGGACAGGAGTGCGAGCCTCACTCT 84 consensus_2847#2 GCGGCAGTTCCACGTGAAGATGGCAGGATCATTGGCGGACAGGAGTGCGAGCCTCACTCT 106 ************************** ********************************* consensus_2847#0 CGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAAC 180 consensus_2847#1 CGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAAC 144 consensus_2847#2 CGGCCATACATGGCTTCCCTCAACTATGGCTACCACTTCTGTGGGGGGGTGCTCATCAAC 166 ************************************************************ consensus_2847#0 AAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATG 240 consensus_2847#1 AAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGCCATGCAGGTCATG 204 consensus_2847#2 AAACAGTGGGTGCTGTCTGTAGCTCACTGTTGGTACAACCCCTACGGCATGCAGGTCATG 226 ********************************************** ************* consensus_2847#0 CTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACC 300 consensus_2847#1 CTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGCAGCTCATGAAAACTGACACC 264 consensus_2847#2 CTGGGAGAACACGACGTGCGTGTGTTTGAGGGCACCGAGGAGGTCATGAAAACTGACACC 286 *************************************** ** ***************** consensus_2847#0 ATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAG 360 consensus_2847#1 ATCATCTGGCATCCCGACTACGACTACCAGACTCTGGACCATGACATCATGCTGATAAAG 324 consensus_2847#2 ATCATCTGGCATCCCGAGTGAG-CAGAAATATTCCAATTCCTGTGTTTGCATTA------ 339 ***************** * * * * * ** * ** * * consensus_2847#0 CTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGT 420 consensus_2847#1 CTTTTCCACCCAGTGGAGGTGACAGAGTCAGTGGCACCCATCTCTCTGCCCACAGGGTGT 384 consensus_2847#2 -TTTTACAAATAACAGAT-TTATTGACTCGGTAGTGCAAAAGTAGC--------GAATGT 389 **** ** * ** * * ** ** ** * * * * * * *** consensus_2847#0 CCCTACGGGGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGAC 480 consensus_2847#1 CCCTACGGNGGCATGCCCTGCTCTGTGTCTGGCTGGGGTAACACCGCCAGTAGTGGCGAC 444 consensus_2847#2 GTGATTAAAAGCTTTTACTG---------------------------------------- 409 ** * *** consensus_2847#0 GCCATCATGCCCAACCGTCTGCAGTGCTTGGACGTCCCGGCAGTGAGTAACGAGGACTGT 540 consensus_2847#1 GTCA--ACACTGACTGACCTGCGCTACCACGCTACCATGAAAACGGACCCTGTAAAGAAT 502 consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 GAAAAGGCCTATCCCGGCATGATCACACGCAGGATGGTGTGTGCTGGATACATGGATGGA 600 consensus_2847#1 GTGGCCGCCTCTCTTGCAGCCATCATGCCCA--ACCGTCTGCAGTGCTTGGACG--TCCC 558 consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 GGCAGAGACGCTTGTAACGGAGACTCCGGCAGCCCCCTGGTGTGTTTTGGAGAAGTCCAA 660 consensus_2847#1 GGCAGTGA-----GTAAC------------------------------------------ 571 consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 GGACTGGTGTCGTGGGGGCAGGGATGTGCCCTTCCCGAGTATCCTGGAGTCTACGTTAAA 720 consensus_2847#1 ------------------------------------------------------------ consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 GTCTGTGAATTCCTCTACTGGATTGAAGACGTCCTACAGACCTACTCCTAAAGAAATCAC 780 consensus_2847#1 ------------------------------------------------------------ consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 CCAGTCTTCCATCCTCTCTCTGTGGTTTGGTTTTTCTCTGGCAACTTTTTCAAGTTTCCA 840 consensus_2847#1 ------------------------------------------------------------ consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 CCTCATAAAAACACAGAATGGCAAATCAAAACAGGCCATTTGATCTCTCTTCATTTTGCC 900 consensus_2847#1 ------------------------------------------------------------ consensus_2847#2 ------------------------------------------------------------ consensus_2847#0 GTCCTTCATCTTAATAACAGGTGATGATAAAGCAACAGATACTTTCAA 948 consensus_2847#1 ------------------------------------------------ consensus_2847#2 ------------------------------------------------ |
Data build on Sat Aug 9 00:50:02 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |